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List of works by Jochen C. Reif

A new test for family-based association mapping with inbred lines from plant breeding programs

article

A quantitative genetic framework highlights the role of epistatic effects for grain-yield heterosis in bread wheat

scientific article published on 16 October 2017

Accuracy of genomic selection in European maize elite breeding populations

scientific article published on 11 November 2011

Advantages and limitations of multiple-trait genomic prediction for Fusarium head blight severity in hybrid wheat (Triticum aestivum L.).

scientific article published on 2 December 2017

Association between line per se and testcross performance for eight agronomic and quality traits in winter rye.

scientific article published on 27 September 2013

Association mapping for quality traits in soft winter wheat

scientific article

Association mapping in an elite maize breeding population

scientific article published on 17 June 2011

Association mapping of wheat Fusarium head blight resistance-related regions using a candidate-gene approach and their verification in a biparental population

scientific article published on 23 October 2019

Association of single nucleotide polymorphic sites in candidate genes with aggressiveness and deoxynivalenol production in Fusarium graminearum causing wheat head blight ⬇️

scientific article published on March 12, 2012

Biparental resequencing coupled with SNP genotyping of a segregating population offers insights into the landscape of recombination and fixed genomic regions in elite soybean

scientific article

BreedVision — A Multi-Sensor Platform for Non-Destructive Field-Based Phenotyping in Plant Breeding ⬇️

scientific article published on February 27, 2013

Bridging the gap between marker-assisted and genomic selection of heading time and plant height in hybrid wheat

scientific article

Broadening the genetic base of European maize heterotic pools with US Cornbelt germplasm using field and molecular marker data

scientific article

Chilling tolerance of Central European maize lines and their factorial crosses.

scientific article published on 18 September 2007

Choosing the right tool: Leveraging of plant genetic resources in wheat (Triticum aestivum L.) benefits from selection of a suitable genomic prediction model

scientific article published in 2022

Comparison of biometrical approaches for QTL detection in multiple segregating families.

scientific article published on 23 May 2012

Comparison of biometrical models for joint linkage association mapping

scientific article published on 31 August 2011

Detecting SNPs underlying domestication-related traits in soybean.

scientific article

Detection of QTL for flowering time in multiple families of elite maize

scientific article published on 17 July 2012

Detection of segregation distortion loci in triticale (x Triticosecale Wittmack) based on a high-density DArT marker consensus genetic linkage map

scientific article

Dissecting the Genetic Basis of Resistance to Soybean Cyst Nematode Combining Linkage and Association Mapping.

scientific article

Dissecting the genetic architecture of agronomic traits in multiple segregating populations in rapeseed (Brassica napus L.).

scientific article published on 06 September 2011

Dissecting the genetic architecture of frost tolerance in Central European winter wheat

scientific article published on 04 September 2013

Dissecting the genetics underlying the relationship between protein content and grain yield in a large hybrid wheat population

scientific article published on 19 November 2018

Effect of inter- and intragenic epistasis on the heritability of oil content in rapeseed (Brassica napus L.).

scientific article published on 06 October 2012

Efficient strategies to assess yield stability in winter wheat

scientific article

Enabling reusability of plant phenomic datasets with MIAPPE 1.1.

scientific article published on 14 March 2020

Exploitation of yield stability in barley

scientific article published on 24 July 2014

Exploiting the Rht portfolio for hybrid wheat breeding

scientific article published on 19 March 2018

Extent and genome-wide distribution of linkage disequilibrium in commercial maize germplasm

scientific article published on 15 March 2011

Extracting genotype information of Arabidopsis thaliana recombinant inbred lines from transcript profiles established with high-density oligonucleotide arrays.

scientific article published on 30 August 2017

First insights into the genotype-phenotype map of phenotypic stability in rye

scientific article

First insights into the quantitative genetic composition of the female seed yield for an efficient hybrid seed production in wheat (<scp><i>Triticum aestivum</i></scp> L.)

scientific article published in 2024

Genebank genomics bridges the gap between the conservation of crop diversity and plant breeding

scientific article published on 28 June 2019

Genebank genomics highlights the diversity of a global barley collection

scientific article published on 12 November 2018

Genetic architecture and temporal patterns of biomass accumulation in spring barley revealed by image analysis

scientific article published on 10 August 2017

Genetic architecture is more complex for resistance to Septoria tritici blotch than to Fusarium head blight in Central European winter wheat

scientific article published on 5 June 2015

Genetic architecture of complex agronomic traits examined in two testcross populations of rye (Secale cereale L.).

scientific article published on 17 December 2012

Genetic architecture of resistance to Septoria tritici blotch in European wheat

scientific article

Genetic basis of agronomically important traits in sugar beet (Beta vulgaris L.) investigated with joint linkage association mapping

scientific article published on 18 July 2010

Genetic dissection of agronomic and quality traits based on association mapping and genomic selection approaches in durum wheat grown in Southern Spain

article

Genetic dynamics underlying phenotypic development of biomass yield in triticale

scientific article

Genetic structure and diversity of European flint maize populations determined with SSR analyses of individuals and bulks

scientific article published on 01 September 2005

Genetic variation of growth dynamics in maize (Zea mays L.) revealed through automated non-invasive phenotyping

scientific article

Genome-Based Identification of Heterotic Patterns in Rice.

scientific article

Genome-Wide Prediction of the Performance of Three-Way Hybrids in Barley.

scientific article published on March 2017

Genome-based establishment of a high-yielding heterotic pattern for hybrid wheat breeding

scientific article

Genome-metabolite associations revealed low heritability, high genetic complexity, and causal relations for leaf metabolites in winter wheat (Triticum aestivum).

scientific article published on 22 December 2016

Genome-wide association analyses of plant growth traits during the stem elongation phase in wheat

article

Genome-wide association mapping of QTL underlying seed oil and protein contents of a diverse panel of soybean accessions.

scientific article

Genome-wide association mapping of agronomic traits in sugar beet

scientific article published on 15 July 2011

Genome-wide association mapping reveals epistasis and genetic interaction networks in sugar beet

scientific article published on 30 March 2011

Genome-wide mapping and prediction suggests presence of local epistasis in a vast elite winter wheat populations adapted to Central Europe

scientific article published on 19 December 2016

Genomic Prediction of Barley Hybrid Performance.

scientific article published on July 2016

Genomic prediction models trained with historical records enable populating the German ex situ genebank bio-digital resource center of barley (Hordeum sp.) with information on resistances to soilborne barley mosaic viruses

scientific article published in 2021

Genomic selection in a commercial winter wheat population

scientific article published on 8 January 2016

Genomic selection in sugar beet breeding populations

scientific article

Grouping of accessions of Mexican races of maize revisited with SSR markers

scientific article published on 22 April 2006

Haplotype-Based Genome-Wide Prediction Models Exploit Local Epistatic Interactions Among Markers.

scientific article published on 16 March 2018

Heritable microbiome variation is correlated with source environment in locally adapted maize varieties

scientific article published in 2024

Heterosis in crop improvement

scientific article published in 2023

High accuracy of predicting hybrid performance of Fusarium head blight resistance by mid-parent values in wheat

scientific article published on 19 November 2016

Historical phenotypic data from seven decades of seed regeneration in a wheat ex situ collection

scientific article published on 29 July 2019

Hybrid Performance of an Immortalized F2 Rapeseed Population Is Driven by Additive, Dominance, and Epistatic Effects

scientific article

Hybrid breeding in wheat: technologies to improve hybrid wheat seed production

scientific article (publication date: December 2013)

Hybrid maize breeding with doubled haploids. IV. Number versus size of crosses and importance of parental selection in two-stage selection for testcross performance

scientific article published on 26 April 2008

Hybrid maize breeding with doubled haploids: I. One-stage versus two-stage selection for testcross performance

scientific article published on 25 January 2006

Hybrid maize breeding with doubled haploids: II. Optimum type and number of testers in two-stage selection for general combining ability

scientific article published on 16 December 2006

Hybrid maize breeding with doubled haploids: III. Efficiency of early testing prior to doubled haploid production in two-stage selection for testcross performance

scientific article published on 29 June 2007

Hybrid rye performance under natural drought stress in Europe ⬇️

scientific article published on October 23, 2012

Hybrid wheat: quantitative genetic parameters and consequences for the design of breeding programs

scientific article

Identification of QTL hot spots for malting quality in two elite breeding lines with distinct tolerance to abiotic stress.

scientific article published on 4 June 2018

Identification of novel genetic factors underlying the host-pathogen interaction between barley (Hordeum vulgare L.) and powdery mildew (Blumeria graminis f. sp. hordei)

scientific article published on 02 July 2020

Impact of interpopulation divergence on additive and dominance variance in hybrid populations.

scientific article published on 16 May 2007

Impact of selective genotyping in the training population on accuracy and bias of genomic selection

scientific article published on 6 April 2012

Leveraging the Use of Historical Data Gathered During Seed Regeneration of an ex Situ Genebank Collection of Wheat.

scientific article published on 8 May 2018

Linkage disequilibrium in European elite maize germplasm investigated with SSRs

scientific article published on 05 July 2005

Long-term perspective of hybrid versus line breeding in wheat based on quantitative genetic theory

scientific article published on 21 May 2014

Manipulation and prediction of spike morphology traits for the improvement of grain yield in wheat

scientific article published in Scientific Reports

Mapping QTLs for root system architecture of maize (Zea mays L.) in the field at different developmental stages

scientific article published on 21 June 2012

Mapping QTLs with main and epistatic effects underlying grain yield and heading time in soft winter wheat

scientific article published on 08 April 2011

Mapping dynamic QTL for plant height in triticale.

scientific article

Maximization through optimization? On the relationship between hybrid performance and parental genetic distance

scientific article published in 2023

Meeting the Challenges Facing Wheat Production: The Strategic Research Agenda of the Global Wheat Initiative

scientific article published on 7 November 2022

Modeling Epistasis in Genomic Selection.

scientific article published on 27 July 2015

Modelling the genetic architecture of flowering time control in barley through nested association mapping

scientific article published on 12 April 2015

Molecular footprints of domestication and improvement in soybean revealed by whole genome re-sequencing

scientific article

Molecular marker assisted broadening of the Central European heterotic groups in rye with Eastern European germplasm

scientific article published on January 2010

Multiple-line cross QTL mapping for biomass yield and plant height in triticale (× Triticosecale Wittmack).

scientific article

Multiple-trait- and selection indices-genomic predictions for grain yield and protein content in rye for feeding purposes.

scientific article published on 3 November 2015

Negative dominance and dominance-by-dominance epistatic effects reduce grain-yield heterosis in wide crosses in wheat

scientific article published on 12 June 2020

Novel throughput phenotyping platforms in plant genetic studies

article

Optimum allocation of test resources and comparison of breeding strategies for hybrid wheat

scientific article published on 8 August 2014

Optimum design of family structure and allocation of resources in association mapping with lines from multiple crosses.

scientific article published on 10 October 2012

Origin and evolution of the bread wheat D genome

scientific article published in 2024

Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments.

scientific article

Population structure, genetic diversity and linkage disequilibrium in elite winter wheat assessed with SNP and SSR markers

scientific article

Potential and limits of whole genome prediction of resistance to Fusarium head blight and Septoria tritici blotch in a vast Central European elite winter wheat population.

scientific article published on 8 September 2015

Potential and limits to unravel the genetic architecture and predict the variation of Fusarium head blight resistance in European winter wheat (Triticum aestivum L.)

scientific article

Potential causes of linkage disequilibrium in a European maize breeding program investigated with computer simulations

scientific article published on 28 June 2007

Potential of marker selection to increase prediction accuracy of genomic selection in soybean (Glycine max L.).

scientific article published on 28 July 2016

Precision phenotyping of biomass accumulation in triticale reveals temporal genetic patterns of regulation

scientific article published on January 2013

Predicting Hybrid Performances for Quality Traits through Genomic-Assisted Approaches in Central European Wheat

scientific article

Prospects and limits of marker imputation in quantitative genetic studies in European elite wheat (Triticum aestivum L.).

scientific article published on 11 March 2015

Reciprocal recurrent genomic selection: an attractive tool to leverage hybrid wheat breeding

scientific article published on 28 November 2018

Redesigning the exploitation of wheat genetic resources

scientific article published on 20 July 2014

Seed Quality Traits Can Be Predicted with High Accuracy in Brassica napus Using Genomic Data

scientific article

Targeted association mapping demonstrating the complex molecular genetics of fatty acid formation in soybean.

scientific article

The accuracy of prediction of genomic selection in elite hybrid rye populations surpasses the accuracy of marker-assisted selection and is equally augmented by multiple field evaluation locations and test years.

scientific article

The roles of pleiotropy and close linkage as revealed by association mapping of yield and correlated traits of wheat (Triticum aestivum L.).

scientific article published in July 2017

Trends in genetic diversity among European maize cultivars and their parental components during the past 50 years

scientific article published on 01 September 2005

Unbalanced historical phenotypic data from seed regeneration of a barley ex situ collection

scientific article published on 04 December 2018

Unlocking historical phenotypic data from an ex situ collection to enhance the informed utilization of genetic resources of barley (Hordeum sp.).

scientific article published on 29 June 2018

Unlocking the genetic diversity of maize landraces with doubled haploids opens new avenues for breeding

scientific article

Unraveling epistasis with triple testcross progenies of near-isogenic lines

scientific article

Use of SSRs for establishing heterotic groups in subtropical maize

scientific article

Use of genotyping-by-sequencing to determine the genetic structure in the medicinal plant chamomile, and to identify flowering time and alpha-bisabolol associated SNP-loci by genome-wide association mapping.

scientific article published on 10 August 2017

Validating the prediction accuracies of marker-assisted and genomic selection of Fusarium head blight resistance in wheat using an independent sample.

scientific article published on 17 November 2016

Wheat genetic diversity trends during domestication and breeding

scientific article published on 03 February 2005

Yield performance and stability of CMS-based triticale hybrids

scientific article published on 16 December 2014

Yield stability of hybrids versus lines in wheat, barley, and triticale

scientific article

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