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List of works by Pär G Engström

A high-content small molecule screen identifies sensitivity of glioblastoma stem cells to inhibition of polo-like kinase 1

scientific article (publication date: 2013)

Ancora: a web resource for exploring highly conserved noncoding elements and their association with developmental regulatory genes

scientific article published on 15 February 2008

Antisense transcription in the mammalian transcriptome

scientific article (publication date: 2 September 2005)

Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes

scientific article

Assessment of transcript reconstruction methods for RNA-seq

scientific article

Complex Loci in human and mouse genomes

scientific article

Corrigendum: Genome-wide analysis of mammalian promoter architecture and evolution

scholarly article published in Nature Genetics

Current chemotherapy protocols for childhood acute lymphoblastic leukemia induce loss of humoral immunity to viral vaccination antigens

scientific article published in June 2002

Digital transcriptome profiling of normal and glioblastoma-derived neural stem cells identifies genes associated with patient survival

scientific article published on 9 October 2012

Exploring hepatic hormone actions using a compilation of gene expression profiles

scientific article

Genome-wide analysis of mammalian promoter architecture and evolution

scientific article (publication date: June 2006)

Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates

scientific article published on 26 March 2007

Genomic regulatory blocks underlie extensive microsynteny conservation in insects

scientific article

Identification of conserved regulatory elements by comparative genome analysis

scientific article

Identification of functional SNPs in the 5-prime flanking sequences of human genes

scientific article

In silico detection of sequence variations modifying transcriptional regulation

scientific article

JASPAR: an open-access database for eukaryotic transcription factor binding profiles

scientific article (publication date: 2004)

Long-range gene regulation links genomic type 2 diabetes and obesity risk regions to HHEX, SOX4, and IRX3

scientific article

Mammalian microRNA prediction through a support vector machine model of sequence and structure

scientific article

Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis

scientific article

RNAdb 2.0--an expanded database of mammalian non-coding RNAs

scientific article published on December 2006

RNAdb--a comprehensive mammalian noncoding RNA database

scientific article

RNAi screen indicates widespread biological function for human natural antisense transcripts

scientific article

Systematic evaluation of spliced alignment programs for RNA-seq data

scientific article

The non-coding snRNA 7SK controls transcriptional termination, poising, and bidirectionality in embryonic stem cells

scientific article published on January 2013

The role of germline alterations in the DNA damage response genes BRIP1 and BRCA2 in melanoma susceptibility

scientific article

The transcriptional landscape of the mammalian genome

scientific article

The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.

scientific article

Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

scientific article published in April 2006

Web-based tools and approaches to study long-range gene regulation in Metazoa

scientific article published on 15 July 2009

Widespread resetting of DNA methylation in glioblastoma-initiating cells suppresses malignant cellular behavior in a lineage-dependent manner

scientific article published on March 2013

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