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List of works by Claire E. Eyers

A novel approach to the analysis of SUMOylation with the independent use of trypsin and elastase digestion followed by database searching utilising consecutive residue addition to lysine

scientific article published in January 2013

A quantitative and temporal map of proteostasis during heat shock in Saccharomyces cerevisiae

scientific article published on 16 January 2018

Absolute protein quantification of the yeast chaperome under conditions of heat shock

scientific article published on 2 June 2016

Absolute quantification of the glycolytic pathway in yeast: deployment of a complete QconCAT approach

scientific article

Advancing Solutions to the Carbohydrate Sequencing Challenge

scientific article published on 21 August 2019

All systems are go.

scientific article published on 15 May 2008

Analysis of Intrinsic Peptide Detectability via Integrated Label-Free and SRM-Based Absolute Quantitative Proteomics.

scientific article published on 25 July 2016

Analysis of post-translational modifications by LC-MS/MS.

scientific article published on January 2010

Applications of ion mobility mass spectrometry for high throughput, high resolution glycan analysis.

scientific article published on 4 February 2016

Attempting to rewrite History: challenges with the analysis of histidine-phosphorylated peptides

scientific article

Aurora A regulation by reversible cysteine oxidation reveals evolutionarily conserved redox control of Ser/Thr protein kinase activity

scientific article published on 07 July 2020

Bottom-Up Elucidation of Glycosidic Bond Stereochemistry.

scientific article published on 28 March 2017

CONSeQuence: prediction of reference peptides for absolute quantitative proteomics using consensus machine learning approaches

scientific article

Covalent inhibitors of EGFR family protein kinases induce degradation of human Tribbles 2 (TRIB2) pseudokinase in cancer cells.

scientific article published on 25 September 2018

DOSCATs: Double standards for protein quantification ⬇️

scientific article

Diauxic shift-dependent relocalization of decapping activators Dhh1 and Pat1 to polysomal complexes

scientific article published on 28 June 2011

Direct and Absolute Quantification of over 1800 Yeast Proteins via Selected Reaction Monitoring.

scientific article published on 10 January 2016

Discrimination of epimeric glycans and glycopeptides using IM-MS and its potential for carbohydrate sequencing.

scientific article published on 8 December 2013

Dual purpose S-trityl-linkers for glycoarray fabrication on both polystyrene and gold

scientific article published in November 2012

Dynamic phosphorylation of RelA on Ser42 and Ser45 in response to TNFα stimulation regulates DNA binding and transcription.

scientific article published on July 2016

Enzymatic reactions on immobilised substrates

scientific article

Eukaryotic elongation factor 2 kinase activity is controlled by multiple inputs from oncogenic signaling

scientific article

Evaluation of Parameters for Confident Phosphorylation Site Localization Using an Orbitrap Fusion Tribrid Mass Spectrometer

scientific article

Evaluation of dimethyl sulfoxide (DMSO) as a mobile phase additive during top 3 label-free quantitative proteomics

scientific article

Exploring the Conformational Landscape and Stability of Aurora A Using Ion-Mobility Mass Spectrometry and Molecular Modeling

scientific article published on 31 January 2022

Extensive non-canonical phosphorylation in human cells revealed using strong-anion exchange-mediated phosphoproteomics

Focus on Quantitative Proteomics

article

Formation of carbohydrate-functionalised polystyrene and glass slides and their analysis by MALDI-TOF MS.

scientific article published on 21 May 2012

Gas-phase intermolecular phosphate transfer within a phosphohistidine phosphopeptide dimer

scientific article

Human CDK18 promotes replication stress signaling and genome stability

scientific article published on 5 July 2016

Identification of a lacosamide binding protein using an affinity bait and chemical reporter strategy: 14-3-3 ζ.

scientific article

Identification of novel phosphorylation sites on Xenopus laevis Aurora A and analysis of phosphopeptide enrichment by immobilized metal-affinity chromatography

scientific article published on 27 July 2003

KinView: a visual comparative sequence analysis tool for integrated kinome research

scientific article published on 12 October 2016

Label-Free Discovery Array Platform for the Characterization of Glycan Binding Proteins and Glycoproteins.

scientific article

Lacosamide isothiocyanate-based agents: novel agents to target and identify lacosamide receptors

scientific article

Local protein kinase A action proceeds through intact holoenzymes.

scientific article published in June 2017

Mass Spectrometric-Based Quantitative Proteomics Using SILAC

scientific article published on 01 January 2011

Myoblast Phosphoproteomics as a Tool to Investigate Global Signaling Events During Myogenesis

scientific article published on 01 January 2019

New tools for carbohydrate sulfation analysis: heparan sulfate 2--sulfotransferase (HS2ST) is a target for small-molecule protein kinase inhibitors

article

New tools for evaluating protein tyrosine sulfation: tyrosylprotein sulfotransferases (TPSTs) are novel targets for RAF protein kinase inhibitors

article

Peptide detectability following ESI mass spectrometry

Peptide scrambling during collision-induced dissociation is influenced by N-terminal residue basicity

scientific article published on 19 August 2014

Plk4 and Aurora A cooperate in the initiation of acentriolar spindle assembly in mammalian oocytes

scientific article published on 28 September 2017

Probing the exposure of the phosphate group in modified amino acids and peptides by ion-molecule reactions with triethoxyborane in Fourier transform ion cyclotron resonance mass spectrometry

scientific article published in May 2014

Profiling the Human Phosphoproteome to Estimate the True Extent of Protein Phosphorylation

scientific article published on 09 May 2022

Proposal for a common nomenclature for peptide fragment ions generated following sequence scrambling during collision-induced dissociation

scientific article published in January 2012

Protein Structure

Proteomic analysis of dietary restriction in yeast reveals a role for Hsp26 in replicative lifespan extension

scientific article published in 2021

QCAL--a novel standard for assessing instrument conditions for proteome analysis

scientific article

QconCAT Standard for Calibration of Ion Mobility-Mass Spectrometry Systems

article

Quantification of proteins and their modifications using QconCAT technology

scientific article

Quantitative proteomics and network analysis of SSA1 and SSB1 deletion mutants reveals robustness of chaperone HSP70 network in Saccharomyces cerevisiae

scientific article published on 16 February 2015

RePLiCal: A QconCAT Protein for Retention Time Standardization in Proteomics Studies

scientific article published on 18 January 2016

Repurposing covalent EGFR/HER2 inhibitors for on-target degradation of human Tribbles 2 (TRIB2) pseudokinase

Rigorous determination of the stoichiometry of protein phosphorylation using mass spectrometry

scientific article published on 27 August 2009

Strong anion exchange-mediated phosphoproteomics reveals extensive human non-canonical phosphorylation

scientific article published on 21 August 2019

Temporal modulation of the NF-κB RelA network in response to different types of DNA damage

scientific article published on 01 February 2021

The N-methylated peptide SEN304 powerfully inhibits Aβ(1-42) toxicity by perturbing oligomer formation

scientific article published on 12 October 2012

The Tribbles 2 (TRB2) pseudokinase binds to ATP and autophosphorylates in a metal-independent manner

scientific article (publication date: April 2015)

The nitrosated bile acid DNA lesion O6-carboxymethylguanine is a substrate for the human DNA repair protein O6-methylguanine-DNA methyltransferase

scientific article

The phosphorylation of CapZ-interacting protein (CapZIP) by stress-activated protein kinases triggers its dissociation from CapZ

scientific article

The power of ion mobility-mass spectrometry for structural characterization and the study of conformational dynamics

scientific article published on April 2014

The use of selected reaction monitoring in quantitative proteomics

scientific article published on July 2012

Top-down mass spectrometry for the analysis of combinatorial post-translational modifications

scientific article

Unblocking the sink: improved CID-based analysis of phosphorylated peptides by enzymatic removal of the basic C-terminal residue.

scientific article published on 3 December 2013

cAMP-dependent protein kinase (PKA) complexes probed by complementary differential scanning fluorimetry and ion mobility-mass spectrometry

scientific article (publication date: October 2016)

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