Search filters

List of works by Matej Orešič

15-Hydroxyprostaglandin dehydrogenase associates with poor prognosis in breast cancer, induces epithelial-mesenchymal transition, and promotes cell migration in cultured breast cancer cells.

scientific article

42. METABOLISM AND CO-MORBIDITIES IN PSYCHOTIC DISORDERS.

scientific article

42.3 METABOLOMICS APPROACHES TO STUDY METABOLIC CO-MORBIDITIES IN PSYCHOTIC DISORDERS.

scientific article published in April 2018

4β-Hydroxycholesterol Signals From the Liver to Regulate Peripheral Cholesterol Transporters

scientific article published on 27 March 2020

A Healthy Nordic Diet Alters the Plasma Lipidomic Profile in Adults with Features of Metabolic Syndrome in a Multicenter Randomized Dietary Intervention

scientific article published on 9 March 2016

A comparative evaluation of software for the analysis of liquid chromatography-tandem mass spectrometry data from isotope coded affinity tag experiments

scientific article

A computational framework to integrate high-throughput ‘-omics’ datasets for the identification of potential mechanistic links

A longitudinal plasma lipidomics dataset from children who developed islet autoimmunity and type 1 diabetes

scientific article published on 13 November 2018

A systems biology strategy reveals biological pathways and plasma biomarker candidates for potentially toxic statin-induced changes in muscle

scientific article

Ablation of PGC-1beta results in defective mitochondrial activity, thermogenesis, hepatic function, and cardiac performance

scientific article (publication date: November 2006)

Accelerated renal disease is associated with the development of metabolic syndrome in a glucolipotoxic mouse model.

scientific article

Acquired obesity is associated with changes in the serum lipidomic profile independent of genetic effects--a monozygotic twin study

scientific article

Adaptation and failure of pancreatic beta cells in murine models with different degrees of metabolic syndrome

scientific article published on 19 October 2009

Adaptive changes of the Insig1/SREBP1/SCD1 set point help adipose tissue to cope with increased storage demands of obesity

scientific article

Adipose tissue inflammation and increased ceramide content characterize subjects with high liver fat content independent of obesity

scientific article published on 9 July 2007

Age- and islet autoimmunity-associated differences in amino acid and lipid metabolites in children at risk for type 1 diabetes

scientific article published on November 2011

Algorithms and tools for the preprocessing of LC–MS metabolomics data

scholarly article by Sandra Castillo et al published August 2011 in Chemometrics and Intelligent Laboratory Systems

An Overview of Metabolomics Data Analysis: Current Tools and Future Perspectives

An integrative approach for biological data mining and visualisation

scientific article

Analysis of microbiota in first episode psychosis identifies preliminary associations with symptom severity and treatment response

scientific article published on 22 April 2017

Analytical Lipidomics in Metabolic and Clinical Research

scientific article published on 01 October 2015

ApoCIII-enriched LDL in type 2 diabetes displays altered lipid composition, increased susceptibility for sphingomyelinase, and increased binding to biglycan

scientific article published on 05 June 2009

Application of Lipidomics and Metabolomics to the Study of Adipose Tissue

scientific article published on 01 January 2008

Applications of a new subspace clustering algorithm (COSA) in medical systems biology

Association Between Circulating Lipids and Future Weight Gain in Individuals With an At-Risk Mental State and in First-Episode Psychosis

scientific article published on 01 July 2020

Association of lipidome remodeling in the adipocyte membrane with acquired obesity in humans

scientific article

Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data

scientific article

Bioanalytical techniques in nontargeted clinical lipidomics

scientific article published on 9 February 2016

Bioinformatics and computational approaches applicable to lipidomics

Bioinformatics and computational methods for lipidomics

scientific article published on 24 January 2009

Bioinformatics strategies for lipidomics analysis: characterization of obesity related hepatic steatosis

scientific article

Bioinformatics strategies for the analysis of lipids

scientific article published in January 2009

Blocking VLDL secretion causes hepatic steatosis but does not affect peripheral lipid stores or insulin sensitivity in mice

scientific article published on June 2008

Building an International Consortium for Tracking Coronavirus Health Status

scientific article published on 06 April 2020

Building an international consortium for tracking coronavirus health status

scientific article published on 02 June 2020

COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access

scientific article

Caloric restriction ameliorates angiotensin II-induced mitochondrial remodeling and cardiac hypertrophy

scientific article

Capillary electrophoresis with UV detection and mass spectrometry in method development for profiling metabolites of steroid hormone metabolism

scientific article published on 14 June 2008

Characterising metabolically healthy obesity in weight-discordant monozygotic twins

scientific article published on 8 October 2013

Characterization of cerebrospinal fluid by comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry.

scientific article published on 8 April 2013

Characterization of microbial metabolism of Syrah grape products in an in vitro colon model using targeted and non-targeted analytical approaches

scientific article published on 16 June 2012

Circulating metabolites in progression to islet autoimmunity and type 1 diabetes

scientific article published on 23 August 2019

Circulating triacylglycerol signatures and insulin sensitivity in NAFLD associated with the E167K variant in TM6SF2

Circulating triacylglycerol signatures in nonalcoholic fatty liver disease associated with the I148M variant in PNPLA3 and with obesity

scientific article published on 5 September 2013

Comparative metabolomics of estrogen receptor positive and estrogen receptor negative breast cancer: alterations in glutamine and beta-alanine metabolism

scientific article

Comparison of lipid and fatty acid composition of the liver, subcutaneous and intra-abdominal adipose tissue, and serum

scientific article published in October 2009

Compartmentation of glycogen metabolism revealed from 13C isotopologue distributions

scientific article

Composition and lipid spatial distribution of HDL particles in subjects with low and high HDL-cholesterol

scientific article

Connecting genes to metabolites by a systems biology approach

scholarly article

Cord serum lipidome in prediction of islet autoimmunity and type 1 diabetes

scientific article published on 29 April 2013

Cord-Blood Lipidome in Progression to Islet Autoimmunity and Type 1 Diabetes

scientific article published on 21 January 2019

Correction: Peroxisomal and microsomal lipid pathways associated with resistance to hepatic steatosis and reduced pro-inflammatory state

scientific article published on 01 May 2020

Cross-Species Translation of Multi-way Biomarkers

Data analysis tool for comprehensive two-dimensional gas chromatography/time-of-flight mass spectrometry

scientific article

Data integration and visualization system for enabling conceptual biology

scientific article

Data processing for mass spectrometry-based metabolomics

scientific article

Data standards can boost metabolomics research, and if there is a will, there is a way

scientific article

Decreased cord-blood phospholipids in young age-at-onset type 1 diabetes

scientific article published on 08 August 2013

Deep learning meets metabolomics: a methodological perspective

scientific article published on 17 September 2020

Deficient Endoplasmic Reticulum-Mitochondrial Phosphatidylserine Transfer Causes Liver Disease

scientific article published on 01 May 2019

Deletion of the metabolic transcriptional coactivator PGC1β induces cardiac arrhythmia

scientific article published on June 2011

Detection of molecular paths associated with insulitis and type 1 diabetes in non-obese diabetic mouse

scientific article

Dietary carbohydrate modification alters serum metabolic profiles in individuals with the metabolic syndrome.

scientific article published on 23 June 2009

Differences in muscle and adipose tissue gene expression and cardio-metabolic risk factors in the members of physical activity discordant twin pairs.

scientific article

Differential lipid partitioning between adipocytes and tissue macrophages modulates macrophage lipotoxicity and M2/M1 polarization in obese mice ⬇️

scientific article

Double Derivatization Strategy for High-Sensitivity and High-Coverage Localization of Double Bonds in Free Fatty Acids by Mass Spectrometry

scientific article published on 06 April 2020

Drug metabolome of the simvastatin formed by human intestinal microbiota in vitro

scientific article published on 8 November 2010

Dynamic network topology changes in functional modules predict responses to oxidative stress in yeast

scientific article

Dynamics of Plasma Lipidome in Progression to Islet Autoimmunity and Type 1 Diabetes - Type 1 Diabetes Prediction and Prevention Study (DIPP)

scientific article published on 13 July 2018

Dysregulated Lipid Metabolism Precedes Onset of Psychosis

scientific article published on 25 July 2020

Dysregulation of lipid and amino acid metabolism precedes islet autoimmunity in children who later progress to type 1 diabetes

scientific article published on 15 December 2008

Early familial dilated cardiomyopathy: identification with determination of disease state parameter from cine MR image data

scientific article

Early-life exposure to perfluorinated alkyl substances modulates lipid metabolism in progression to celiac disease

scientific article published on 30 June 2020

Effect of perfluorooctanesulfonic acid (PFOS) on the liver lipid metabolism of the developing chicken embryo

scientific article published on 20 December 2018

Effect of probiotic Lactobacillus rhamnosus GG intervention on global serum lipidomic profiles in healthy adults

scientific article published on May 2008

Effects of an isocaloric healthy Nordic diet on insulin sensitivity, lipid profile and inflammation markers in metabolic syndrome - a randomized study (SYSDIET).

scientific article published on 02 March 2013

Effects of long-term intake of lactotripeptides on cardiovascular risk factors in hypertensive subjects

scientific article published on 23 May 2012

Effects of whole grain, fish and bilberries on serum metabolic profile and lipid transfer protein activities: a randomized trial (Sysdimet).

scientific article

Elevated pro-inflammatory and lipotoxic mucosal lipids characterise irritable bowel syndrome

scientific article

Enhanced liver fibrosis test for the non-invasive diagnosis of fibrosis in patients with NAFLD: A systematic review and meta-analysis

scientific article published on 07 April 2020

Enterovirus-induced gene expression profile is critical for human pancreatic islet destruction

article

Erratum to: COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access

scholarly article published in Metabolomics

Exome sequencing identifies mitochondrial alanyl-tRNA synthetase mutations in infantile mitochondrial cardiomyopathy

scientific article

Exploring the lipoprotein composition using Bayesian regression on serum lipidomic profiles

scientific article published in July 2007

Expression of ceramide-metabolising enzymes in subcutaneous and intra-abdominal human adipose tissue

scientific article

Farnesoid X receptor deficiency improves glucose homeostasis in mouse models of obesity

scientific article

Fatty fish intake decreases lipids related to inflammation and insulin signaling--a lipidomics approach

scientific article

Fatty fish modifies HDL particle size and lipid concentrations

scientific article

Fish oil supplementation alters the plasma lipidomic profile and increases long-chain PUFAs of phospholipids and triglycerides in healthy subjects

scientific article

Functional prediction of unidentified lipids using supervised classifiers

article published in 2009

Gender-dependent progression of systemic metabolic states in early childhood

scientific article published on 3 June 2008

Gene-to-metabolite networks for terpenoid indole alkaloid biosynthesis in Catharanthus roseus cells

scholarly article

Genome-scale metabolic modeling of human CD4+ T cells reveals ceramides as metabolic signature of Th17 and regulatory T-cell differentiation

conference poster

Genome-scale study reveals reduced metabolic adaptability in patients with non-alcoholic fatty liver disease

scientific article published on 3 February 2016

Genome-wide profiling of interleukin-4 and STAT6 transcription factor regulation of human Th2 cell programming

scientific article

Genomic, Transcriptomic, and Lipidomic Profiling Highlights the Role of Inflammation in Individuals With Low High-density Lipoprotein Cholesterol

Global transcript profiles of fat in monozygotic twins discordant for BMI: pathways behind acquired obesity

scientific article

Graphical Multi-way Models

article

Gut metabolome meets microbiome: A methodological perspective to understand the relationship between host and microbe

scientific article published on 30 April 2018

Gut microbiota affects lens and retinal lipid composition.

scientific article published on 8 July 2009

Gut microbiota regulates bile acid metabolism by reducing the levels of tauro-beta-muricholic acid, a naturally occurring FXR antagonist

scientific article

Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950-Metabolites in Frozen Human Plasma.

scientific article published on 6 October 2017

Hepatic ceramides dissociate steatosis and insulin resistance in patients with non-alcoholic fatty liver disease.

scientific article published on 9 January 2016

Hepatic stearoyl-CoA desaturase (SCD)-1 activity and diacylglycerol but not ceramide concentrations are increased in the nonalcoholic human fatty liver

scientific article published on 24 October 2008

Heterogeneous Biological Network Visualization System: Case Study in Context of Medical Image Data ⬇️

scientific article published on January 1, 2012

High density lipoprotein structural changes and drug response in lipidomic profiles following the long-term fenofibrate therapy in the FIELD substudy

scientific article

High-dose simvastatin exhibits enhanced lipid-lowering effects relative to simvastatin/ezetimibe combination therapy

scientific article

How to study lipidomes

scientific article

Human PNPLA3-I148M variant increases hepatic retention of polyunsaturated fatty acids

scientific article published on 22 August 2019

Human Serum Metabolites Associate With Severity and Patient Outcomes in Traumatic Brain Injury

scientific article published on 15 July 2016

Human gut microbes impact host serum metabolome and insulin sensitivity

scientific article

Human tear fluid lipidome: from composition to function

scientific article

Hydroxysteroid 17-β dehydrogenase 13 variant increases phospholipids and protects against fibrosis in nonalcoholic fatty liver disease

scientific article published on 12 March 2020

Hypothalamic AMPK and fatty acid metabolism mediate thyroid regulation of energy balance

scientific article

Hypothalamic AMPK-ER Stress-JNK1 Axis Mediates the Central Actions of Thyroid Hormones on Energy Balance.

scientific article

Identification of a plasma signature of psychotic disorder in children and adolescents from the Avon Longitudinal Study of Parents and Children (ALSPAC) cohort.

scientific article published on 26 September 2017

Imbalance of plasma amino acids, metabolites and lipids in patients with lysinuric protein intolerance (LPI).

scientific article published on 27 May 2016

Impact of Extensively Hydrolyzed Infant Formula on Circulating Lipids During Early Life

scientific article published on 01 January 2022

Impaired hepatic lipid synthesis from polyunsaturated fatty acids in TM6SF2 E167K variant carriers with NAFLD.

scientific article published on 21 February 2017

Improving identification of differentially expressed genes by integrative analysis of Affymetrix and Illumina arrays

scientific article published in January 2006

Increased dihydroceramide/ceramide ratio mediated by defective expression of degs1 impairs adipocyte differentiation and function

scientific article published on 28 October 2014

Informatics and computational strategies for the study of lipids

scientific article published on 25 June 2011

Informatics and computational strategies for the study of lipids.

scientific article

Insulin signaling regulates fatty acid catabolism at the level of CoA activation

scientific article (publication date: 2012)

Integrated Lipidomics and Proteomics Point to Early Blood-Based Changes in Childhood Preceding Later Development of Psychotic Experiences: Evidence From the Avon Longitudinal Study of Parents and Children

scientific article published on 30 January 2019

Integrated model of metabolism and autoimmune response in β-cell death and progression to type 1 diabetes

scientific article

Integrating post-genomic approaches as a strategy to advance our understanding of health and disease.

scientific article published on 30 March 2009

Integration of metabolomics and expression of glycerol-3-phosphate acyltransferase (GPAM) in breast cancer-link to patient survival, hormone receptor status, and metabolic profiling

scientific article published on 15 December 2011

Integration of microRNA miR-122 in hepatic circadian gene expression

scientific article

Integration of transcription and flux data reveals molecular paths associated with differences in oxygen-dependent phenotypes of Saccharomyces cerevisiae

scientific article

Integrative Analysis of Circulating Metabolite Profiles and Magnetic Resonance Imaging Metrics in Patients with Traumatic Brain Injury

scientific article published on 19 February 2020

Integrative analysis of multimodal mass spectrometry data in MZmine 3

Integrative biological analysis of the APOE*3-leiden transgenic mouse

scientific article

Interaction between dietary lipids and gut microbiota regulates hepatic cholesterol metabolism

scientific article published on 18 January 2016

Interfacial properties of high-density lipoprotein-like lipid droplets with different lipid and apolipoprotein A-I compositions.

scientific article

Interpreting the lipidome: bioinformatic approaches to embrace the complexity

scientific article published on 06 June 2021

Isoenergetic diets differing in their n-3 fatty acid and polyphenol content reflect different plasma and HDL-fraction lipidomic profiles in subjects at high cardiovascular risk

scientific article published on 24 June 2014

Ketogenic diet slows down mitochondrial myopathy progression in mice

scientific article published on 17 February 2010

Link between plasma ceramides, inflammation and insulin resistance: association with serum IL-6 concentration in patients with coronary heart disease

scientific article published on 11 August 2009

Linking Gut Microbiome and Lipid Metabolism: Moving beyond Associations

scientific article

Links between central CB1-receptor availability and peripheral endocannabinoids in patients with first episode psychosis

scientific article published on 26 August 2020

Lipidome as a predictive tool in progression to type 2 diabetes in Finnish men.

scientific article published on 20 September 2017

Lipidomic Analyses Reveal Modulation of Lipid Metabolism by the PFAS Perfluoroundecanoic Acid (PFUnDA) in Non-Obese Diabetic Mice

scientific article published on 27 September 2021

Lipidomics in biomedical research-practical considerations

scientific article published on 10 April 2017

Lipidomics in nutrition and food research.

scientific article published on 15 February 2013

Lipidomics-based safety biomarkers for lipid-lowering treatments

scientific article published on April 2008

Lipidomics: a new window to biomedical frontiers.

scientific article published on 23 October 2008

Lipocalin prostaglandin D synthase and PPARγ2 coordinate to regulate carbohydrate and lipid metabolism in vivo

scientific article (publication date: 2012)

Liquid Chromatography-Mass Spectrometry (LC-MS)-Based Lipidomics for Studies of Body Fluids and Tissues

scientific article published on 01 January 2011

Longitudinal plasma metabolic profiles, infant feeding, and islet autoimmunity in the MIDIA study

scientific article published on 21 January 2016

MARC1 variant rs2642438 increases hepatic phosphatidylcholines and decreases severity of non-alcoholic fatty liver disease in humans

scientific article published on 26 May 2020

MPEA—metabolite pathway enrichment analysis

article

MS-Based Lipidomics

MS-based lipidomics of human blood plasma - a community-initiated position paper to develop accepted guidelines

article

MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

scientific article

MZmine: toolbox for processing and visualization of mass spectrometry based molecular profile data

scientific article

Matching samples of multiple views

Meeting highlights from the 2013 European Society of Cardiology Heart Failure Association Winter Meeting on Translational Heart Failure Research

scientific article published on 14 December 2013

Metabolic Modeling of Human Gut Microbiota on a Genome Scale: An Overview

scientific article published on 28 January 2019

Metabolic Signatures of the Exposome-Quantifying the Impact of Exposure to Environmental Chemicals on Human Health

scientific article published on 10 November 2020

Metabolic alterations in immune cells associate with progression to type 1 diabetes

scientific article published on 11 February 2020

Metabolic associations of reduced proliferation and oxidative stress in advanced breast cancer

scientific article

Metabolic regulation in progression to autoimmune diabetes

scientific article

Metabolic transformations of dietary polyphenols: comparison between in vitro colonic and hepatic models and in vivo urinary metabolites

scientific article published on 29 March 2016

Metabolome and fecal microbiota in monozygotic twin pairs discordant for weight: a Big Mac challenge

scientific article

Metabolome in schizophrenia and other psychotic disorders: a general population-based study

scientific article

Metabolomic analysis of plasma metabolites that may mediate effects of rye bread on satiety and weight maintenance in postmenopausal women

scientific article published on 17 November 2010

Metabolomic analysis of polar metabolites in lipoprotein fractions identifies lipoprotein-specific metabolic profiles and their association with insulin resistance

article

Metabolomic approaches to phenotype characterization and applications to complex diseases

scientific article published on July 2006

Metabolomic changes in fatty liver can be modified by dietary protein and calcium during energy restriction

scientific article published on July 2008

Metabolomic strategies to identify tissue-specific effects of cardiovascular drugs

scholarly article by Minna T Jänis et al published June 2008 in Expert Opinion on Drug Metabolism & Toxicology

Metabolomics Analytics Workflow for Epidemiological Research: Perspectives from the Consortium of Metabolomics Studies (COMETS)

scientific article published on 17 July 2019

Metabolomics Profiling As a Diagnostic Tool in Severe Traumatic Brain Injury.

scientific article published on 18 August 2017

Metabolomics enables precision medicine: "A White Paper, Community Perspective"

scientific article

Metabolomics in angiotensin II-induced cardiac hypertrophy

scientific article published on 11 January 2010

Metabolomics in psychosis research

scientific article published in January 2013

Metabolomics in the studies of islet autoimmunity and type 1 diabetes

scientific article

Metabolomics of human breast cancer: new approaches for tumor typing and biomarker discovery

scientific article

Metabolomics, a novel tool for studies of nutrition, metabolism and lipid dysfunction

scientific article published on 18 August 2009

Methods for the differential integrative omic analysis of plasma from a transgenic disease animal model

scientific article published on 01 January 2004

Microbial metabolism of catechin stereoisomers by human faecal microbiota: Comparison of targeted analysis and a non-targeted metabolomics method

article

Mitochondrial myopathy induces a starvation-like response

scientific article published on 23 July 2010

Mitofusin 2 (Mfn2) links mitochondrial and endoplasmic reticulum function with insulin signaling and is essential for normal glucose homeostasis

scientific article published on 16 March 2012

Model of a quasi-one-dimensional spin glass

article

Modeling strategies to study metabolic pathways in progression to type 1 diabetes--Challenges and opportunities

scientific article published on 24 August 2015

Mondo/ChREBP-Mlx-regulated transcriptional network is essential for dietary sugar tolerance in Drosophila

scientific article (publication date: April 2013)

Monounsaturated fatty acids in serum triacylglycerols are associated with response to neoadjuvant chemotherapy in breast cancer patients

scientific article published on 8 October 2013

Multivariate multi-way analysis of multi-source data

scientific article

Noninvasive Detection of Nonalcoholic Steatohepatitis Using Clinical Markers and Circulating Levels of Lipids and Metabolites

scientific article published on 15 June 2016

Normalization method for metabolomics data using optimal selection of multiple internal standards

scientific article

Novel theranostic opportunities offered by characterization of altered membrane lipid metabolism in breast cancer progression

scientific article published on 17 March 2011

Obesity and Diabetes: Lipotoxicity

Obesity and psychotic disorders: uncovering common mechanisms through metabolomics ⬇️

scientific article published on September 1, 2012

Optimizing the lipidomics workflow for clinical studies--practical considerations.

scientific article published on 09 April 2015

Overexpression of PPARγ specifically in pancreatic β-cells exacerbates obesity-induced glucose intolerance, reduces β-cell mass, and alters islet lipid metabolism in male mice

scientific article published on 22 July 2014

Overexpression of vascular endothelial growth factor-B in mouse heart alters cardiac lipid metabolism and induces myocardial hypertrophy

scientific article published on 28 August 2008

PPAR gamma 2 prevents lipotoxicity by controlling adipose tissue expandability and peripheral lipid metabolism

scientific article

PPARγ Modulates Long Chain Fatty Acid Processing in the Intestinal Epithelium

scientific article published on 28 November 2017

Pathways to the analysis of microarray data

scientific article

Peroxisomal and microsomal lipid pathways associated with resistance to hepatic steatosis and reduced pro-inflammatory state

scientific article

Persistent Alterations in Plasma Lipid Profiles Before Introduction of Gluten in the Diet Associated With Progression to Celiac Disease

scientific article published on 01 May 2019

Persistent alterations in plasma lipid profiles prior to introduction of gluten in the diet associate with progression to celiac disease

Persistent postconcussive symptoms in children and adolescents with mild traumatic brain injury receiving initial head computed tomography

scientific article published in 2021

Perspectives on Systems Modeling of Human Peripheral Blood Mononuclear Cells

scientific article published in January 2017

Phenolic metabolites as compliance biomarker for polyphenol intake in a randomized controlled human intervention

Phenotype characterisation using integrated gene transcript, protein and metabolite profiling.

scientific article published in January 2004

Phospholipase PLA2G7, associated with aggressive prostate cancer, promotes prostate cancer cell migration and invasion and is inhibited by statins.

scientific article

Phospholipids and insulin resistance in psychosis: a lipidomics study of twin pairs discordant for schizophrenia

scientific article published on 18 January 2012

Platform for systems medicine research and diagnostic applications in psychotic disorders-The METSY project

scientific article

Poster #170 PROLINE AND SCHIZOPHRENIA: A POPULATION-BASED STUDY

Postprandial differences in the plasma metabolome of healthy Finnish subjects after intake of a sourdough fermented endosperm rye bread versus white wheat bread

scientific article

Prediction of non-alcoholic fatty-liver disease and liver fat content by serum molecular lipids

scientific article published on 04 July 2013

Prenatal exposure to perfluoroalkyl substances modulates neonatal serum phospholipids, increasing risk of type 1 diabetes

scientific article published on 04 July 2020

Processing methods for differential analysis of LC/MS profile data

scientific article

Prolonged sleep restriction induces changes in pathways involved in cholesterol metabolism and inflammatory responses

scientific article

Proteomic-based detection of a protein cluster dysregulated during cardiovascular development identifies biomarkers of congenital heart defects

scientific journal article

Publisher Correction: Building an international consortium for tracking coronavirus health status

scientific article published on 26 June 2020

Quantitative genome-scale metabolic modeling of human CD4+ T cell differentiation reveals subset-specific regulation of glycosphingolipid pathways

scientific article published in 2021

Quantitative profiling of bile acids in blood, adipose tissue, intestine, and gall bladder samples using ultra high performance liquid chromatography-tandem mass spectrometry

Quantitative proteomics analysis of the nuclear fraction of human CD4+ cells in the early phases of IL-4-induced Th2 differentiation

scientific article

Rapid quantitative analysis of carnitine and acylcarnitines by ultra-high performance–hydrophilic interaction liquid chromatography–tandem mass spectrometry

article

Regulation of lipid metabolism in breast cancer provides diagnostic and therapeutic opportunities

Remodeling of central metabolism in invasive breast cancer compared to normal breast tissue - a GC-TOFMS based metabolomics study

scientific article

Reproducible mass spectrometry data processing and compound annotation in MZmine 3

scientific article published on 20 May 2024

Role of Cardiolipins in the Inner Mitochondrial Membrane: Insight Gained through Atom-Scale Simulations

scientific article published on 01 March 2009

Roux-en-Y Gastric Bypass Surgery Induces Early Plasma Metabolomic and Lipidomic Alterations in Humans Associated with Diabetes Remission

scientific article published on 6 May 2015

Saturated Fat Is More Metabolically Harmful for the Human Liver Than Unsaturated Fat or Simple Sugars

scientific article published on 29 May 2018

Searching for Linear Dependencies between Heart Magnetic Resonance Images and Lipid Profiles

Secreted frizzled-related protein 1 regulates adipose tissue expansion and is dysregulated in severe obesity.

scientific article

Serum Lipid and Serum Metabolite Components in relation to anthropometric parameters in EPIC-Potsdam participants

scientific article published on 11 July 2015

Serum Metabolites Associated with Computed Tomography Findings after Traumatic Brain Injury

scientific article published on 15 November 2018

Serum lipidomics meets cardiac magnetic resonance imaging: profiling of subjects at risk of dilated cardiomyopathy

scientific article

Serum metabolite profile associates with the development of metabolic co-morbidities in first-episode psychosis

scientific article

Serum metabolome associated with severity of acute traumatic brain injury

scholarly article

Serum saturated fatty acids containing triacylglycerols are better markers of insulin resistance than total serum triacylglycerol concentrations.

scientific article published on 13 February 2009

Serum, plasma and erythrocyte membrane lipidomes in infants fed formula supplemented with bovine milk fat globule membranes

scientific article published on 04 August 2018

Simultaneous determination of perfluoroalkyl substances and bile acids in human serum using ultra-high-performance liquid chromatography-tandem mass spectrometry

scientific article published on 23 November 2019

Specific correlations between relative synonymous codon usage and protein secondary structure

scientific article published in August 1998

Sphingolipids and glycerophospholipids - The "ying and yang" of lipotoxicity in metabolic diseases.

scientific article published on 16 January 2017

Splanchnic balance of free fatty acids, endocannabinoids, and lipids in subjects with nonalcoholic fatty liver disease

scientific article published on 27 June 2010

Survey of muscle characteristics after statin-induced rhabdomyolysis

Systematic construction of gene coexpression networks with applications to human T helper cell differentiation process

scientific article

Systems Biology in Food and Nutrition Research

article published in 2013

Systems Biology in Human Health and Disease

article

Systems biology approaches to study lipidomes in health and disease

scientific article published on 02 December 2020

Systems biology strategies to study lipidomes in health and disease.

scientific article published on July 2014

Systems biology strategy to study lipotoxicity and the metabolic syndrome

scientific article

Systems medicine and the integration of bioinformatic tools for the diagnosis of Alzheimer's disease

scientific article published on January 2009

T-cell activation induces selective changes of cellular lipidome

scientific article

Targeted Clinical Metabolite Profiling Platform for the Stratification of Diabetic Patients

scientific article published on 14 September 2019

Targeted Serum Metabolite Profiling Identifies Metabolic Signatures in Patients with Alzheimer's Disease, Normal Pressure Hydrocephalus and Brain Tumor

scientific article published in January 2017

The Consortium of Metabolomics Studies (COMETS): Metabolomics in 47 Prospective Cohort Studies

scientific article published on 01 June 2019

The DEXLIFE study methods: identifying novel candidate biomarkers that predict progression to type 2 diabetes in high risk individuals.

scientific article

The Dynamics of the Human Infant Gut Microbiome in Development and in Progression toward Type 1 Diabetes

scholarly article published by Päivi Pöhö in 2016

The MBOAT7 variant rs641738 alters hepatic phosphatidylinositols and increases severity of non-alcoholic fatty liver disease in humans.

scientific article

The Metabolome in Finnish Carriers of the MYBPC3-Q1061X Mutation for Hypertrophic Cardiomyopathy

scientific article published on 12 August 2015

The PNPLA3-I148M variant increases polyunsaturated triglycerides in human adipose tissue

scientific article published on 09 May 2020

The PredictAD project: development of novel biomarkers and analysis software for early diagnosis of the Alzheimer's disease

scientific article published on April 2013

The circulating metabolites in the progression to islet autoimmunity and type 1 diabetes

conference poster

The dynamics of the human infant gut microbiome in development and in progression toward type 1 diabetes

scientific article published on 5 February 2015

The effect of atorvastatin treatment on serum oxysterol concentrations and cytochrome P450 3A4 activity.

scientific article

The effect of fatty or lean fish intake on inflammatory gene expression in peripheral blood mononuclear cells of patients with coronary heart disease

scientific article

The gut microbiota modulates glycaemic control and serum metabolite profiles in non-obese diabetic mice

scientific article

The gut microbiota modulates host energy and lipid metabolism in mice

scientific article

The influence of sample collection methodology and sample preprocessing on the blood metabolic profile

scientific article published on 01 January 2015

The link between nutritional status and insulin sensitivity is dependent on the adipocyte-specific peroxisome proliferator-activated receptor-gamma2 isoform

scientific article

Tracing specific synonymous codon-secondary structure correlations through evolution.

scientific article published in April 2003

Transcriptomic profiling across the nonalcoholic fatty liver disease spectrum reveals gene signatures for steatohepatitis and fibrosis

scientific article published on 01 December 2020

Triacylglycerol fatty acid composition in diet-induced weight loss in subjects with abnormal glucose metabolism--the GENOBIN study

scientific article

Two-way analysis of high-dimensional collinear data

article

Use of Blood Biomarkers in the Assessment of Sports-Related Concussion-A Systematic Review in the Context of Their Biological Significance

scientific article published on 12 October 2017

Whole grain products, fish and bilberries alter glucose and lipid metabolism in a randomized, controlled trial: the Sysdimet study

scientific article

Paulina is supported by:

About Paulina

Help