List of works by Venkata P Satagopam

A draft network of ligand-receptor-mediated multicellular signalling in human

scientific article published on 22 July 2015

Arena3D: visualization of biological networks in 3D.

scientific article

BioKB – Text mining and semantic technologies for the biomedical content discovery ⬇️

BioTextQuest(+): a knowledge integration platform for literature mining and concept discovery.

scientific article published on 6 August 2014

BioTextQuest+: a knowledge integration platform for literature mining and concept discovery

scientific article published on 11 February 2015

Caipirini: using gene sets to rank literature.

scientific article published on February 2012

Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence

scientific article

Combined lipidomic and proteomic analysis of isolated human islets exposed to palmitate reveals time-dependent changes in insulin secretion and lipid metabolism

scientific article

Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks

scientific article

Confronting the catalytic dark matter encoded by sequenced genomes.

scientific article published on 20 October 2017

Constitutive activation of oncogenic PDGFRα-mutant proteins occurring in GIST patients induces receptor mislocalisation and alters PDGFRα signalling characteristics.

scientific article

Corrigendum: A draft network of ligand-receptor-mediated multicellular signalling in human

scientific article published on 10 February 2016

Defective lamin A-Rb signaling in Hutchinson-Gilford Progeria Syndrome and reversal by farnesyltransferase inhibition

scientific article

Don't Wear Your New Shoes (Yet): Taking the Right Steps to Become a Successful Principal Investigator.

scientific article published on 31 January 2013

Fractalis: a scalable open-source service for platform-independent interactive visual analysis of biomedical data

scientific article published on 01 September 2018

GPCRs, G-proteins, effectors and their interactions: human-gpDB, a database employing visualization tools and data integration techniques

scientific article

Genome-wide identification and functional analyses of microRNA signatures associated with cancer pain

scientific article published on 18 October 2013

GigaSOM.jl: High-performance clustering and visualization of huge cytometry datasets

scientific article published on 01 November 2020

Integrating pathways of Parkinson's disease in a molecular interaction map.

scientific article published on 07 July 2013

Integration and Visualization of Translational Medicine Data for Better Understanding of Human Diseases

scientific article

MINERVA-a platform for visualization and curation of molecular interaction networks

scientific article published on 22 September 2016

Nuclear calcium signaling in spinal neurons drives a genomic program required for persistent inflammatory pain

scientific article

Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes

scientific article

PredictProtein - Predicting Protein Structure and Function for 29 Years

scientific article published on 11 May 2021

Presenting and sharing clinical data using the eTRIKS Standards Master Tree for tranSMART

Signaling in Insulin-Secreting MIN6 Pseudoislets and Monolayer Cells

scientific article published on 30 September 2013

SmartR: An open-source platform for interactive visual analytics for translational research data

scientific article

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

scientific article (publication date: 11 February 2013)

The HIV mutation browser: a resource for human immunodeficiency virus mutagenesis and polymorphism data

scientific article (publication date: December 2014)

The ISCB Student Council Internship Program: Expanding computational biology capacity worldwide.

scientific article published on 18 January 2018

The Luxembourg Parkinson's Study: A Comprehensive Approach for Stratification and Early Diagnosis

scholarly article by Geraldine Hipp et al published 2018 in Frontiers in Aging Neuroscience

The future of metabolomics in ELIXIR

scientific article published in 2017

The future of metabolomics in ELIXIR.

scientific article

The oncogenic FIP1L1-PDGFRα fusion protein displays skewed signaling properties compared to its wild-type PDGFRα counterpart.

scientific article published on 17 July 2015

The young PI buzz: learning from the organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013.

scientific article published on 7 November 2013

Transcriptional mechanisms underlying sensitization of peripheral sensory neurons by granulocyte-/granulocyte-macrophage colony stimulating factors

scientific article published on 25 September 2013

siRNA screen identifies QPCT as a druggable target for Huntington's disease

scientific article

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