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List of works by Maciek R Antoniewicz

(13)C metabolic flux analysis of the extremely thermophilic, fast growing, xylose-utilizing Geobacillus strain LC300.

scientific article

(13)C-metabolic flux analysis of co-cultures: A novel approach

scientific article

13C metabolic flux analysis of microbial and mammalian systems is enhanced with GC-MS measurements of glycogen and RNA labeling

scientific article published on 22 June 2016

13C metabolic flux analysis: optimal design of isotopic labeling experiments.

scientific article published on 28 February 2013

A roadmap for interpreting (13)C metabolite labeling patterns from cells

scientific article

Accurate assessment of amino acid mass isotopomer distributions for metabolic flux analysis

scientific article published on 7 September 2007

Adaptive laboratory evolution of methylotrophic Escherichia coli enables synthesis of all amino acids from methanol-derived carbon

scientific article published in 2021

An elementary metabolite unit (EMU) based method of isotopically nonstationary flux analysis

scientific article published in February 2008

CO2 fixation by anaerobic non-photosynthetic mixotrophy for improved carbon conversion.

scientific article published on 30 September 2016

COMPLETE-MFA: complementary parallel labeling experiments technique for metabolic flux analysis.

scientific article

Catabolism of Branched Chain Amino Acids Contributes Significantly to Synthesis of Odd-Chain and Even-Chain Fatty Acids in 3T3-L1 Adipocytes

scientific article published on 28 December 2015

Central metabolic responses to the overproduction of fatty acids in Escherichia coli based on 13C-metabolic flux analysis

scientific article

Characterization of physiological responses to 22 gene knockouts in Escherichia coli central carbon metabolism

scientific article

Co-utilization of glucose and xylose by evolved Thermus thermophilus LC113 strain elucidated by (13)C metabolic flux analysis and whole genome sequencing

scientific article published on 7 May 2016

Complete genome sequence, metabolic model construction and phenotypic characterization of Geobacillus LC300, an extremely thermophilic, fast growing, xylose-utilizing bacterium

scientific article published on 18 September 2015

Comprehensive metabolic modeling of multiple 13C-isotopomer data sets to study metabolism in perfused working hearts

scientific article

Computational approaches in metabolic engineering

scientific article published on January 2010

Determination of confidence intervals of metabolic fluxes estimated from stable isotope measurements

scientific article

Dissecting the genetic and metabolic mechanisms of adaptation to the knockout of a major metabolic enzyme in Escherichia coli

scientific article published on 18 December 2017

Dynamic metabolic flux analysis (DMFA): a framework for determining fluxes at metabolic non-steady state

scientific article published on 6 October 2011

Dynamic metabolic flux analysis--tools for probing transient states of metabolic networks.

scientific article published on 20 April 2013

Elementary metabolite units (EMU): a novel framework for modeling isotopic distributions

scientific article published on 17 September 2006

Energetics of growth and penicillin production in a high-producing strain of Penicillium chrysogenum

scientific article published in January 2001

Evaluation of regression models in metabolic physiology: predicting fluxes from isotopic data without knowledge of the pathway

scientific article

Evidence for transketolase-like TKTL1 flux in CHO cells based on parallel labeling experiments and (13)C-metabolic flux analysis

scientific article published on 9 May 2016

Evolution of E. coli on [U-13C]Glucose Reveals a Negligible Isotopic Influence on Metabolism and Physiology

scientific article

Fast growth phenotype of E. coli K-12 from adaptive laboratory evolution does not require intracellular flux rewiring

scientific article published on 23 September 2017

Genome-Scale Metabolic Model for the Green Alga Chlorella vulgaris UTEX 395 Accurately Predicts Phenotypes under Autotrophic, Heterotrophic, and Mixotrophic Growth Conditions.

scientific article published on 2 July 2016

Heterotrophic bacteria from an extremely phosphate-poor lake have conditionally reduced phosphorus demand and utilize diverse sources of phosphorus

scientific article published on 28 September 2015

High-resolution 13C metabolic flux analysis

scientific article published on 30 August 2019

Integrated 13C-metabolic flux analysis of 14 parallel labeling experiments in Escherichia coli

scientific article published on 14 January 2015

Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p

scholarly article

Measuring complete isotopomer distribution of aspartate using gas chromatography/tandem mass spectrometry

scientific article published on 03 May 2012

Measuring deuterium enrichment of glucose hydrogen atoms by gas chromatography/mass spectrometry

scientific article published on 17 March 2011

Measuring the Composition and Stable-Isotope Labeling of Algal Biomass Carbohydrates via Gas Chromatography/Mass Spectrometry

scientific article published on 4 April 2016

Metabolic flux analysis in a nonstationary system: fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol

scientific article published on 23 February 2007

Metabolic flux analysis of CHO cells at growth and non-growth phases using isotopic tracers and mass spectrometry

scientific article

Metabolic flux analysis of Escherichia coli knockouts: lessons from the Keio collection and future outlook

scientific article published on 28 March 2014

Metabolic network reconstruction, growth characterization and 13C-metabolic flux analysis of the extremophile Thermus thermophilus HB8.

scientific article published on 5 June 2014

Methods and advances in metabolic flux analysis: a mini-review.

scientific article

Optimal tracers for parallel labeling experiments and (13)C metabolic flux analysis: A new precision and synergy scoring system

scientific article

Parallel labeling experiments and metabolic flux analysis: Past, present and future methodologies

scientific article published on 14 December 2012

Parallel labeling experiments for pathway elucidation and (13)C metabolic flux analysis.

scientific article published on 28 August 2015

Parallel labeling experiments validate Clostridium acetobutylicum metabolic network model for (13)C metabolic flux analysis.

scientific article published on 23 August 2014

Parallel labeling experiments with [1,2-(13)C]glucose and [U-(13)C]glutamine provide new insights into CHO cell metabolism

scientific article published on 27 October 2012

Parallel labeling experiments with [U-13C]glucose validate E. coli metabolic network model for 13C metabolic flux analysis

scientific article published on 6 July 2012

Publishing 13C metabolic flux analysis studies: a review and future perspectives

scientific article published on 08 September 2013

Quantifying biomass composition by gas chromatography/mass spectrometry

scientific article

Quantifying reductive carboxylation flux of glutamine to lipid in a brown adipocyte cell line

scientific article published on 25 March 2008

Rational design of 13C-labeling experiments for metabolic flux analysis in mammalian cells ⬇️

scientific article published on May 16, 2012

Regulatory interventions improve the biosynthesis of limiting amino acids from methanol carbon to improve synthetic methylotrophy in Escherichia coli

scientific article published on 02 September 2020

Resolving the TCA cycle and pentose-phosphate pathway of Clostridium acetobutylicum ATCC 824: Isotopomer analysis, in vitro activities and expression analysis.

scientific article published on 4 November 2010

Selection of tracers for 13C-metabolic flux analysis using elementary metabolite units (EMU) basis vector methodology

scientific article published on 22 December 2011

Tandem mass spectrometry for measuring stable-isotope labeling.

scientific article

Tandem mass spectrometry: a novel approach for metabolic flux analysis

scientific article published on 04 December 2010

Using Multiple Tracers for 13C Metabolic Flux Analysis ⬇️

scientific article published on January 1, 2013

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