List of works - David J. Scott

A hydrodynamic comparison of solution and gas phase proteins and their complexes.

scientific article

A potential for overestimating the absolute magnitudes of second virial coefficients by small-angle X-ray scattering

scientific article

A simpler analysis for the measurement of second virial coefficients by self-interaction chromatography

scientific article published on 01 August 2007

Accounting for thermodynamic non-ideality in the Guinier region of small-angle scattering data of proteins

scientific article

Allowance for boundary sharpening in the determination of diffusion coefficients by sedimentation velocity: a historical perspective

scientific article published on 27 January 2018

Allowance for effects of thermodynamic nonideality in sedimentation equilibrium distributions reflecting protein dimerization

scientific article published on 13 December 2011

Allowance for radial dilution in evaluating the concentration dependence of sedimentation coefficients for globular proteins

scientific article published on 4 October 2017

Allowance for the effect of protein charge in the characterization of nonideal solute self-association by sedimentation equilibrium.

scientific article published on 4 May 2010

An undecided coiled coil: the leucine zipper of Nek2 kinase exhibits atypical conformational exchange dynamics

scientific article

Analytical ultracentrifugation: A versatile tool for the characterisation of macromolecular complexes in solution

scientific article

Anomalous small angle x-ray scattering simulations: proof of concept for distance measurements for nanoparticle-labelled biomacromolecules in solution

scientific article

Characterisation of a GroEL single-ring mutant that supports growth of Escherichia coli and has GroES-dependent ATPase activity

scientific article published on 16 December 2009

Characterization of Intrinsically Disordered Proteins by Analytical Ultracentrifugation

scientific article published on 10 July 2015

Cleavage of Individual DNA Strands by the Different Subunits of the Heterodimeric Restriction Endonuclease BbvCI

scientific article published on 01 May 2005

Comparison of methods for characterizing nonideal solute self-association by sedimentation equilibrium

scientific article published on August 2009

Concentration dependence of translational diffusion coefficients for globular proteins

scientific article published in December 2014

Conformational properties of beta-PrP.

scientific article published on 15 April 2009

Creating hetero-11-mers composed of wild-type and mutant subunits to study RNA binding to TRAP.

scientific article published on 22 January 2002

Crystal structure of signal regulatory protein gamma (SIRPγ) in complex with an antibody Fab fragment

scientific article

Crystal structures of the liganded and unliganded nickel-binding protein NikA from Escherichia coli

scientific article

Defining the Intrinsically Disordered C-Terminal Domain of SSB Reveals DNA-Mediated Compaction

scientific article published on 18 December 2015

Dimer formation and transcription activation in the sporulation response regulator Spo0A.

scientific article published in February 2002

Dimerization of inositol monophosphatase Mycobacterium tuberculosis SuhB is not constitutive, but induced by binding of the activator Mg2+

scientific article

DnaB proteolysis in vivo regulates oligomerization and its localization at oriC in Bacillus subtilis

scientific article

Domain swapping reveals that the C- and N-terminal domains of DnaG and DnaB, respectively, are functional homologues

scientific article

Dynamic Allostery in the Ring Protein TRAP

scientific article published on 22 May 2007

Dynamics of odorant binding to thin aqueous films of rat-OBP3.

scientific article

Effect of protein kinase A-mediated phosphorylation on the structure and association properties of the enteropathogenic Escherichia coli Tir virulence protein

scientific article

Effects of the oncogenic V(664)E mutation on membrane insertion, structure, and sequence-dependent interactions of the Neu transmembrane domain in micelles and model membranes: an integrated biophysical and simulation study

scientific article published on 14 March 2012

Engineering a reagentless biosensor for single-stranded DNA to measure real-time helicase activity in Bacillus

scientific article published on 11 June 2014

Engineering the human Fc-region enables direct cell killing by cancer glycan-targeting antibodies without the need for immune effector cells or complement

scientific article published on 12 June 2020

Enthalpy/entropy compensation effects from cavity desolvation underpin broad ligand binding selectivity for rat odorant binding protein 3

scientific article

Erratum to: Accounting for thermodynamic non-ideality in the Guinier region of small-angle scattering data of proteins

scientific article published on 23 October 2017

Evaluation of diffusion coefficients by means of an approximate steady-state condition in sedimentation velocity distributions

scientific article

Examination of the discrepancy between size estimates for ovalbumin from small-angle X-ray scattering and other physicochemical measurements.

scientific article published on 22 August 2011

Experimental determination of second virial coefficients by small-angle X-ray scattering: a problem revisited

scientific article published on 31 October 2019

Expression, purification and crystallization of the cell-division protein YgfE from Escherichia coli.

scientific article

Flexibility of KorA, a plasmid-encoded, global transcription regulator, in the presence and the absence of its operator ⬇️

scientific article

FtsZ polymer-bundling by the Escherichia coli ZapA orthologue, YgfE, involves a conformational change in bound GTP.

scientific article published on 19 March 2007

Insulin at pH 2: structural analysis of the conditions promoting insulin fibre formation

scientific article

Interaction of sigma 70 with Escherichia coli RNA polymerase core enzyme studied by surface plasmon resonance.

scientific article published in September 2000

Interaction of sigma factor sigmaN with Escherichia coli RNA polymerase core enzyme

scientific article published on December 2000

Intrinsic disorder in the partitioning protein KorB persists after co-operative complex formation with operator DNA and KorA.

scientific article published on 31 July 2017

Isolation and characterisation of mutants of GroEL that are fully functional as single rings

scientific article published in September 2003

Low resolution solution structure of the Apo form of Escherichia coli haemoglobin protease Hbp.

scientific article

Metastasis-associated protein Mts1 (S100A4) inhibits CK2-mediated phosphorylation and self-assembly of the heavy chain of nonmuscle myosin

scientific article published on 01 December 2000

Multifunctional xylooligosaccharide/cephalosporin C deacetylase revealed by the hexameric structure of the Bacillus subtilis enzyme at 1.9A resolution

scientific article

N-terminal domain of prion protein directs its oligomeric association

scientific article

Order and disorder in the domain organization of the plasmid partition protein KorB.

scientific article

Quaternary re-arrangement analysed by spectral enhancement: the interaction of a sporulation repressor with its antagonist.

scientific article published in November 1999

Rapid Odorant Release in Mammalian Odour Binding Proteins Facilitates Their Temporal Coupling to Odorant Signals

scientific article published on 07 October 2010

Remodeling of the AB site of rat parvalbumin and oncomodulin into a canonical EF-hand

scientific article published on 01 September 1999

STAT2 Is a Pervasive Cytokine Regulator due to Its Inhibition of STAT1 in Multiple Signaling Pathways

scientific article

Screening transthyretin amyloid fibril inhibitors: characterization of novel multiprotein, multiligand complexes by mass spectrometry

scientific article

Sedimentation velocity of intrinsically disordered proteins: what information can we actually obtain?

scientific article

SilE is an intrinsically disordered periplasmic "molecular sponge" involved in bacterial silver resistance

scientific article

Structural Insights into the β-Mannosidase fromT. reeseiObtained by Synchrotron Small-Angle X-ray Solution Scattering Enhanced by X-ray Crystallography†

scientific article published on 01 July 2002

Structural basis of filopodia formation induced by the IRSp53/MIM homology domain of human IRSp53

scientific article

Structural characterisation of the insecticidal toxin XptA1, reveals a 1.15 MDa tetramer with a cage-like structure.

scientific article published on 23 December 2006

Structural modeling of an outer membrane electron conduit from a metal-reducing bacterium suggests electron transfer via periplasmic redox partners.

scientific article published on 10 April 2018

Structure and Catalytic Regulatory Function of Ubiquitin Specific Protease 11 N-Terminal and Ubiquitin-like Domains

scientific article

Structure of rat odorant-binding protein OBP1 at 1.6 A resolution

scientific article

Structure of the USP15 N-terminal domains: a β-hairpin mediates close association between the DUSP and UBL domains

scientific article

Structure-Guided Enhancement of Selectivity of Chemical Probe Inhibitors Targeting Bacterial Seryl-tRNA Synthetase

scientific article published on 05 November 2019

Subunit assembly for DNA cleavage by restriction endonuclease SgrAI.

scientific article published in March 2003

Synthesis of α-Glucan in Mycobacteria Involves a Hetero-octameric Complex of Trehalose Synthase TreS and Maltokinase Pep2

scientific article

The 2-oxoacid dehydrogenase multi-enzyme complex of the archaeon Thermoplasma acidophilum - recombinant expression, assembly and characterization

scientific article published on 26 September 2007

The Bacillus subtilis DnaD protein: a putative link between DNA remodeling and initiation of DNA replication

scientific article

The DNA-remodelling activity of DnaD is the sum of oligomerization and DNA-binding activities on separate domains

scientific article

The Vip3Ag4 Insecticidal Protoxin from Bacillus thuringiensis Adopts A Tetrameric Configuration That Is Maintained on Proteolysis

scientific article published on 14 May 2017

The dimerization interface of the metastasis-associated protein S100A4 (Mts1): in vivo and in vitro studies

scientific article (publication date: 29 June 2001)

The lipidome and proteome of oil bodies from Helianthus annuus (common sunflower)

scientific article

The osmotic second virial coefficient for protein self-interaction: Use and misuse to describe thermodynamic nonideality

scientific article published on 03 September 2015

The role of the jaw subdomain of peptidoglycan glycosyltransferases for lipid II polymerization

scientific article published on 01 June 2018

The shock of the old: hydrodynamics for the masses

scientific article

Three-Dimensional Distribution of Phospholipids in Gram Negative Bacteria

scientific article

When a module is not a domain: the case of the REJ module and the redefinition of the architecture of polycystin-1.

scientific article published on May 2011

List of works by David J. Scott

A hydrodynamic comparison of solution and gas phase proteins and their complexes.

A potential for overestimating the absolute magnitudes of second virial coefficients by small-angle X-ray scattering

A simpler analysis for the measurement of second virial coefficients by self-interaction chromatography

Accounting for thermodynamic non-ideality in the Guinier region of small-angle scattering data of proteins

Allowance for boundary sharpening in the determination of diffusion coefficients by sedimentation velocity: a historical perspective

Allowance for effects of thermodynamic nonideality in sedimentation equilibrium distributions reflecting protein dimerization

Allowance for radial dilution in evaluating the concentration dependence of sedimentation coefficients for globular proteins

Allowance for the effect of protein charge in the characterization of nonideal solute self-association by sedimentation equilibrium.

An undecided coiled coil: the leucine zipper of Nek2 kinase exhibits atypical conformational exchange dynamics

Analytical ultracentrifugation: A versatile tool for the characterisation of macromolecular complexes in solution

Anomalous small angle x-ray scattering simulations: proof of concept for distance measurements for nanoparticle-labelled biomacromolecules in solution

Characterisation of a GroEL single-ring mutant that supports growth of Escherichia coli and has GroES-dependent ATPase activity

Characterization of Intrinsically Disordered Proteins by Analytical Ultracentrifugation

Cleavage of Individual DNA Strands by the Different Subunits of the Heterodimeric Restriction Endonuclease BbvCI

Comparison of methods for characterizing nonideal solute self-association by sedimentation equilibrium

Concentration dependence of translational diffusion coefficients for globular proteins

Conformational properties of beta-PrP.

Creating hetero-11-mers composed of wild-type and mutant subunits to study RNA binding to TRAP.

Crystal structure of signal regulatory protein gamma (SIRPγ) in complex with an antibody Fab fragment

Crystal structures of the liganded and unliganded nickel-binding protein NikA from Escherichia coli

Defining the Intrinsically Disordered C-Terminal Domain of SSB Reveals DNA-Mediated Compaction

Dimer formation and transcription activation in the sporulation response regulator Spo0A.

Dimerization of inositol monophosphatase Mycobacterium tuberculosis SuhB is not constitutive, but induced by binding of the activator Mg2+

DnaB proteolysis in vivo regulates oligomerization and its localization at oriC in Bacillus subtilis

Domain swapping reveals that the C- and N-terminal domains of DnaG and DnaB, respectively, are functional homologues

Dynamic Allostery in the Ring Protein TRAP

Dynamics of odorant binding to thin aqueous films of rat-OBP3.

Effect of protein kinase A-mediated phosphorylation on the structure and association properties of the enteropathogenic Escherichia coli Tir virulence protein

Effects of the oncogenic V(664)E mutation on membrane insertion, structure, and sequence-dependent interactions of the Neu transmembrane domain in micelles and model membranes: an integrated biophysical and simulation study

Engineering a reagentless biosensor for single-stranded DNA to measure real-time helicase activity in Bacillus

Engineering the human Fc-region enables direct cell killing by cancer glycan-targeting antibodies without the need for immune effector cells or complement

Enthalpy/entropy compensation effects from cavity desolvation underpin broad ligand binding selectivity for rat odorant binding protein 3

Erratum to: Accounting for thermodynamic non-ideality in the Guinier region of small-angle scattering data of proteins

Evaluation of diffusion coefficients by means of an approximate steady-state condition in sedimentation velocity distributions

Examination of the discrepancy between size estimates for ovalbumin from small-angle X-ray scattering and other physicochemical measurements.

Experimental determination of second virial coefficients by small-angle X-ray scattering: a problem revisited

Expression, purification and crystallization of the cell-division protein YgfE from Escherichia coli.

Flexibility of KorA, a plasmid-encoded, global transcription regulator, in the presence and the absence of its operator ⬇️

FtsZ polymer-bundling by the Escherichia coli ZapA orthologue, YgfE, involves a conformational change in bound GTP.

Insulin at pH 2: structural analysis of the conditions promoting insulin fibre formation

Interaction of sigma 70 with Escherichia coli RNA polymerase core enzyme studied by surface plasmon resonance.

Interaction of sigma factor sigmaN with Escherichia coli RNA polymerase core enzyme

Intrinsic disorder in the partitioning protein KorB persists after co-operative complex formation with operator DNA and KorA.

Isolation and characterisation of mutants of GroEL that are fully functional as single rings

Low resolution solution structure of the Apo form of Escherichia coli haemoglobin protease Hbp.

Metastasis-associated protein Mts1 (S100A4) inhibits CK2-mediated phosphorylation and self-assembly of the heavy chain of nonmuscle myosin

Multifunctional xylooligosaccharide/cephalosporin C deacetylase revealed by the hexameric structure of the Bacillus subtilis enzyme at 1.9A resolution

N-terminal domain of prion protein directs its oligomeric association

Order and disorder in the domain organization of the plasmid partition protein KorB.

Quaternary re-arrangement analysed by spectral enhancement: the interaction of a sporulation repressor with its antagonist.

Rapid Odorant Release in Mammalian Odour Binding Proteins Facilitates Their Temporal Coupling to Odorant Signals

Remodeling of the AB site of rat parvalbumin and oncomodulin into a canonical EF-hand

STAT2 Is a Pervasive Cytokine Regulator due to Its Inhibition of STAT1 in Multiple Signaling Pathways

Screening transthyretin amyloid fibril inhibitors: characterization of novel multiprotein, multiligand complexes by mass spectrometry

Sedimentation velocity of intrinsically disordered proteins: what information can we actually obtain?

SilE is an intrinsically disordered periplasmic "molecular sponge" involved in bacterial silver resistance

Structural Insights into the β-Mannosidase fromT. reeseiObtained by Synchrotron Small-Angle X-ray Solution Scattering Enhanced by X-ray Crystallography†

Structural basis of filopodia formation induced by the IRSp53/MIM homology domain of human IRSp53

Structural characterisation of the insecticidal toxin XptA1, reveals a 1.15 MDa tetramer with a cage-like structure.

Structural modeling of an outer membrane electron conduit from a metal-reducing bacterium suggests electron transfer via periplasmic redox partners.

Structure and Catalytic Regulatory Function of Ubiquitin Specific Protease 11 N-Terminal and Ubiquitin-like Domains

Structure of rat odorant-binding protein OBP1 at 1.6 A resolution

Structure of the USP15 N-terminal domains: a β-hairpin mediates close association between the DUSP and UBL domains

Structure-Guided Enhancement of Selectivity of Chemical Probe Inhibitors Targeting Bacterial Seryl-tRNA Synthetase

Subunit assembly for DNA cleavage by restriction endonuclease SgrAI.

Synthesis of α-Glucan in Mycobacteria Involves a Hetero-octameric Complex of Trehalose Synthase TreS and Maltokinase Pep2

The 2-oxoacid dehydrogenase multi-enzyme complex of the archaeon Thermoplasma acidophilum - recombinant expression, assembly and characterization

The Bacillus subtilis DnaD protein: a putative link between DNA remodeling and initiation of DNA replication

The DNA-remodelling activity of DnaD is the sum of oligomerization and DNA-binding activities on separate domains

The Vip3Ag4 Insecticidal Protoxin from Bacillus thuringiensis Adopts A Tetrameric Configuration That Is Maintained on Proteolysis

The dimerization interface of the metastasis-associated protein S100A4 (Mts1): in vivo and in vitro studies

The lipidome and proteome of oil bodies from Helianthus annuus (common sunflower)

The osmotic second virial coefficient for protein self-interaction: Use and misuse to describe thermodynamic nonideality

The role of the jaw subdomain of peptidoglycan glycosyltransferases for lipid II polymerization

The shock of the old: hydrodynamics for the masses

Three-Dimensional Distribution of Phospholipids in Gram Negative Bacteria

When a module is not a domain: the case of the REJ module and the redefinition of the architecture of polycystin-1.