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List of works by Jay J Thelen

"Scanning mutagenesis" of the amino acid sequences flanking phosphorylation site 1 of the mitochondrial pyruvate dehydrogenase complex

scientific article published on 16 July 2012

A Family of Negative Regulators Targets the Committed Step of De novo Fatty Acid Biosynthesis

scientific article published on 24 August 2016

A Soybean Acyl Carrier Protein, GmACP, Is Important for Root Nodule Symbiosis

scientific article published on 01 May 2014

A high-resolution two dimensional Gel- and Pro-Q DPS-based proteomics workflow for phosphoprotein identification and quantitative profiling.

scientific article published on January 2009

A laser ablation ICP-MS based method for multiplexed immunoblot analysis: applications to manganese-dependent protein dynamics of photosystem II in barley (Hordeum vulgare L.).

scientific article published on August 2015

A modified data normalization method for GC-MS-based metabolomics to minimize batch variation

scientific article

A quantitative mass spectrometry-based approach for identifying protein kinase clients and quantifying kinase activity

scientific article

A systematic proteomic study of seed filling in soybean. Establishment of high-resolution two-dimensional reference maps, expression profiles, and an interactive proteome database.

scientific article

A systems-wide comparison of red rice (Oryza longistaminata) tissues identifies rhizome specific genes and proteins that are targets for cultivated rice improvement ⬇️

scientific article

A versatile mass spectrometry-based method to both identify kinase client-relationships and characterize signaling network topology.

scientific article

ACYL-LIPID DESATURASE2 is required for chilling and freezing tolerance in Arabidopsis

scientific article published on 12 April 2013

Acyl-lipid desaturase 1 primes cold acclimation response in Arabidopsis

scientific article published on 8 April 2016

Arabidopsis genes involved in acyl lipid metabolism. A 2003 census of the candidates, a study of the distribution of expressed sequence tags in organs, and a web-based database.

scientific article published in June 2003

Biochemical approaches for discovering protein-protein interactions.

scientific article published on February 2008

Biochemistry, proteomics, and phosphoproteomics of plant mitochondria from non-photosynthetic cells

scientific article published on 13 March 2013

Biotin carboxyl carrier protein isoforms in Brassicaceae oilseeds

scientific article published in 2000

Biotin carboxyl carrier protein isoforms in Brassicaceae oilseeds

scientific article published on 01 December 2000

Both antisense and sense expression of biotin carboxyl carrier protein isoform 2 inactivates the plastid acetyl-coenzyme A carboxylase in Arabidopsis thaliana

scientific article

Brassicaceae express multiple isoforms of biotin carboxyl carrier protein in a tissue-specific manner

scientific article

Characteristics and safety assessment of intractable proteins in genetically modified crops

scientific article published on 22 March 2014

Characterization of cyclopropane fatty-acid synthase from Sterculia foetida

scientific article

Circles within circles: crosstalk between protein Ser/Thr/Tyr-phosphorylation and Met oxidation

scientific article

Comparative proteomic analysis of developing rhizomes of the ancient vascular plant Equisetum hyemale and different monocot species

scientific article published on 5 March 2015

Comparative proteomic analysis provides insight into the biological role of protein phosphatase inhibitor-2 from Arabidopsis

scientific article published on 10 June 2017

Convergent signaling pathways--interaction between methionine oxidation and serine/threonine/tyrosine O-phosphorylation

scientific article

Development of a simplified, economical polyacrylamide gel staining protocol for phosphoproteins

scientific article published in December 2005

Development of an isoform-specific tandem mass spectrometry assay for absolute quantitation of maize lipid transfer proteins

scientific article published on 15 January 2015

Differential proteome analysis of mature and germinated embryos of Araucaria angustifolia

scientific article published on 27 January 2011

Docking of acetyl-CoA carboxylase to the plastid envelope membrane attenuates fatty acid production in plants

scientific article published on 03 December 2020

Editorial

scientific article published on 24 December 2016

Embryogenic Competence Acquisition in Sugar Cane Callus Is Associated with Differential H+-Pump Abundance and Activity

scientific article published on 05 July 2018

Environmental Effects on Allergen Levels in Commercially Grown Non-Genetically Modified Soybeans: Assessing Variation Across North America ⬇️

scientific article published on August 27, 2012

Erratum: Genome sequence of the palaeopolyploid soybean

scientific article published in Nature

Evolution of seed allergen quantification--from antibodies to mass spectrometry.

scientific article published on 11 July 2010

Genome sequence of the palaeopolyploid soybean

scientific article

Genomically biased accumulation of seed storage proteins in allopolyploid cotton.

scientific article published on 6 September 2011

Global and targeted proteomics in developing jack bean (Canavalia ensiformis) seedlings: an investigation of urease isoforms mobilization in early stages of development

scientific article published on 27 October 2010

Global quantitative proteomics using spectral counting: an inexpensive experimental and bioinformatics workflow for deep proteome coverage

scientific article

Histidine Modifying Agents Abolish Pyruvate Dehydrogenase Kinase Activity

scientific article published on 01 January 2000

In Vivo Quantitative Monitoring of Subunit Stoichiometry for Metabolic Complexes

scientific article published on 27 March 2018

In silico analysis of protein Lys-N(𝜀)-acetylation in plants

scientific article

In-depth investigation of the soybean seed-filling proteome and comparison with a parallel study of rapeseed

scientific article published on 3 July 2008

Initial description of the developing soybean seed protein Lys-N(ε)-acetylome

scientific article published on 7 November 2013

Is Lys-Nɛ-acetylation the next big thing in post-translational modifications?

scientific article published on 25 May 2014

KiC assay: a quantitative mass spectrometry-based approach for kinase client screening and activity analysis [corrected].

scientific article

Label-Free Quantitative Phosphoproteomics Reveals Signaling Dynamics Involved in Embryogenic Competence Acquisition in Sugarcane

scientific article published on 23 September 2020

Large Scale Identification and Quantitative Profiling of Phosphoproteins Expressed during Seed Filling in Oilseed Rape

scientific article published on 06 July 2006

Large-scale proteome comparative analysis of developing rhizomes of the ancient vascular plant equisetum hyemale

scientific article (publication date: 2012)

Mapping the lipoylation site of Arabidopsis thaliana plastidial dihydrolipoamide S-acetyltransferase using mass spectrometry and site-directed mutagenesis.

scientific article

Metabolic engineering of fatty acid biosynthesis in plants.

scientific article

Modulation of protein phosphorylation, N-glycosylation and Lys-acetylation in grape (Vitis vinifera) mesocarp and exocarp owing to Lobesia botrana infection

scientific article

Molecular analysis of two pyruvate dehydrogenase kinases from maize.

scientific article

Molecular cloning and expression analysis of the mitochondrial pyruvate dehydrogenase from maize.

scientific article

Multisite phosphorylation of 14-3-3 proteins by calcium-dependent protein kinases.

scientific article

Musite, a tool for global prediction of general and kinase-specific phosphorylation sites.

scientific article

Next-generation sequencing-based transcriptomic and proteomic analysis of the common reed, Phragmites australis (Poaceae), reveals genes involved in invasiveness and rhizome specificity

scientific article

Overexpression of pea α‐carboxyltransferase in Arabidopsis and camelina increases fatty acid synthesis leading to improved seed oil content

scientific article published on 27 March 2022

P(3)DB: An Integrated Database for Plant Protein Phosphorylation.

scientific article

Partial Purification and Characterization of the Maize Mitochondrial Pyruvate Dehydrogenase Complex1 ⬇️

scientific article published on April 1, 1998

Phosphoproteomic analysis of seed maturation in Arabidopsis, rapeseed, and soybean

scientific article published on 22 March 2012

Plastid uridine salvage activity is required for photoassimilate allocation and partitioning in Arabidopsis

scientific article published on 9 August 2011

Predicting and analyzing protein phosphorylation sites in plants using musite

scientific article

Protein and lipid composition analysis of oil bodies from two Brassica napus cultivars

article

Proteome analysis of cold acclimation in sunflower

scientific article published on 17 March 2011

Proteome analysis of leaves of the desiccation-tolerant grass, Sporobolus stapfianus, in response to dehydration

scientific article

Proteome databases and other online resources for chloroplast research in Arabidopsis

scientific article published on January 2011

Proteomic Analysis of Near-Isogenic Sunflower Varieties Differing in Seed Oil Traits

scientific article published on 20 June 2007

Proteomic Comparison of Plastids from Developing Embryos and Leaves of Brassica napus

scientific article published on 18 March 2011

Proteomic analysis of seed filling in Brassica napus. Developmental characterization of metabolic isozymes using high-resolution two-dimensional gel electrophoresis

scientific article published on 16 March 2006

Proteomic characterization of a triton-insoluble fraction from chloroplasts defines a novel group of proteins associated with macromolecular structures

scientific article published on March 2005

Proteomics tools and resources for investigating protein allergens in oilseeds

scientific article published on 24 January 2009

Purification and proteomic characterization of plastids from Brassica napus developing embryos

scientific article published in August 2008

Purification of protein complexes and characterization of protein-protein interactions

scientific article published on January 2014

Purification, Characterization, and Submitochondrial Localization of a 58-Kilodalton NAD(P)H Dehydrogenase

scientific article published on 01 February 1995

Purification, Characterization, and Submitochondrial Localization of the 32-Kilodalton NADH Dehydrogenase from Maize

scientific article published on 01 November 1994

Pyruvate dehydrogenase kinase from Arabidopsis thaliana: a protein histidine kinase that phosphorylates serine residues

scientific article published on July 2000

P³DB 3.0: From plant phosphorylation sites to protein networks

scientific article

Quantitation of Soybean Allergens Using Tandem Mass Spectrometry

scientific article published on 08 December 2010

Quantitative proteomics in plants: choices in abundance

scientific article published on 30 November 2007

Quantitative proteomics of seed filling in castor: comparison with soybean and rapeseed reveals differences between photosynthetic and nonphotosynthetic seed metabolism

scientific article published on 12 August 2009

Reduction of IgE binding and nonpromotion of Aspergillus flavus fungal growth by simultaneously silencing Ara h 2 and Ara h 6 in peanut

scientific article published in December 2008

Regulation and structure of the heteromeric acetyl-CoA carboxylase

scientific article published on 15 April 2016

Regulation of the Regulators: Post-Translational Modifications, Subcellular, and Spatiotemporal Distribution of Plant 14-3-3 Proteins

scientific article

S-acylation of P2K1 mediates extracellular ATP-induced immune signaling in Arabidopsis

scientific article published on 12 May 2021

Spontaneous and induced variability of allergens in commodity crops: Ara h 2 in peanut as a case study

scientific article published on 20 November 2008

Sunflower HaGPAT9-1 is the predominant GPAT during seed development

scientific article published on 9 July 2016

System analysis of an Arabidopsis mutant altered in de novo fatty acid synthesis reveals diverse changes in seed composition and metabolism

scientific article published on 11 March 2009

Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression

scientific article published on 29 January 2010

The 14-3-3 isoforms chi and epsilon differentially bind client proteins from developing Arabidopsis seed

scientific article published on 3 August 2011

The Absence of Heat Shock Protein HSP101 Affects the Proteome of Mature and Germinating Maize Embryos

scientific article published on 11 May 2012

The Raf-like Kinase ILK1 and the High Affinity K+ Transporter HAK5 Are Required for Innate Immunity and Abiotic Stress Response.

scientific article

The Raf-like MAPKKK INTEGRIN-LINKED KINASE 5 regulates purinergic receptor-mediated innate immunity in Arabidopsis

scientific article published on 10 February 2023

The dihydrolipoamide S-acetyltransferase subunit of the mitochondrial pyruvate dehydrogenase complex from maize contains a single lipoyl domain.

scientific article published in July 1999

The essential role of plastidial triose phosphate isomerase in the integration of seed reserve mobilization and seedling establishment

scientific article published on 20 April 2010

The identification of a sequence related to apicomplexan enolase from Sarcocystis neurona.

scientific article

The multisubunit acetyl-CoA carboxylase is strongly associated with the chloroplast envelope through non-ionic interactions to the carboxyltransferase subunits

article

The plastid isoform of triose phosphate isomerase is required for the postgerminative transition from heterotrophic to autotrophic growth in Arabidopsis

scientific article published on 22 January 2010

The potato tuber mitochondrial proteome

scientific article published on 18 December 2013

The proteome of higher plant mitochondria.

scientific article published on 9 July 2016

The proteomic future: where mass spectrometry should be taking us.

scientific article published on June 2012

The response of Asterochloris erici (Ahmadjian) Skaloud et Peksa to desiccation: a proteomic approach.

scientific article published on 4 February 2013

Two SERK Receptor-Like Kinases Interact with EMS1 to Control Anther Cell Fate Determination.

scientific article published on 5 December 2016

Validation of gel-free, label-free quantitative proteomics approaches: Applications for seed allergen profiling

scientific article published on 18 November 2008

ZMPP2, a novel type-2C protein phosphatase from maize

scientific article published on August 2001

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