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List of works by Rui Vitorino

A fractionation approach applying chelating magnetic nanoparticles to characterize pericardial fluid's proteome

scientific article published on 23 September 2017

A glimpse into the modulation of post-translational modifications of human-colonizing bacteria

scientific article published on 22 November 2016

A meta-analysis to evaluate the cellular processes regulated by the interactome of endogenous and over-expressed estrogen receptor alpha.

scientific article published on 7 March 2015

A role for prolyl isomerase PIN1 in the phosphorylation-dependent modulation of PRRXL1 function

scientific article published on 3 January 2017

A synopsis on aging-Theories, mechanisms and future prospects

scientific article published on 25 June 2016

Adrenaline and reactive oxygen species elicit proteome and energetic metabolism modifications in freshly isolated rat cardiomyocytes

scientific article

An evolutionary perspective of mammal salivary peptide families: cystatins, histatins, statherin and PRPs

scientific article published on 24 January 2013

An immunoproteomic approach for characterization of dormancy within Staphylococcus epidermidis biofilms

scientific article published on 6 March 2015

An integrated perspective and functional impact of the mitochondrial acetylome

scientific article published on 24 March 2014

Analysis of low abundance membrane-associated proteins from rat pancreatic zymogen granules

scientific article published on October 2010

Analysis of salivary peptides using HPLC-electrospray mass spectrometry.

scientific article

Analysis of the human saliva proteome.

scientific article

Anti-tumoral activity of human salivary peptides.

scientific article published on 23 July 2015

Antimicrobial peptides: an alternative for innovative medicines?

scientific article

Binding of epigallocatechin-3-gallate to transthyretin modulates its amyloidogenicity

scientific article

Biofluid proteases profiling in diabetes mellitus

scientific article published on 07 February 2015

Biological Implications of Differential Expression of Mitochondrial-Shaping Proteins in Parkinson's Disease.

scientific article published on 21 December 2017

Biomarkers for cardiac cachexia: reality or utopia

scientific article published on 28 June 2014

Bionanoconjugation for proteomics applications - An overview

scientific article published on 22 May 2014

Bladder cancer-induced skeletal muscle wasting: disclosing the role of mitochondria plasticity

scientific article

Blot-MS of Carbonylated Proteins: A Tool to Identify Oxidized Proteins.

scientific article published on January 2016

Can exercise training counteract doxorubicin-induced oxidative damage of testis proteome?

scientific article published on 14 August 2017

Cellular patterns of the atrophic response in murine soleus and gastrocnemius muscles submitted to simulated weightlessness.

scientific article

Challenging the limits of detection of sialylated Thomsen-Friedenreich antigens by in-gel deglycosylation and nano-LC-MALDI-TOF-MS.

scientific article

Changes in the salivary protein profile of morbidly obese women either previously subjected to bariatric surgery or not

scientific article published on 23 September 2015

Characteristics of the gluteus medius muscle in an asymptomatic patient with radiographic signs of coxarthrosis

scientific article published on 29 July 2004

Characterization of in vitro protein oxidation using mass spectrometry: A time course study of oxidized alpha-amylase ⬇️

scientific article published on December 13, 2012

Characterization of mitochondrial proteome in a severe case of ETF-QO deficiency

scientific article published on 07 May 2011

Characterization of thymosin β4 in mammals’ saliva

scientific article published on 20 December 2012

Chemical characterization and cytotoxic potential of an ellagitannin-enriched fraction from Fragaria vesca leaves

Comparative proteomic analyses of urine from rat urothelial carcinoma chemically induced by exposure to N-butyl-N-(4-hydroxybutyl)-nitrosamine.

scientific article

Comparative proteomic and transcriptomic profile of Staphylococcus epidermidis biofilms grown in glucose-enriched medium

scientific article

Comparative proteomic map among vanA-containing Enterococcus isolated from yellow-legged gulls

article by Gilberto Igrejas et al published 31 May 2012 in Journal of integrated OMICS

Comparative proteomics of an extended spectrum β-lactamase producing Escherichia coli strain from the Iberian wolf

scientific article published on 12 March 2014

Contact dermatitis: in pursuit of sensitizer's molecular targets through proteomics

scientific article published on 29 April 2016

Cross-species comparison of mammalian saliva using an LC-MALDI based proteomic approach

scientific article published on 9 March 2015

Cytotoxicity and cell signalling induced by continuous mild hyperthermia in freshly isolated mouse hepatocytes

scientific article published on 27 April 2006

Cytotoxicity of portoamides in human cancer cells and analysis of the molecular mechanisms of action

scientific article published on 7 December 2017

Deciphering the disease-related molecular networks using urine proteomics

scholarly article by Paulo André Dias Bastos et al published September 2017 in Trends in Analytical Chemistry

Digging Deep into Peptidomics Applied to Body Fluids.

scientific article published on 18 December 2017

Dormancy within Staphylococcus epidermidis biofilms: a transcriptomic analysis by RNA-seq

scientific article published on 7 February 2014

Drosophila melanogaster larval hemolymph protein mapping

scientific article

EDTA-functionalized magnetic nanoparticles: A suitable platform for the analysis of low abundance urinary proteins.

scientific article published in April 2017

Editorial: Tutorials in Bioinformatics for Biological Science.

scientific article published in January 2018

Effect of lifestyle on age-related mitochondrial protein oxidation in mice cardiac muscle.

scientific article published on 11 August 2011

Effect of the pH of growth on the survival of Lactobacillus delbrueckii subsp. bulgaricus to stress conditions during spray-drying.

scientific article

Effects of chitooligosaccharides on human red blood cell morphology and membrane protein structure.

scientific article

Effects of olive oil polyphenols on erythrocyte oxidative damage

scientific article

EndoProteoFASP as a Tool to Unveil the Peptidome-Protease Profile: Application to Salivary Diagnostics

scientific article published in January 2018

Endurance training prevents TWEAK but not myostatin-mediated cardiac remodelling in cancer cachexia

scientific article published on 6 January 2015

Evaluation of different extraction procedures for salivary peptide analysis.

scientific article

Evolution of C, D and S-type cystatins in mammals: an extensive gene duplication in primates

scientific article

Exercise Training Impacts Cardiac Mitochondrial Proteome Remodeling in Murine Urothelial Carcinoma ⬇️

scientific article published on 31 December 2018

Exercise training protects against cancer-induced cardiac remodeling in an animal model of urothelial carcinoma

scientific article published on 13 March 2018

Exploring the monocrotaline animal model for the study of pulmonary arterial hypertension: A network approach

scientific article published on 21 September 2015

Expression and functionality of histone H2A variants in cancer

scientific article

From Proteomic Analysis to Potential Therapeutic Targets: Functional Profile of Two Lung Cancer Cell Lines, A549 and SW900, Widely Studied in Pre-Clinical Research

scientific article

Functionalized Gold Nanoparticles for the Detection of C-Reactive Protein.

scientific article

Genomic and proteomic evaluation of antibiotic resistance in Salmonella strains.

scientific article published on 24 March 2010

Gla-rich protein acts as a calcification inhibitor in the human cardiovascular system.

scientific article published on 23 December 2014

Glycan affinity magnetic nanoplatforms for urinary glycobiomarkers discovery in bladder cancer.

scientific article published on 12 March 2018

Glycation and oxidation of histones H2B and H1: in vitro study and characterization by mass spectrometry ⬇️

scientific article published on January 28, 2011

Glycoprotein enrichment method using a selective magnetic nano-probe platform (MNP) functionalized with lectins.

scientific article

Gold nanoparticles and bioconjugation: a pathway for proteomic applications

scientific article published on 10 February 2016

HMGB1 down-regulation mediates terameprocol vascular anti-proliferative effect in experimental pulmonary hypertension.

scientific article

Hierridin B Isolated from a Marine Cyanobacterium Alters VDAC1, Mitochondrial Activity, and Cell Cycle Genes on HT-29 Colon Adenocarcinoma Cells.

scientific article

High-yield expression in Escherichia coli and purification of mouse ubiquitin-activating enzyme E1.

scientific article

How to use and integrate bioinformatics tools to compare proteomic data from distinct conditions? A tutorial using the pathological similarities between Aortic Valve Stenosis and Coronary Artery Disease as a case-study

scientific article

Identification of human whole saliva protein components using proteomics.

scientific article

Identification of salivary proteins at oil-water interfaces stabilized by lysozyme and beta-lactoglobulin

scientific article published on 01 March 2010

Immunoproteomic analysis of Plasmodium falciparum antigens using sera from patients with clinical history of imported malaria.

scientific article published on 18 March 2013

Immunoreactive pattern ofStaphylococcus epidermidisbiofilm against human whole saliva

scientific article published on 05 May 2015

Impact of in Vitro Gastrointestinal Digestion and Transepithelial Transport on Antioxidant and ACE-Inhibitory Activities of Brewer's Spent Yeast Autolysate

scientific article

Impaired protein quality control system underlies mitochondrial dysfunction in skeletal muscle of streptozotocin-induced diabetic rats

scientific article published on 21 April 2012

Improving the accuracy of recombinant protein production through integration of bioinformatics, statistical and mass spectrometry methodologies.

scientific article published on 22 January 2015

In vitro hydroxyapatite adsorbed salivary proteins.

scientific article

Inability of Mutant Transthyretin V30M to Cross the Blood-Eye Barrier

scientific article published on 01 October 2012

Insight into the molecular basis of Schistosoma haematobium-induced bladder cancer through urine proteomics

scientific article

Insights into the human brain proteome: Disclosing the biological meaning of protein networks in cerebrospinal fluid.

scientific article published on 10 April 2017

Intense Pulsed Light: Friend or Foe? Molecular Evidence to Clarify Doubts

scientific article published in February 2018

Lifelong Exercise Training Modulates Cardiac Mitochondrial Phosphoproteome in Rats

scientific article published on 04 March 2014

Lifelong physical activity modulation of the skeletal muscle mitochondrial proteome in mice.

scientific article published on 30 May 2010

Lipidomic characterization of streptozotocin-induced heart mitochondrial dysfunction

scientific article

Long-term exercise training prevents mammary tumorigenesis-induced muscle wasting in rats through the regulation of TWEAK signalling

scientific article

Mass spectrometry characterization of the glycation sites of bovine insulin by tandem mass spectrometry

scientific article

Methodological approaches and insights on protein aggregation in biological systems

scientific article published on 28 November 2016

Mitochondria proteome profiling: a comparative analysis between gel- and gel-free approaches.

scientific article published on 22 April 2013

Mitochondrial plasticity in cancer-related muscle wasting: potential approaches for its management

scientific article published on May 2015

Molecular Plasticity under Ocean Warming: Proteomics and Fitness Data Provides Clues for a Better Understanding of the Thermal Tolerance in Fish

scientific article

Molecular insights into mitochondrial dysfunction in cancer-related muscle wasting

scholarly article by Diana Antunes published in June 2014

Multiplicity of aspartic proteinases from Cynara cardunculus L.

scientific article

New insights on the mitochondrial proteome plasticity in Parkinson's disease.

scientific article published on 08 January 2016

OXPHOS susceptibility to oxidative modifications: The role of heart mitochondrial subcellular location ⬇️

scientific article published on May 1, 2011

Ocean warming alters cellular metabolism and induces mortality in fish early life stages: A proteomic approach.

scientific article

On-plate digestion using a commercial microfraction collector for nano-HPLC matrix-assisted laser desorption/ionization tandem time-of-flight protein analysis.

scientific article

One decade of salivary proteomics: current approaches and outstanding challenges.

scientific article published on 25 October 2012

Overexpression of tumour-associated carbohydrate antigen sialyl-Tn in advanced bladder tumours

scientific article published on 21 March 2013

Oxidation of bovine serum albumin: identification of oxidation products and structural modifications

scientific article published in August 2009

Oxidative modifications in glycated insulin.

scientific article published on 22 May 2010

Peptide profile of human acquired enamel pellicle using MALDI tandem MS.

scientific article

Peptidomic analysis of human acquired enamel pellicle.

scientific article

Pericardial fluid: an underrated molecular library of heart conditions and a potential vehicle for cardiac therapy

scientific article published on 18 January 2019

Post-translational modifications and mass spectrometry detection

scientific article published on 31 August 2013

Presence of cytosolic peroxiredoxin 2 in the erythrocyte membrane of patients with hereditary spherocytosis

scientific article published on 01 April 2008

Protease profiling of different biofluids in type 1 diabetes mellitus.

scientific article published on 10 September 2012

Protein extraction and comparison of stain protocols for analysis of two-dimensional electrophoresis gels

scientific article published in April 2004

Protein identification using nano-HPLC-MS: ESI-MS and MALDI-MS interfaces.

scientific article

Proteolysis activation and proteome alterations in murine skeletal muscle submitted to 1 week of hindlimb suspension

scientific article published on 19 August 2009

Proteome Profiling of Sertoli Cells Using a GeLC-MS/MS Strategy

scientific article published in January 2018

Proteome of a methicillin-resistant Staphylococcus aureus clinical strain of sequence type ST398.

scientific article

Proteome signatures--how are they obtained and what do they teach us?

scientific article published on 24 July 2015

Proteome-base biomarkers in diabetes mellitus: progress on biofluids' protein profiling using mass spectrometry

scientific article published on October 2012

Proteomic characterization of vanA-containing Enterococcus recovered from Seagulls at the Berlengas Natural Reserve, W Portugal.

scientific article

Proteomic evaluation of Escherichia coli isolates from human clinical strains

scholarly article by Gilberto Igrejas et al published 1 February 2011 in Journal of integrated OMICS

Proteomic profile of dormancy within Staphylococcus epidermidis biofilms using iTRAQ and label-free strategies

scientific article published on 12 February 2015

Proteomic profile of susceptible and multidrug-resistant clinical isolates of Escherichia coli and Klebsiella pneumoniae using label-free and immunoproteomic strategies

scientific article published on 28 December 2016

Proteomic studies with a novel nano-magnetic chelating system to capture metalloproteins and its application in the preliminary study of monocyte and macrophage sub-secretome.

scientific article published on 17 May 2016

Proteomic study in an Escherichia coli strain from seagulls of the Berlengas Natural Reserve of Portugal

article

Proteomics of immune-challenged Drosophila melanogaster larvae hemolymph

scientific article published in March 2005

Pursuing type 1 diabetes mellitus and related complications through urinary proteomics

article by Armando Caseiro et al published March 2014 in Translational Research

Reactivity of Human Salivary Proteins Families Toward Food Polyphenols

scientific article published on 20 April 2011

Recent insights on the molecular mechanisms and therapeutic approaches for cardiac cachexia.

scientific article

Remodeling of liver phospholipidomic profile in streptozotocin-induced diabetic rats

scientific article published on 13 August 2013

Ripening-related changes in the cell walls of olive (Olea europaea L.) pulp of two consecutive harvests

Salivary peptidome in type 1 diabetes mellitus.

scientific article

Salivary peptidomic as a tool to disclose new potential antimicrobial peptides

scientific article published on 20 December 2014

Salivary peptidomics.

scientific article published on October 2010

Salivary proteome and peptidome profiling in type 1 diabetes mellitus using a quantitative approach

scientific article published on 25 February 2013

Sample Treatment for Saliva Proteomics

scientific article published on 01 January 2019

Secretome analysis of Trichoderma atroviride T17 biocontrol of Guignardia citricarpa

Signaling pathways underlying skeletal muscle wasting in experimental pulmonary arterial hypertension

scientific article published on 09 October 2015

Skeletal muscle atrophy increases cell proliferation in mice gastrocnemius during the first week of hindlimb suspension

scientific article published on 25 April 2006

Spatially distinct mitochondrial populations exhibit different mitofilin levels

scientific article published on 22 March 2012

Subcellular proteomics of mice gastrocnemius and soleus muscles.

scientific article published on 12 April 2007

Subsarcolemmal and intermyofibrillar mitochondria proteome differences disclose functional specializations in skeletal muscle.

scientific article published in September 2010

Synthesis and Optimization of Lectin Functionalized Nanoprobes for the Selective Recovery of Glycoproteins from Human Body Fluids ⬇️

scientific article published on August 26, 2011

Temperature Modulates the Secretome of the Phytopathogenic Fungus Lasiodiplodia theobromae

scientific article

Tetracycline and rifampicin induced a viable but nonculturable state in Staphylococcus epidermidis biofilms

scientific article published on 11 December 2017

The Secretome of Human Neonatal Mesenchymal Stem Cells Modulates Doxorubicin-Induced Cytotoxicity: Impact in Non-Tumor Cells

scientific article published on 3 December 2021

The efficiency of trypsin digestion for mass-spectrometry-based identification and quantification of oxidized proteins: evaluation of the digestion of oxidized bovine serum albumin.

scientific article published in January 2014

The glycation site specificity of human serum transferrin is a determinant for transferrin's functional impairment under elevated glycaemic conditions

scientific article

The histone H2A isoform Hist2h2ac is a novel regulator of proliferation and epithelial-mesenchymal transition in mammary epithelial and in breast cancer cells.

scientific article published on 10 March 2017

Toward a standardized saliva proteome analysis methodology.

scientific article published on 15 July 2012

Toward the definition of a peptidome signature and protease profile in chronic periodontitis

scientific article published on 8 February 2015

Towards the standardization of stem cell therapy studies for ischemic heart diseases: Bridging the gap between animal models and the clinical setting

scientific article published on 14 November 2016

Trichoderma harzianum T1A constitutively secretes proteins involved in the biological control of Guignardia citricarpa

Two-dimensional electrophoresis study of in vitro pellicle formation and dental caries susceptibility

scientific article published on 01 April 2006

Uncovering the exercise-related proteome signature in skeletal muscle

scientific article published on 3 December 2015

Uncovering the molecular networks in periodontitis ⬇️

scientific article published on 14 July 2014

Unraveling the Role of Epicardial Adipose Tissue in Coronary Artery Disease: Partners in Crime?

scientific article published on 23 November 2020

Unraveling the exercise-related proteome signature in heart

scientific article

Unraveling the phosphoproteome dynamics in mammal mitochondria from a network perspective

scientific article published on 06 September 2013

Unravelling the Power of Omics for the Infertile Aging Male

scientific article published on 18 October 2016

Unveiling antimicrobial peptide-generating human proteases using PROTEASIX.

scientific article

Use of MALDI-TOF Mass Spectrometry to Assay the Transthyretin V30M Mutation in Serum From a Liver Transplant Donor: A Case Report

scientific article published on 01 May 2015

endoProteoFASP: a novel FASP approach to profile salivary peptidome and disclose salivary proteases.

scientific article

iTRAQ-based quantitative proteomic analysis of submandibular glands from rats with STZ-induced hyperglycemia.

scientific article published on 5 December 2012

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