List of works - Matteo Ramazzotti

A computational approach for identifying the chemical factors involved in the glycosaminoglycans-mediated acceleration of amyloid fibril formation

scientific article

A computational pipeline to discover highly phylogenetically informative genes in sequenced genomes: application to Saccharomyces cerevisiae natural strains

scientific article published on 20 January 2012

A pilot study on ocular safety of intravitreal infliximab in a rabbit model.

scientific article published in March 2008

ACYP1 gene possesses two alternative splicing forms that induce apoptosis

scientific article (publication date: 2004)

Aggregation propensity of the human proteome

scientific article

Amyloid formation of a protein in the absence of initial unfolding and destabilization of the native state.

scientific article published on 16 September 2005

Analytic investigations on protein content in refined seed oils: implications in food allergy

scientific article published on 15 August 2008

Angiotensin II upregulates renin-angiotensin system in human isolated T lymphocytes

scientific article published on 3 August 2008

Annona cherimola Miller Fruit as a Promising Candidate against Diabetic Complications: An In Vitro Study and Preliminary Clinical Results

scientific article published on 24 September 2020

Bioactive Compounds from Posidonia oceanica (L.) Delile Impair Malignant Cell Migration through Autophagy Modulation.

scientific article published on 21 April 2018

Bioinformatic approaches for functional annotation and pathway inference in metagenomics data

scientific article

Catechol-Containing Hydroxylated Biomimetic 4-Thiaflavanes as Inhibitors of Amyloid Aggregation.

scientific article published on 9 May 2017

Characterization of a novel Drosophila melanogaster acylphosphatase

scientific article

Chitinase 3-like-1 is produced by human Th17 cells and correlates with the level of inflammation in juvenile idiopathic arthritis patients

scientific article published on 8 November 2016

Comparative immunophenotyping of Saccharomyces cerevisiae and Candida spp. strains from Crohn's disease patients and their interactions with the gut microbiome

scientific article published on 26 January 2020

Diet, Environments, and Gut Microbiota. A Preliminary Investigation in Children Living in Rural and Urban Burkina Faso and Italy.

scientific article published on 13 October 2017

Entropy calculator: getting the best from your multiple protein alignments

scientific article published on 01 March 2004

Eomes controls the development of Th17-derived (non-classic) Th1 cells during chronic inflammation

article

From the Evolution of Protein Sequences Able to Resist Self-Assembly to the Prediction of Aggregation Propensity

scientific article published on 27 October 2016

Glycine residues appear to be evolutionarily conserved for their ability to inhibit aggregation

scientific article

Human recombinant domain antibodies against multiple sclerosis antigenic peptide CSF114(Glc).

scientific article

Hydrophilic extract from Posidonia oceanica inhibits activity and expression of gelatinases and prevents HT1080 human fibrosarcoma cell line invasion

scientific article (publication date: 2015)

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

scientific article

Insight into molecular and functional properties of NMNAT3 reveals new hints of NAD homeostasis within human mitochondria

scientific article

Intravitreal infliximab clearance in a rabbit model: different sampling methods and assay techniques

scientific article published on 27 May 2009

Mechanisms for the inhibition of amyloid aggregation by small ligands.

scientific article

Mesenchymal to amoeboid transition is associated with stem-like features of melanoma cells

scientific article

Molecular insights into cell toxicity of a novel familial amyloidogenic variant of β2-microglobulin

scientific article published on 18 March 2016

Musculin inhibits human T-helper 17 cell response to interleukin 2 by controlling STAT5B activity

scientific article published on 14 June 2017

NMR solution structure of the acylphosphatase from Escherichia coli.

scientific article published on 5 October 2006

Nature and significance of the interactions between amyloid fibrils and biological polyelectrolytes.

scientific article published in October 2006

Oxadiazon affects the expression and activity of aldehyde dehydrogenase and acylphosphatase in human striatal precursor cells: a possible role in neurotoxicity

scientific article published on 01 November 2018

Polyglutamine repeats are associated to specific sequence biases that are conserved among eukaryotes.

scientific article

Population genomics ofSaccharomyces cerevisiaehuman isolates: passengers, colonizers, invaders

Population genomics reveals evolution and variation of Saccharomyces cerevisiae in the human and insects gut

scientific article published on 21 November 2018

Prediction of amyloid aggregation in vivo

scientific article published on July 2011

Selection of antibody fragments specific for an alpha-helix region of acylphosphatase.

scientific article published in January 2004

Significant and Conflicting Correlation of IL-9 With <i>Prevotella</i> and <i>Bacteroides</i> in Human Colorectal Cancer

scientific article published on 08 January 2021

Stromal-induced downregulation of miR-1247 promotes prostate cancer malignancy

Survival of metastatic melanoma patients after dendritic cell vaccination correlates with expression of leukocyte phosphatidylethanolamine-binding protein 1/Raf kinase inhibitory protein

scientific article published on 27 June 2017

Systemic oxidative stress in congenital central hypoventilation syndrome

scientific article published on 15 November 2018

The In Vitro Anti-amyloidogenic Activity of the Mediterranean Red Seaweed Halopithys Incurva

scientific article published on 07 August 2020

The distribution of residues in a polypeptide sequence is a determinant of aggregation optimized by evolution.

scientific article

The folding process of acylphosphatase from Escherichia coli is remarkably accelerated by the presence of a disulfide bond.

scientific article published on 30 April 2008

The intrachain disulfide bridge is responsible of the unusual stability properties of novel acylphosphatase from Escherichia coli

scientific article published on 28 November 2006

The polyphenol Oleuropein aglycone hinders the growth of toxic transthyretin amyloid assemblies.

scientific article published on 12 January 2016

Three-dimensional structural characterization of a novel Drosophila melanogaster acylphosphatase.

scientific article

Toxicity of protein oligomers is rationalized by a function combining size and surface hydrophobicity

scientific article published on 11 August 2014

Uncommon clinical presentations of pheochromocytoma and paraganglioma in two different patients affected by two distinct novel VHL germline mutations

scientific article published on 19 November 2007

XYLab: an interactive plotting tool for mixed multivariate data observation and interpretation.

scientific article

recluster: an unbiased clustering procedure for beta-diversity turnover

scientific article published in 2013

riboFrame: An Improved Method for Microbial Taxonomy Profiling from Non-Targeted Metagenomics

scientific article

List of works by Matteo Ramazzotti

A computational approach for identifying the chemical factors involved in the glycosaminoglycans-mediated acceleration of amyloid fibril formation

A computational pipeline to discover highly phylogenetically informative genes in sequenced genomes: application to Saccharomyces cerevisiae natural strains

A pilot study on ocular safety of intravitreal infliximab in a rabbit model.

ACYP1 gene possesses two alternative splicing forms that induce apoptosis

Aggregation propensity of the human proteome

Amyloid formation of a protein in the absence of initial unfolding and destabilization of the native state.

Analytic investigations on protein content in refined seed oils: implications in food allergy

Angiotensin II upregulates renin-angiotensin system in human isolated T lymphocytes

Annona cherimola Miller Fruit as a Promising Candidate against Diabetic Complications: An In Vitro Study and Preliminary Clinical Results

Bioactive Compounds from Posidonia oceanica (L.) Delile Impair Malignant Cell Migration through Autophagy Modulation.

Bioinformatic approaches for functional annotation and pathway inference in metagenomics data

Catechol-Containing Hydroxylated Biomimetic 4-Thiaflavanes as Inhibitors of Amyloid Aggregation.

Characterization of a novel Drosophila melanogaster acylphosphatase

Chitinase 3-like-1 is produced by human Th17 cells and correlates with the level of inflammation in juvenile idiopathic arthritis patients

Comparative immunophenotyping of Saccharomyces cerevisiae and Candida spp. strains from Crohn's disease patients and their interactions with the gut microbiome

Diet, Environments, and Gut Microbiota. A Preliminary Investigation in Children Living in Rural and Urban Burkina Faso and Italy.

Entropy calculator: getting the best from your multiple protein alignments

Eomes controls the development of Th17-derived (non-classic) Th1 cells during chronic inflammation

From the Evolution of Protein Sequences Able to Resist Self-Assembly to the Prediction of Aggregation Propensity

Glycine residues appear to be evolutionarily conserved for their ability to inhibit aggregation

Human recombinant domain antibodies against multiple sclerosis antigenic peptide CSF114(Glc).

Hydrophilic extract from Posidonia oceanica inhibits activity and expression of gelatinases and prevents HT1080 human fibrosarcoma cell line invasion

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

Insight into molecular and functional properties of NMNAT3 reveals new hints of NAD homeostasis within human mitochondria

Intravitreal infliximab clearance in a rabbit model: different sampling methods and assay techniques

Mechanisms for the inhibition of amyloid aggregation by small ligands.

Mesenchymal to amoeboid transition is associated with stem-like features of melanoma cells

Molecular insights into cell toxicity of a novel familial amyloidogenic variant of β2-microglobulin

Musculin inhibits human T-helper 17 cell response to interleukin 2 by controlling STAT5B activity

NMR solution structure of the acylphosphatase from Escherichia coli.

Nature and significance of the interactions between amyloid fibrils and biological polyelectrolytes.

Oxadiazon affects the expression and activity of aldehyde dehydrogenase and acylphosphatase in human striatal precursor cells: a possible role in neurotoxicity

Polyglutamine repeats are associated to specific sequence biases that are conserved among eukaryotes.

Population genomics ofSaccharomyces cerevisiaehuman isolates: passengers, colonizers, invaders

Population genomics reveals evolution and variation of Saccharomyces cerevisiae in the human and insects gut

Prediction of amyloid aggregation in vivo

Selection of antibody fragments specific for an alpha-helix region of acylphosphatase.

Significant and Conflicting Correlation of IL-9 With <i>Prevotella</i> and <i>Bacteroides</i> in Human Colorectal Cancer

Stromal-induced downregulation of miR-1247 promotes prostate cancer malignancy

Survival of metastatic melanoma patients after dendritic cell vaccination correlates with expression of leukocyte phosphatidylethanolamine-binding protein 1/Raf kinase inhibitory protein

Systemic oxidative stress in congenital central hypoventilation syndrome

The In Vitro Anti-amyloidogenic Activity of the Mediterranean Red Seaweed Halopithys Incurva

The distribution of residues in a polypeptide sequence is a determinant of aggregation optimized by evolution.

The folding process of acylphosphatase from Escherichia coli is remarkably accelerated by the presence of a disulfide bond.

The intrachain disulfide bridge is responsible of the unusual stability properties of novel acylphosphatase from Escherichia coli

The polyphenol Oleuropein aglycone hinders the growth of toxic transthyretin amyloid assemblies.

Three-dimensional structural characterization of a novel Drosophila melanogaster acylphosphatase.

Toxicity of protein oligomers is rationalized by a function combining size and surface hydrophobicity

Uncommon clinical presentations of pheochromocytoma and paraganglioma in two different patients affected by two distinct novel VHL germline mutations

XYLab: an interactive plotting tool for mixed multivariate data observation and interpretation.

recluster: an unbiased clustering procedure for beta-diversity turnover

riboFrame: An Improved Method for Microbial Taxonomy Profiling from Non-Targeted Metagenomics