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List of works by Vasanth R. Singan

A 5-Enolpyruvylshikimate 3-Phosphate Synthase Functions as a Transcriptional Repressor in Populus

scientific article published on 11 June 2018

A Variable Polyglutamine Repeat Affects Subcellular Localization and Regulatory Activity of a ANGUSTIFOLIA Protein

scientific article published on 31 July 2018

A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism

scientific article

A method for improved clustering and classification of microscopy images using quantitative co-localization coefficients ⬇️

scientific article published on June 8, 2012

Association mapping, transcriptomics, and transient expression identify candidate genes mediating plant-pathogen interactions in a tree

article published in the Proceedings of the National Academy of Sciences of the United States of America

Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities

scientific article published in 2022

Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales.

scientific article

Correction: Transgenic expression of the dicotyledonous pattern recognition receptor EFR in rice leads to ligand-dependent activation of defense responses

scientific article published on 23 April 2015

Dichomitus squalens partially tailors its molecular responses to the composition of solid wood

scientific article published on 18 October 2018

Dual channel rank-based intensity weighting for quantitative co-localization of microscopy images.

scientific article

Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments

scientific article

Feathermoss and epiphytic Nostoc cooperate differently: expanding the spectrum of plant-cyanobacteria symbiosis

scientific article published on 11 August 2017

Fungal and plant gene expression in the Tulasnella calospora-Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas

scientific article published on 11 November 2016

Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics

scientific article published on 07 January 2020

Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica ⬇️

scientific article

Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale

scientific article published on 23 October 2020

Genome-wide RNAi screening identifies human proteins with a regulatory function in the early secretory pathway

Genome-wide association studies and expression-based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense-responsive transcription factors in Populus

scientific article published on 11 July 2018

Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass

scientific article published on 27 January 2021

Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors

scientific article published on 29 July 2020

Immunofluorescence and fluorescent-protein tagging show high correlation for protein localization in mammalian cells

article

Implementation of the Rank-Weighted Co-localization (RWC) algorithm in multiple image analysis platforms for quantitative analysis of microscopy images

scientific article published on 16 February 2016

Inorganic nitrogen availability alters Eucalyptus grandis receptivity to the ectomycorrhizal fungus Pisolithus albus but not symbiotic nitrogen transfer

scientific article published on 17 December 2019

Overexpression of a Prefoldin β subunit gene reduces biomass recalcitrance in the bioenergy crop Populus

scientific article published on 27 September 2019

Quantitative image analysis approaches for probing Rab GTPase localization and function in mammalian cells ⬇️

scientific article published on December 1, 2012

The ectomycorrhizal basidiomycete Hebeloma cylindrosporum undergoes early waves of transcriptional reprogramming prior to symbiotic structures differentiation

scientific article published on 11 January 2017

Transgenic expression of the dicotyledonous pattern recognition receptor EFR in rice leads to ligand-dependent activation of defense responses

scientific article

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