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List of works by Elena Ilina

Analysis of nosocomial Staphylococcus haemolyticus by MLST and MALDI-TOF mass spectrometry.

scientific article published on 23 December 2015

Application of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the study of Helicobacter pylori

scientific article

Chromosome 18 Transcriptome Profiling and Targeted Proteome Mapping in Depleted Plasma, Liver Tissue and HepG2 Cells

scientific article published on 20 December 2012

Chromosome 18 transcriptoproteome of liver tissue and HepG2 cells and targeted proteome mapping in depleted plasma: update 2013.

scientific article published on 13 December 2013

Comparative evaluation of new typing schemes for urogenital Chlamydia trachomatis isolates

scientific article published on 07 April 2010

Comparative genomic analysis of Mycobacterium tuberculosis drug resistant strains from Russia

scientific article

Correction for Sotnikova et al., Complete Genome Sequence of Mycobacterium bovis Strain BCG-1 (Russia).

scientific article

Data on gut metagenomes of the patients with Helicobacter pylori infection before and after the antibiotic therapy

scientific article

Data on gut metagenomes of the patients with alcoholic dependence syndrome and alcoholic liver cirrhosis.

scientific article

Direct Matrix-Assisted Laser Desorption-Ionisation (MALDI) Mass-Spectrometry Bacteria Profiling for Identifying and Characterizing Pathogens.

scientific article

Direct bacterial profiling by matrix-assisted laser desorption-ionization time-of-flight mass spectrometry for identification of pathogenic Neisseria

scientific article

Discrimination between Streptococcus pneumoniae and Streptococcus mitis based on sorting of their MALDI mass spectra ⬇️

scientific article published on January 17, 2013

Draft genomes of Enterococcus faecium strains isolated from human feces before and after eradication therapy against Helicobacter pylori.

scientific article published on 27 November 2017

Emergence of carbapenemase-producing Gram-negative bacteria in Saint Petersburg, Russia.

scientific article published on 12 June 2014

Evolutionary pathway analysis and unified classification of East Asian lineage of Mycobacterium tuberculosis.

scientific article

First detection of VIM-4 metallo-β-lactamase-producing Escherichia coli in Russia.

scientific article published on 4 April 2012

Fluoroquinolone-resistant Neisseria gonorrhoeae isolates from Russia: molecular mechanisms implicated.

scientific article published on 3 March 2004

Genetic Environment of the blaKPC-2 Gene in a Klebsiella pneumoniae Isolate That May Have Been Imported to Russia from Southeast Asia

scientific article published on 05 December 2016

Genome Complexity Browser: Visualization and quantification of genome variability

scientific article published on 09 October 2020

Genome analysis of E. coli isolated from Crohn's disease patients

scientific article

Genome-wide Mycobacterium tuberculosis variation (GMTV) database: a new tool for integrating sequence variations and epidemiology

scientific article

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

scientific article published on 08 July 2019

High interlaboratory reproducibility of matrix-assisted laser desorption ionization-time of flight mass spectrometry-based species identification of nonfermenting bacteria.

scientific article published on 23 September 2009

Identification of Clinically Significant Prostate Cancer by Combined PCA3 and AMACR mRNA Detection in Urine Samples

scientific article published on 17 September 2020

Influence of cultivation conditions on the proteomic profile of Mycobacterium tuberculosis H37RV

scientific article published in July 2017

Inhibitory effect of streptococci on the growth of M. catarrhalis strains and the diversity of putative bacteriocin-like gene loci in the genomes of S. pneumoniae and its relatives

scientific article published on 13 December 2017

Large scale analysis of amino acid substitutions in bacterial proteomics

scientific article

Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease

scientific article published on 17 October 2017

Long-term dissemination of CTX-M-5-producing hypermutable Salmonella enterica serovar typhimurium sequence type 328 strains in Russia, Belarus, and Kazakhstan

scientific article

Mass spectrometry based methods for the discrimination and typing of mycobacteria.

scientific article

Mass-spectrometry based minisequencing method for the rapid detection of drug resistance in Mycobacterium tuberculosis

scientific article

Matrix-Assisted Laser Desorption Ionization-Time of Flight (Mass Spectrometry) for Hepatitis C Virus Genotyping

scientific article (publication date: June 2005)

Metagenomic analysis of taxonomic and functional changes in gut microbiota of patients with alcoholic dependence syndrome

scientific article published on 01 November 2015

Microfluidic droplet platform for ultrahigh-throughput single-cell screening of biodiversity

scientific article

Molecular surveillance of clinical Neisseria gonorrhoeae isolates in Russia

scientific article

Multiple-locus variable number tandem repeat analysis of Neisseria gonorrhoeae isolates in Russia

scientific article published on 19 December 2012

Mutation in ribosomal protein S5 leads to spectinomycin resistance in Neisseria gonorrhoeae.

scientific article published on 10 July 2013

Proteogenomic analysis of Mycobacterium tuberculosis Beijing B0/W148 cluster strains.

scientific article published on 24 July 2018

Proteome analysis of the Mycobacterium tuberculosis Beijing B0/W148 cluster

scientific article published on 30 June 2016

RNA-Seq gene expression profiling of HepG2 cells: the influence of experimental factors and comparison with liver tissue.

scientific article

Relation between genetic markers of drug resistance and susceptibility profile of clinical Neisseria gonorrhoeae strains

scientific article

Spoligotyping of Mycobacterium tuberculosis complex isolates using hydrogel oligonucleotide microarrays

scientific article published on 9 May 2014

State of the Art of Chromosome 18-Centric HPP in 2016: Transcriptome and Proteome Profiling of Liver Tissue and HepG2 Cells.

scientific article published on 16 August 2016

The mystery of the fourth clone: comparative genomic analysis of four non-typeable Streptococcus pneumoniae strains with different susceptibilities to optochin.

scientific article

Ultrahigh-throughput functional profiling of microbiota communities

article published in the Proceedings of the National Academy of Sciences of the United States of America

Unusual large-scale chromosomal rearrangements in Mycobacterium tuberculosis Beijing B0/W148 cluster isolates

scientific article (publication date: 2014)

[Antibiotic resistance of Helicobacter pylori in the European part of the Russian Federation: first results]

scientific article published on 03 September 2020

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