List of works - Alexander Tyakht

Agent Based Modeling of Human Gut Microbiome Interactions and Perturbations.

scientific article

Application of Spiroplasma melliferum proteogenomic profiling for the discovery of virulence factors and pathogenicity mechanisms in host-associated spiroplasmas.

scientific article published on 16 December 2011

Approximation of a Microbiome Composition Shift by a Change in a Single Balance Between Two Groups of Taxa

scientific article published in 2022

Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis

scientific article published on 16 January 2016

Association between the gut microbiota and diet: Fetal life, early childhood, and further life.

scientific article

Bacterial rose garden for metagenomic SNP-based phylogeny visualization.

scientific article

Chromosome 18 Transcriptome Profiling and Targeted Proteome Mapping in Depleted Plasma, Liver Tissue and HepG2 Cells

scientific article published on 20 December 2012

Chromosome 18 transcriptoproteome of liver tissue and HepG2 cells and targeted proteome mapping in depleted plasma: update 2013.

scientific article published on 13 December 2013

Genetic diversity of Escherichia coli in gut microbiota of patients with Crohn's disease discovered using metagenomic and genomic analyses

scientific article published on 27 December 2018

Gut microbiome signature of Viliuisk encephalomyelitis in Yakuts includes an increase in microbes linked to lean body mass and eating behaviour

scientific article published on 20 November 2020

Human Gut Microbiome Response Induced by Fermented Dairy Product Intake in Healthy Volunteers

scientific article published on 04 March 2019

Human gut microbiota community structures in urban and rural populations in Russia

scientific article

Knomics-Biota - a system for exploratory analysis of human gut microbiota data

scholarly article by Daria Efimova published in January 2018

MALINA: a web service for visual analytics of human gut microbiota whole-genome metagenomic reads.

scientific article

MetaFast: fast reference-free graph-based comparison of shotgun metagenomic data

scientific article

Metagenomic analysis of taxonomic and functional changes in gut microbiota of patients with alcoholic dependence syndrome

scientific article published on 01 November 2015

Microbiome-Metabolome Signature of Acute Kidney Injury

scientific article published on 04 April 2020

RNA-Seq gene expression profiling of HepG2 cells: the influence of experimental factors and comparison with liver tissue.

scientific article

Rural and urban microbiota: To be or not to be?

scientific article

State of the Art of Chromosome 18-Centric HPP in 2016: Transcriptome and Proteome Profiling of Liver Tissue and HepG2 Cells.

scientific article published on 16 August 2016

List of works by Alexander Tyakht

Agent Based Modeling of Human Gut Microbiome Interactions and Perturbations.

Application of Spiroplasma melliferum proteogenomic profiling for the discovery of virulence factors and pathogenicity mechanisms in host-associated spiroplasmas.

Approximation of a Microbiome Composition Shift by a Change in a Single Balance Between Two Groups of Taxa

Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis

Association between the gut microbiota and diet: Fetal life, early childhood, and further life.

Bacterial rose garden for metagenomic SNP-based phylogeny visualization.

Chromosome 18 Transcriptome Profiling and Targeted Proteome Mapping in Depleted Plasma, Liver Tissue and HepG2 Cells

Chromosome 18 transcriptoproteome of liver tissue and HepG2 cells and targeted proteome mapping in depleted plasma: update 2013.

Genetic diversity of Escherichia coli in gut microbiota of patients with Crohn's disease discovered using metagenomic and genomic analyses

Gut microbiome signature of Viliuisk encephalomyelitis in Yakuts includes an increase in microbes linked to lean body mass and eating behaviour

Human Gut Microbiome Response Induced by Fermented Dairy Product Intake in Healthy Volunteers

Human gut microbiota community structures in urban and rural populations in Russia

Knomics-Biota - a system for exploratory analysis of human gut microbiota data

MALINA: a web service for visual analytics of human gut microbiota whole-genome metagenomic reads.

MetaFast: fast reference-free graph-based comparison of shotgun metagenomic data

Metagenomic analysis of taxonomic and functional changes in gut microbiota of patients with alcoholic dependence syndrome

Microbiome-Metabolome Signature of Acute Kidney Injury

RNA-Seq gene expression profiling of HepG2 cells: the influence of experimental factors and comparison with liver tissue.

Rural and urban microbiota: To be or not to be?

State of the Art of Chromosome 18-Centric HPP in 2016: Transcriptome and Proteome Profiling of Liver Tissue and HepG2 Cells.