List of works - Andrea Bräutigam

A plastidial sodium-dependent pyruvate transporter.

scientific article published on 24 August 2011

Adaptation of maize source leaf metabolism to stress related disturbances in carbon, nitrogen and phosphorus balance

scientific article

An mRNA blueprint for C4 photosynthesis derived from comparative transcriptomics of closely related C3 and C4 species

article

Azolla domestication towards a biobased economy?

scientific article published on 4 February 2014

Comparative Proteomics of Chloroplasts Envelopes from Bundle Sheath and Mesophyll Chloroplasts Reveals Novel Membrane Proteins with a Possible Role in C4-Related Metabolite Fluxes and Development ⬇️

scientific article published on March 28, 2013

Comparative proteomics of chloroplast envelopes from C3 and C4 plants reveals specific adaptations of the plastid envelope to C4 photosynthesis and candidate proteins required for maintaining C4 metabolite fluxes.

scientific article published on 3 July 2008

Comparative transcriptome atlases reveal altered gene expression modules between two Cleomaceae C3 and C4 plant species.

scientific article published on 8 August 2014

Comprehensive transcriptome analysis of the highly complex Pisum sativum genome using next generation sequencing

scientific article

Corrigendum: Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data.

scientific article published in June 2018

Critical assessment of assembly strategies for non-model species mRNA-Seq data and application of next-generation sequencing to the comparison of C(3) and C(4) species.

scientific article

Cytokinin-induced promotion of root meristem size in the fern Azolla supports a shoot-like origin of euphyllophyte roots

scientific article

Deficiency in the Phosphorylated Pathway of Serine Biosynthesis Perturbs Sulfur Assimilation

scientific article published on 20 February 2019

Do Metabolite Transport Processes Limit Photosynthesis? ⬇️

scientific article published on September 20, 2010

Dynamic Remodeling of the Plastid Envelope Membranes - A Tool for Chloroplast Envelope in vivo Localizations

scientific article published on 23 January 2012

EST-analysis of the thermo-acidophilic red microalga Galdieria sulphuraria reveals potential for lipid A biosynthesis and unveils the pathway of carbon export from rhodoplasts.

scientific article published in May 2004

Ecology and Evolution of Intraspecific Chemodiversity of Plants

Evolution of C4 photosynthesis in the genus Flaveria: how many and which genes does it take to make C4?

scientific article published on 24 June 2011

Fern genomes elucidate land plant evolution and cyanobacterial symbioses

article

Flavin Monooxygenase-Generated N-Hydroxypipecolic Acid Is a Critical Element of Plant Systemic Immunity

scientific article published on 22 March 2018

Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data.

scientific article

Functional evolution of nodulin 26-like intrinsic proteins: from bacterial arsenic detoxification to plant nutrient transport

scientific article published on 2 November 2019

Gene Transfer from Bacteria and Archaea Facilitated Evolution of an Extremophilic Eukaryote

scientific article

High-throughput colorimetric method for the parallel assay of glyoxylic acid and ammonium in a single extract

scientific article published on 22 December 2006

How does plant chemodiversity evolve? Testing five hypotheses in one population genetic model

scientific article published on 5 September 2024

How does plant chemodiversity evolve? Testing five hypotheses in one population genetic model

scientific article published on 15 April 2024

Impact of SO(2) on Arabidopsis thaliana transcriptome in wildtype and sulfite oxidase knockout plants analyzed by RNA deep sequencing

scientific article published in October 2012

Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N2 but may denitrify.

scientific article published on 30 October 2017

Leaf primordium size specifies leaf width and vein number among row-type classes in barley.

scientific article

Local DNA shape is a general principle of transcription factor binding specificity in Arabidopsis thaliana

scientific article published on 12 November 2021

Low-coverage massively parallel pyrosequencing of cDNAs enables proteomics in non-model species: comparison of a species-specific database generated by pyrosequencing with databases from related species for proteome analysis of pea chloroplast envel

scientific article

Maize source leaf adaptation to nitrogen deficiency affects not only nitrogen and carbon metabolism but also control of phosphate homeostasis

scientific article published on 12 September 2012

Metabolic Adaptation, a Specialized Leaf Organ Structure and Vascular Responses to Diurnal N2 Fixation by Nostoc azollae Sustain the Astonishing Productivity of Azolla Ferns without Nitrogen Fertilizer

scientific article published on 31 March 2017

Molecular plant responses to combined abiotic stresses put a spotlight on unknown and abundant genes

scientific article published on 22 May 2020

Most photorespiratory genes are preferentially expressed in the bundle sheath cells of the C4 grass Sorghum bicolor.

scientific article published on 14 March 2016

OPTIMAS-DW: a comprehensive transcriptomics, metabolomics, ionomics, proteomics and phenomics data resource for maize

scientific article (publication date: 29 December 2012)

On the Evolutionary Origin of CAM Photosynthesis.

scientific article published on 17 April 2017

PLGG1, a plastidic glycolate glycerate transporter, is required for photorespiration and defines a unique class of metabolite transporters

scientific article published on 4 February 2013

Photorespiration Is Crucial for Dynamic Response of Photosynthetic Metabolism and Stomatal Movement to Altered CO2 Availability

scientific article

Photorespiration connects C3 and C4 photosynthesis

scientific article published on 22 February 2016

Photosynthesis in C3-C4 intermediate Moricandia species

scientific article published on 19 October 2016

Pipecolic Acid Orchestrates Plant Systemic Acquired Resistance and Defense Priming via Salicylic Acid-Dependent and -Independent Pathways.

scientific article

Plastid signals and the bundle sheath: mesophyll development in reticulate mutants.

scientific article

Proteomic analysis of the proplastid envelope membrane provides novel insights into small molecule and protein transport across proplastid membranes.

scientific article

Quantitative transcriptome analysis using RNA-seq

scientific article published in January 2014

RNA-Seq Assembly - Are We There Yet?

scientific article published on 25 September 2012

Reactive oxygen species and redox regulation in mesophyll and bundle sheath cells of C4 plants

scientific article published on 01 June 2018

Reversible Burst of Transcriptional Changes during Induction of Crassulacean Acid Metabolism in Talinum triangulare.

scientific article

Shared origins of a key enzyme during the evolution of C4 and CAM metabolism

scientific article

Systems analysis of a maize leaf developmental gradient redefines the current C4 model and provides candidates for regulation.

scientific article published on 20 December 2011

Systems analysis of cis-regulatory motifs in C4 photosynthesis genes using maize and rice leaf transcriptomic data during a process of de-etiolation.

scientific article

The BEACH Domain Protein SPIRRIG Is Essential for Arabidopsis Salt Stress Tolerance and Functions as a Regulator of Transcript Stabilization and Localization

scientific article

The Gynandropsis gynandra genome provides insights into whole-genome duplications and the evolution of C4 photosynthesis in Cleomaceae ⬇️

scientific article published on 24 January 2023

The Influence of a Cryptochrome on the Gene Expression Profile in the Diatom Phaeodactylum tricornutum under Blue Light and in Darkness

scientific article published on 30 August 2017

The Plastid Outer Envelope - A Highly Dynamic Interface between Plastid and Cytoplasm

scientific article

The Tarenaya hassleriana genome provides insight into reproductive trait and genome evolution of crucifers.

scientific article

The cis-acting CTTC-P1BS module is indicative for gene function of LjVTI12, a Qb-SNARE protein gene that is required for arbuscule formation in Lotus japonicus

scientific article published on 16 March 2013

The dicotyledonous NAD malic enzyme C4 plant Cleome gynandra displays age-dependent plasticity of C4 decarboxylation biochemistry

scientific article published on 30 January 2012

The leaf reticulate mutant dov1 is impaired in the first step of purine metabolism

scientific article published on 24 April 2012

The protein composition of the digestive fluid from the venus flytrap sheds light on prey digestion mechanisms

scientific article

The role of alanine and aspartate aminotransferases in C4 photosynthesis

scientific article published on 24 September 2018

The role of membrane transport in metabolic engineering of plant primary metabolism

scientific article published on 04 October 2012

The role of photorespiration during the evolution of C4 photosynthesis in the genus Flaveria.

scientific article

The transcriptional landscape of polyploid wheat

scientific article

Three distinct biochemical subtypes of C4 photosynthesis? A modelling analysis

scientific article

Towards an integrative model of C4 photosynthetic subtypes: insights from comparative transcriptome analysis of NAD-ME, NADP-ME, and PEP-CK C4 species

scientific article

Transcriptional response of the extremophile red alga Cyanidioschyzon merolae to changes in CO2 concentrations.

scientific article published on 04 July 2017

Understanding metabolite transport and metabolism in C4 plants through RNA-seq

scientific article published on 12 April 2016

What can next generation sequencing do for you? Next generation sequencing as a valuable tool in plant research.

scientific article

List of works by Andrea Bräutigam

A plastidial sodium-dependent pyruvate transporter.

Adaptation of maize source leaf metabolism to stress related disturbances in carbon, nitrogen and phosphorus balance

An mRNA blueprint for C4 photosynthesis derived from comparative transcriptomics of closely related C3 and C4 species

Azolla domestication towards a biobased economy?

Comparative Proteomics of Chloroplasts Envelopes from Bundle Sheath and Mesophyll Chloroplasts Reveals Novel Membrane Proteins with a Possible Role in C4-Related Metabolite Fluxes and Development ⬇️

Comparative proteomics of chloroplast envelopes from C3 and C4 plants reveals specific adaptations of the plastid envelope to C4 photosynthesis and candidate proteins required for maintaining C4 metabolite fluxes.

Comparative transcriptome atlases reveal altered gene expression modules between two Cleomaceae C3 and C4 plant species.

Comprehensive transcriptome analysis of the highly complex Pisum sativum genome using next generation sequencing

Corrigendum: Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data.

Critical assessment of assembly strategies for non-model species mRNA-Seq data and application of next-generation sequencing to the comparison of C(3) and C(4) species.

Cytokinin-induced promotion of root meristem size in the fern Azolla supports a shoot-like origin of euphyllophyte roots

Deficiency in the Phosphorylated Pathway of Serine Biosynthesis Perturbs Sulfur Assimilation

Do Metabolite Transport Processes Limit Photosynthesis? ⬇️

Dynamic Remodeling of the Plastid Envelope Membranes - A Tool for Chloroplast Envelope in vivo Localizations

EST-analysis of the thermo-acidophilic red microalga Galdieria sulphuraria reveals potential for lipid A biosynthesis and unveils the pathway of carbon export from rhodoplasts.

Ecology and Evolution of Intraspecific Chemodiversity of Plants

Evolution of C4 photosynthesis in the genus Flaveria: how many and which genes does it take to make C4?

Fern genomes elucidate land plant evolution and cyanobacterial symbioses

Flavin Monooxygenase-Generated N-Hydroxypipecolic Acid Is a Critical Element of Plant Systemic Immunity

Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data.

Functional evolution of nodulin 26-like intrinsic proteins: from bacterial arsenic detoxification to plant nutrient transport

Gene Transfer from Bacteria and Archaea Facilitated Evolution of an Extremophilic Eukaryote

High-throughput colorimetric method for the parallel assay of glyoxylic acid and ammonium in a single extract

How does plant chemodiversity evolve? Testing five hypotheses in one population genetic model

How does plant chemodiversity evolve? Testing five hypotheses in one population genetic model

Impact of SO(2) on Arabidopsis thaliana transcriptome in wildtype and sulfite oxidase knockout plants analyzed by RNA deep sequencing

Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N2 but may denitrify.

Leaf primordium size specifies leaf width and vein number among row-type classes in barley.

Local DNA shape is a general principle of transcription factor binding specificity in Arabidopsis thaliana

Low-coverage massively parallel pyrosequencing of cDNAs enables proteomics in non-model species: comparison of a species-specific database generated by pyrosequencing with databases from related species for proteome analysis of pea chloroplast envel

Maize source leaf adaptation to nitrogen deficiency affects not only nitrogen and carbon metabolism but also control of phosphate homeostasis

Metabolic Adaptation, a Specialized Leaf Organ Structure and Vascular Responses to Diurnal N2 Fixation by Nostoc azollae Sustain the Astonishing Productivity of Azolla Ferns without Nitrogen Fertilizer

Molecular plant responses to combined abiotic stresses put a spotlight on unknown and abundant genes

Most photorespiratory genes are preferentially expressed in the bundle sheath cells of the C4 grass Sorghum bicolor.

OPTIMAS-DW: a comprehensive transcriptomics, metabolomics, ionomics, proteomics and phenomics data resource for maize

On the Evolutionary Origin of CAM Photosynthesis.

PLGG1, a plastidic glycolate glycerate transporter, is required for photorespiration and defines a unique class of metabolite transporters

Photorespiration Is Crucial for Dynamic Response of Photosynthetic Metabolism and Stomatal Movement to Altered CO2 Availability

Photorespiration connects C3 and C4 photosynthesis

Photosynthesis in C3-C4 intermediate Moricandia species

Pipecolic Acid Orchestrates Plant Systemic Acquired Resistance and Defense Priming via Salicylic Acid-Dependent and -Independent Pathways.

Plastid signals and the bundle sheath: mesophyll development in reticulate mutants.

Proteomic analysis of the proplastid envelope membrane provides novel insights into small molecule and protein transport across proplastid membranes.

Quantitative transcriptome analysis using RNA-seq

RNA-Seq Assembly - Are We There Yet?

Reactive oxygen species and redox regulation in mesophyll and bundle sheath cells of C4 plants

Reversible Burst of Transcriptional Changes during Induction of Crassulacean Acid Metabolism in Talinum triangulare.

Shared origins of a key enzyme during the evolution of C4 and CAM metabolism

Systems analysis of a maize leaf developmental gradient redefines the current C4 model and provides candidates for regulation.

Systems analysis of cis-regulatory motifs in C4 photosynthesis genes using maize and rice leaf transcriptomic data during a process of de-etiolation.

The BEACH Domain Protein SPIRRIG Is Essential for Arabidopsis Salt Stress Tolerance and Functions as a Regulator of Transcript Stabilization and Localization

The Gynandropsis gynandra genome provides insights into whole-genome duplications and the evolution of C4 photosynthesis in Cleomaceae ⬇️

The Influence of a Cryptochrome on the Gene Expression Profile in the Diatom Phaeodactylum tricornutum under Blue Light and in Darkness

The Plastid Outer Envelope - A Highly Dynamic Interface between Plastid and Cytoplasm

The Tarenaya hassleriana genome provides insight into reproductive trait and genome evolution of crucifers.

The cis-acting CTTC-P1BS module is indicative for gene function of LjVTI12, a Qb-SNARE protein gene that is required for arbuscule formation in Lotus japonicus

The dicotyledonous NAD malic enzyme C4 plant Cleome gynandra displays age-dependent plasticity of C4 decarboxylation biochemistry

The leaf reticulate mutant dov1 is impaired in the first step of purine metabolism

The protein composition of the digestive fluid from the venus flytrap sheds light on prey digestion mechanisms

The role of alanine and aspartate aminotransferases in C4 photosynthesis

The role of membrane transport in metabolic engineering of plant primary metabolism

The role of photorespiration during the evolution of C4 photosynthesis in the genus Flaveria.

The transcriptional landscape of polyploid wheat

Three distinct biochemical subtypes of C4 photosynthesis? A modelling analysis

Towards an integrative model of C4 photosynthetic subtypes: insights from comparative transcriptome analysis of NAD-ME, NADP-ME, and PEP-CK C4 species

Transcriptional response of the extremophile red alga Cyanidioschyzon merolae to changes in CO2 concentrations.

Understanding metabolite transport and metabolism in C4 plants through RNA-seq

What can next generation sequencing do for you? Next generation sequencing as a valuable tool in plant research.