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List of works by Michele Caselle

A Topic Modeling Analysis of TCGA Breast and Lung Cancer Transcriptomic Data

scientific article published on 16 December 2020

A combination of transcriptional and microRNA regulation improves the stability of the relative concentrations of target genes.

scientific article

A curated database of miRNA mediated feed-forward loops involving MYC as master regulator

scientific article

A new approach for the identification of processed pseudogenes

scientific article published in May 2010

A new class of solutions of the Dorokhov–Mello–Pereyra–Kumar equation

A new computational approach to analyze human protein complexes and predict novel protein interactions.

scientific article

Ab initio identification of putative human transcription factor binding sites by comparative genomics

scientific article

Alteration of ROS homeostasis and decreased lifespan in S. cerevisiae elicited by deletion of the mitochondrial translocator FLX1.

scientific article published on 8 May 2014

Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrepresented upstream motifs

scientific article

Correlated fragile site expression allows the identification of candidate fragile genes involved in immunity and associated with carcinogenesis

scientific article published on 18 September 2006

Correlating overrepresented upstream motifs to gene expression: a computational approach to regulatory element discovery in eukaryotes

scientific article

Deconfinement transition in large-N lattice gauge theory

Deep sequencing of the X chromosome reveals the proliferation history of colorectal adenomas

scientific article

Detection of gene communities in multi-networks reveals cancer drivers

scientific article

Distribution of Transmission Eigenvalues in Disordered Wires

scientific article published on 01 April 1995

Dynamic modeling of miRNA-mediated feed-forward loops

scientific article published in February 2012

Entropic contributions to the splicing process

scientific article published on 24 November 2009

Exact solution of D = 1 Kazakov-Migdal induced gauge theory

article published in 1992

Finite-temperature behavior of glueballs in lattice gauge theories

scientific article published on 24 September 2013

Gene autoregulation via intronic microRNAs and its functions

scientific article

Genome-wide activity of unliganded estrogen receptor-α in breast cancer cells.

scientific article published on 17 March 2014

Genome-wide survey of microRNA-transcription factor feed-forward regulatory circuits in human.

scientific article

Horizontal gene transfers as metagenomic gene duplications

article

Identification of DNA-binding protein target sequences by physical effective energy functions: free energy analysis of lambda repressor-DNA complexes

scientific article

Identification of altered biological processes in heterogeneous RNA-sequencing data by discretization of expression profiles

scientific article published on 01 February 2020

Identification of candidate regulatory sequences in mammalian 3' UTRs by statistical analysis of oligonucleotide distributions

scientific article

Identification of functional TFAP2A and SP1 binding sites in new TFAP2A-modulated genes

scientific article

Identification of microRNA clusters cooperatively acting on Epithelial to Mesenchymal Transition in Triple Negative Breast Cancer

Identity and divergence of protein domain architectures after the yeast whole-genome duplication event.

scientific article published on 26 August 2010

Interplay of microRNA and epigenetic regulation in the human regulatory network

scientific article published on 6 October 2014

Investigating dynamic and energetic determinants of protein nucleic acid recognition: analysis of the zinc finger zif268-DNA complexes ⬇️

scientific article published on November 24, 2010

Ising-model description of long-range correlations in DNA sequences ⬇️

scientific article published on 08 May 2015

Kazakov-Migdal induced gauge theory and the coupling of 2d quantum gravity to d=1 matter

Line defects in the 3d Ising model

article

MicroRNA-mRNA interactions underlying colorectal cancer molecular subtypes.

scientific article

Molecular Inverse Comorbidity between Alzheimer's Disease and Lung Cancer: New Insights from Matrix Factorization

scientific article published on 26 June 2019

Molecular and morphologic characterization of superficial- and deep-subcutaneous adipose tissue subdivisions in human obesity.

scientific article published on 11 June 2013

Molecular models for intrastrand DNA G-quadruplexes

scientific article

Non-analyticity of the Callan-Symanzik β-function of two-dimensional O(N) models

Nucleation dynamics in two-dimensional cylindrical Ising models and chemotaxis

scientific article published on 08 February 2010

Ordered structure of the transcription network inherited from the yeast whole-genome duplication

scientific article

The Kazakov-Migdal model as a high temperature lattice gauge theory

The impact of whole genome duplications on the human gene regulatory networks

scientific article published on 06 December 2021

The role of Transposable Elements in shaping the combinatorial interaction of Transcription Factors

scientific article (publication date: 16 August 2012)

The role of incoherent microRNA-mediated feedforward loops in noise buffering

scientific article

Two-dimensional QCD is a one-dimensional Kazakov-Migdal model

Universal power law behaviors in genomic sequences and evolutionary models.

scientific article published on 2 August 2007

Universality of certain nonrenormalizable contributions in two-dimensional quantum field theory

scientific article published on 01 October 1996

m6A-Dependent RNA Dynamics in T Cell Differentiation

article

miR-214 and miR-148b Targeting Inhibits Dissemination of Melanoma and Breast Cancer.

scientific article

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