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List of works by Ali Najafi

A systems biology approach for miRNA-mRNA expression patterns analysis in non-small cell lung cancer.

scientific article published on 12 October 2015

Airway remodeling: Systems biology approach, from bench to bedside

scientific article published on 10 June 2016

Altered expression of apoptotic genes in response to OCT4B1 suppression in human tumor cell lines

scientific article

Cancer systems biology and modeling: microscopic scale and multiscale approaches.

scientific article published on 18 March 2014

Comparative gene-expression profiling of CD133(+) and CD133(-) D10 melanoma cells

scientific article published on 19 August 2015

Computational approach to analyze isolated ssDNA aptamers against angiotensin II.

scientific article

Detection of Critical Genes Associated with Overall Survival (OS) and Progression-Free Survival (PFS) in Reconstructed Canine B-Cell Lymphoma Gene Regulatory Network (GRN).

scientific article published on 28 January 2016

Development of an epitope-based vaccine inhibiting immune cells rolling and migration against atherosclerosis using in silico approaches.

scientific article published in September 2017

Evidence for embryonic stem-like signature and epithelial-mesenchymal transition features in the spheroid cells derived from lung adenocarcinoma.

scientific article published on 5 April 2016

GelClust: a software tool for gel electrophoresis images analysis and dendrogram generation

scientific article published on 30 May 2013

Genome scale modeling in systems biology: algorithms and resources

scientific article

Identification and characterization of a cathepsin L-like cysteine protease from Rhipicephalus (Boophilus) annulatus.

scientific article published on 23 November 2015

Identification of direct target genes of miR-7, miR-9, miR-96, and miR-182 in the human breast cancer cell lines MCF-7 and MDA-MB-231.

scientific article published on 22 May 2017

Immunoproteomics approach for EPC1 antigenic epitope prediction of G1 and G6 strains of Echinococcus granulosus

scientific article published on 20 June 2013

Inducing Apoptosis and Decreasing Cell Proliferation in Human Acute Promyelocytic Leukemia Through Regulation Expression of CASP3 by Let-7a-5p Blockage.

scientific article

Inducing cell proliferative prevention in human acute promyelocytic leukemia by miR-182 inhibition through modulation of CASP9 expression.

scientific article published on 11 March 2017

Microarray gene expression analysis of the human airway in patients exposed to sulfur mustard.

scientific article

Microarray long oligo probe designing for Escherichia coli: an in-silico DNA marker extraction

scientific article (publication date: 2016)

Molecular characterisation of quinolone-resistant Shigella strains isolated in Tehran, Iran.

scientific article

Molecular epidemiology of hepatitis C virus among injection drug users in Iran: a slight change in prevalence of HCV genotypes over time

scientific article published on 13 June 2012

Natural antisense RNAs as mRNA regulatory elements in bacteria: a review on function and applications

scientific article

Pathway reconstruction of airway remodeling in chronic lung diseases: a systems biology approach.

scientific article

Reconstruction of canine diffuse large B-cell lymphoma gene regulatory network: detection of functional modules and hub genes.

scientific article published on 09 February 2015

Systems biology study of transcriptional and post-transcriptional co-regulatory network sheds light on key regulators involved in important biological processes in Citrus sinensis

scientific article published on 10 February 2017

The effect of sodium valproate on acetic acid-induced colitis in rats

article

The effect of theophylline on acetic acid induced ulcerative colitis in rats.

scientific article

Use of TaqMan® real-time PCR for rapid detection of Salmonella enterica serovar Typhi.

scientific article published on June 2014

mRNA-miRNA bipartite network reconstruction to predict prognostic module biomarkers in colorectal cancer stage differentiation

scientific article published on September 2017

miRNA-mRNA network involved in folliculogenesis interactome: systems biology approach

scientific article published on 27 April 2017

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