List of works by Wout Boerjan

A Key Role for Apoplastic H2O2 in Norway Spruce Phenolic Metabolism.

scientific article published on 18 May 2017

A click chemistry strategy for visualization of plant cell wall lignification.

scientific article published in October 2014

A high-performance liquid chromatography radio method for determination of L-ascorbic acid and guanosine 5'-diphosphate-l-galactose, key metabolites of the plant vitamin C pathway

scientific article published in July 2001

A molecular timetable for apical bud formation and dormancy induction in poplar.

scientific article

A new bioassay for auxins and cytokinins

scientific article published in July 1992

A novel seed protein gene from Vicia faba is developmentally regulated in transgenic tobacco and Arabidopsis plants

scientific article published in March 1991

A systems biology view of responses to lignin biosynthesis perturbations in Arabidopsis

scientific article published on 25 September 2012

ABI3 affects plastid differentiation in dark-grown Arabidopsis seedlings

scientific article published in January 2000

ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 1 (ADPG1) releases latent defense signals in stems with reduced lignin content

scientific article published on 23 January 2020

Accumulation of N-acetylglucosamine oligomers in the plant cell wall affects plant architecture in a dose-dependent and conditional manner

scientific article published on 24 March 2014

Alterations in the phenylpropanoid pathway affect poplar ability for ectomycorrhizal colonisation and susceptibility to root-knot nematodes

scientific article published on 09 July 2020

Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements

scientific article published on 14 April 2004

Arabidopsis WAT1 is a vacuolar auxin transport facilitator required for auxin homoeostasis.

scientific article published on January 2013

Bioactivity: phenylpropanoids' best kept secret

scientific article published on 11 December 2018

Bioethanol from poplar: a commercially viable alternative to fossil fuel in the European Union

scientific article

Biotechnology and the domestication of forest trees.

scientific article

Breeding with rare defective alleles (BRDA): a natural Populus nigra HCT mutant with modified lignin as a case study

scientific article published on 25 February 2013

Bud set in poplar--genetic dissection of a complex trait in natural and hybrid populations.

scientific article published on 6 October 2010

COSY catalyses trans-cis isomerization and lactonization in the biosynthesis of coumarins

scientific article published on 09 September 2019

Caffeoyl shikimate esterase (CSE) is an enzyme in the lignin biosynthetic pathway in Arabidopsis ⬇️

scientific article published on 15 August 2013

Carbon isotope compositions (δ(13) C) of leaf, wood and holocellulose differ among genotypes of poplar and between previous land uses in a short-rotation biomass plantation.

scientific article published on 12 July 2014

Carpel, a new Arabidopsis epi-mutant of the SUPERMAN gene: phenotypic analysis and DNA methylation status.

scientific article published in September 1999

Cell-specific and conditional expression of caffeoyl-coenzyme A-3-O-methyltransferase in poplar

scientific article published in July 2000

Characterization of cis-elements required for vascular expression of the cinnamoyl CoA reductase gene and for protein-DNA complex formation.

scientific article published in September 2000

Characterization of the UDP-glycosyltransferase UGT72 Family in Poplar and Identification of Genes Involved in the Glycosylation of Monolignols

scientific article published on 16 July 2020

Chemical Genetics Uncovers Novel Inhibitors of Lignification, Including p-Iodobenzoic Acid Targeting CINNAMATE-4-HYDROXYLASE

scientific article

Clade classification of monolignol biosynthesis gene family members reveals target genes to decrease lignin in Lolium perenne

scientific article published on 13 March 2015

Constitutive overexpression of cystathionine gamma-synthase in Arabidopsis leads to accumulation of soluble methionine and S-methylmethionine

scientific article

Different Routes for Conifer- and Sinapaldehyde and Higher Saccharification upon Deficiency in the Dehydrogenase CAD1.

scientific article published on 6 September 2017

Different expression of an S-adenosylmethionine synthetase gene in transgenic tobacco callus modifies alkaloid biosynthesis

scientific article published on 01 July 2000

Downregulation of cinnamoyl-coenzyme A reductase in poplar: multiple-level phenotyping reveals effects on cell wall polymer metabolism and structure

scientific article published on 16 November 2007

Ectopic lignification in the flax lignified bast fiber1 mutant stem is associated with tissue-specific modifications in gene expression and cell wall composition.

scientific article published on 7 November 2014

Elucidating Tricin-Lignin Structures: Assigning Correlations in HSQC Spectra of Monocot Lignins

scientific article published on 15 August 2018

Elucidation of new structures in lignins of CAD- and COMT-deficient plants by NMR.

scientific article published in July 2001

Engineering traditional monolignols out of lignin by concomitant up-regulation of F5H1 and down-regulation of COMT in Arabidopsis.

scientific article published on 15 October 2010

Environmental impact assessment and monitoring of genetically modified trees

scientific article

Evolution of plant defense mechanisms. Relationships of phenylcoumaran benzylic ether reductases to pinoresinol-lariciresinol and isoflavone reductases

scientific article published in March 1999

Ex-situ conservation of Black poplar in Europe: genetic diversity in nine gene bank collections and their value for nature development.

scientific article

Expression of SofLAC, a new laccase in sugarcane, restores lignin content but not S:G ratio of Arabidopsis lac17 mutant

scientific article

Field and pulping performances of transgenic trees with altered lignification

scientific article published in June 2002

Forest biotechnology makes its position known

scientific article published on 01 December 1999

Gene discovery in the wood-forming tissues of poplar: analysis of 5, 692 expressed sequence tags.

scientific article

Gene expression during the induction, maintenance, and release of dormancy in apical buds of poplar.

scientific article

Genetical metabolomics of flavonoid biosynthesis in Populus: a case study.

scientific article published on 15 June 2006

Genetically modified lignin below ground.

scientific article published in February 2007

Genome-wide characterization of the lignification toolbox in Arabidopsis

scientific article published in November 2003

Genome-wide identification of NBS resistance genes in Populus trichocarpa

scientific article

Genomic nucleotide sequence of an Arabidopsis thaliana gene encoding a cinnamyl alcohol dehydrogenase

scientific article published in January 1995

Identification of AFLP molecular markers for resistance against Melampsora larici-populina in Populus.

scientific article published on October 1996

Identification of the structure and origin of a thioacidolysis marker compound for ferulic acid incorporation into angiosperm lignins (and an indicator for cinnamoyl CoA reductase deficiency).

scientific article

Impact of the absence of stem-specific β-glucosidases on lignin and monolignols

scientific article published on 14 September 2012

Improved saccharification and ethanol yield from field-grown transgenic poplar deficient in cinnamoyl-CoA reductase

scientific article (publication date: 14 January 2014)

Integrative genetical genomics in Arabidopsis

scientific article published on 01 February 2009

Intraspecific and interspecific genetic and phylogenetic relationships in the genus Populus based on AFLP markers.

scientific article

Introducing curcumin biosynthesis in Arabidopsis enhances lignocellulosic biomass processing

scientific article published on 28 January 2019

Introduction of chemically labile substructures into Arabidopsis lignin through the use of LigD, the Cα-dehydrogenase from Sphingobium sp. strain SYK-6.

scientific article published on 8 January 2015

Joint GC-MS and LC-MS platforms for comprehensive plant metabolomics: repeatability and sample pre-treatment

scientific article published in September 2009

Large-scale detection of rare variants via pooled multiplexed next-generation sequencing: towards next-generation Ecotilling

scientific article published on 11 July 2011

Lignification in sugarcane: biochemical characterization, gene discovery, and expression analysis in two genotypes contrasting for lignin content.

scientific article published on 21 October 2013

Lignin biosynthesis

scientific article (publication date: 2003)

Lignin: Genetic Engineering and Impact on Pulping ⬇️

scientific article published on January 1, 2003

MYB103 is required for FERULATE-5-HYDROXYLASE expression and syringyl lignin biosynthesis in Arabidopsis stems.

scientific article published on 19 October 2012

Maize Tricin-Oligolignol Metabolites and Their Implications for Monocot Lignification.

scientific article published in April 2016

Mapping methyl jasmonate-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cells

scholarly article

Mass spectrometry-based fragmentation as an identification tool in lignomics

scientific article

Mass spectrometry-based sequencing of lignin oligomers

scientific article published on 16 June 2010

Metabolic engineering of novel lignin in biomass crops

scientific article published on 04 October 2012

Metabolite profiling reveals a role for atypical cinnamyl alcohol dehydrogenase CAD1 in the synthesis of coniferyl alcohol in tobacco xylem

scientific article published in November 2005

Modeling lignin polymerization. I. Simulation model of dehydrogenation polymers.

scientific article published on 14 May 2010

Modifications in lignin and accumulation of phenolic glucosides in poplar xylem upon down-regulation of caffeoyl-coenzyme A O-methyltransferase, an enzyme involved in lignin biosynthesis

scientific article published in November 2000

Molecular Changes Concomitant with Vascular System Development in Mature Galls Induced by Root-Knot Nematodes in the Model Tree Host Populus tremula × P. alba

scientific article published on 09 January 2020

Molecular changes associated with the setting up of secondary growth in aspen.

scientific article published on 4 July 2005

Molecular genetic approaches to plant development

scientific article published on March 1, 1992

Molecular phenotyping of lignin-modified tobacco reveals associated changes in cell-wall metabolism, primary metabolism, stress metabolism and photorespiration

scientific article published on 28 August 2007

Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism ⬇️

scientific article published on 17 September 2004

Mutation of the inducible ARABIDOPSIS THALIANA CYTOCHROME P450 REDUCTASE2 alters lignin composition and improves saccharification.

scientific article published on 14 October 2014

NMR evidence for benzodioxane structures resulting from incorporation of 5-hydroxyconiferyl alcohol into Lignins of O-methyltransferase-deficient poplars

scientific article published in January 2001

Natural hypolignification is associated with extensive oligolignol accumulation in flax stems

scientific article published on 13 February 2012

PIRIN2 suppresses S-type lignin accumulation in a noncell-autonomous manner in Arabidopsis xylem elements

scientific article published on 11 November 2019

Partial purification and identification of GDP-mannose 3",5"-epimerase of Arabidopsis thaliana, a key enzyme of the plant vitamin C pathway

scientific article

Perturbation of indole-3-butyric acid homeostasis by the UDP-glucosyltransferase UGT74E2 modulates Arabidopsis architecture and water stress tolerance

scientific article published on 26 August 2010

Phenolic profiling of caffeic acid O-methyltransferase-deficient poplar reveals novel benzodioxane oligolignols

scientific article published on 24 November 2004

Phenylcoumaran benzylic ether reductase prevents accumulation of compounds formed under oxidative conditions in poplar xylem

scientific article published on 19 September 2014

Phenylcoumaran benzylic ether reductase, a prominent poplar xylem protein, is strongly associated with phenylpropanoid biosynthesis in lignifying cells.

scientific article published in September 2000

Plant cell wall profiling by fast maximum likelihood reconstruction (FMLR) and region-of-interest (ROI) segmentation of solution-state 2D 1H-13C NMR spectra.

scientific article published on 26 April 2013

Polyploidy affects plant growth and alters cell wall composition

article

Potential of Arabidopsis systems biology to advance the biofuel field ⬇️

scientific article published on August 26, 2010

Preparation and relevance of a cross-coupling product between sinapyl alcohol and sinapyl p-hydroxybenzoate

scientific article published on 28 September 2004

Profiling of oligolignols reveals monolignol coupling conditions in lignifying poplar xylem

scientific article published on 29 October 2004

Protein-protein and protein-membrane associations in the lignin pathway

scientific article published on 21 November 2012

PtABI3 impinges on the growth and differentiation of embryonic leaves during bud set in poplar.

scientific article

PtaRHE1, a Populus tremula × Populus alba RING-H2 protein of the ATL family, has a regulatory role in secondary phloem fibre development.

scientific article published on 25 April 2015

Purification and characterization of peroxidases correlated with lignification in poplar xylem

scientific article published in September 1998

Quantitative trait loci and candidate gene mapping of bud set and bud flush in populus.

scientific article

Red Xylem and Higher Lignin Extractability by Down-Regulating a Cinnamyl Alcohol Dehydrogenase in Poplar

scientific article published in December 1996

Retromer subunits VPS35A and VPS29 mediate prevacuolar compartment (PVC) function in Arabidopsis

scientific article published on 14 June 2013

Rewired phenolic metabolism and improved saccharification efficiency of a Zea mays cinnamyl alcohol dehydrogenase 2 (zmcad2) mutant

scientific article published on 01 December 2020

Science, society and biosafety of a field trial with transgenic biofuel poplars.

scientific article

Sequencing around 5-hydroxyconiferyl alcohol-derived units in caffeic acid O-methyltransferase-deficient poplar lignins

scientific article published on 28 April 2010

Significant influence of lignin on axial elastic modulus of poplar wood at low microfibril angles under wet conditions

scientific article published on 01 August 2019

Silencing CAFFEOYL SHIKIMATE ESTERASE Affects Lignification and Improves Saccharification in Poplar.

scientific article

Silencing CHALCONE SYNTHASE in Maize Impedes the Incorporation of Tricin into Lignin and Increases Lignin Content.

scientific article

Small glycosylated lignin oligomers are stored in Arabidopsis leaf vacuoles

scientific article published on 19 February 2015

Stacking of a low-lignin trait with an increased guaiacyl and 5-hydroxyguaiacyl unit trait leads to additive and synergistic effects on saccharification efficiency in

scientific article published on 20 September 2018

Strangled at birth? Forest biotech and the Convention on Biological Diversity

scientific article

Strong cellular preference in the expression of a housekeeping gene of Arabidopsis thaliana encoding S-adenosylmethionine synthetase

scientific article published on January 1989

Structural alterations of lignins in transgenic poplars with depressed cinnamyl alcohol dehydrogenase or caffeic acid O-methyltransferase activity have an opposite impact on the efficiency of industrial kraft pulping

scientific article

Structure of the genetic diversity in black poplar (Populus nigra L.) populations across European river systems: Consequences for conservation and restoration

scientific article published in 2008

Superroot, a recessive mutation in Arabidopsis, confers auxin overproduction.

scientific article published in September 1995

Suppression of CCR impacts metabolite profile and cell wall composition in Pinus radiata tracheary elements

scientific article published on 7 November 2012

Syringyl lignin is unaltered by severe sinapyl alcohol dehydrogenase suppression in tobacco.

scientific article published on 9 December 2011

Systematic structural characterization of metabolites in Arabidopsis via candidate substrate-product pair networks

scientific article published on 31 March 2014

Tailoring poplar lignin without yield penalty by combining a null and haploinsufficient CINNAMOYL-CoA REDUCTASE2 allele

scientific article published on 06 October 2020

Temperature signals contribute to the timing of photoperiodic growth cessation and bud set in poplar

scientific article

The 20-year environmental safety record of GM trees.

scientific article

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

scientific article

The allelochemical MDCA inhibits lignification and affects auxin homeostasis

scientific article published on 9 August 2016

The effect of altered lignin composition on mechanical properties of CINNAMYL ALCOHOL DEHYDROGENASE (CAD) deficient poplars

scientific article published on 21 December 2017

The role of the secondary cell wall in plant resistance to pathogens

scientific article

The syringaldazine-oxidizing peroxidase PXP 3-4 from poplar xylem: cDNA isolation, characterization and expression

scientific article published in November 2001

Tissue-specific expression conferred by the S-adenosyl-L-methionine synthetase promoter of Arabidopsis thaliana in transgenic poplar

scientific article published in December 1996

Towards a carbon-negative sustainable bio-based economy

scientific article

Transcript and metabolite profiling for the evaluation of tobacco tree and poplar as feedstock for the bio-based industry

scientific article

Transcription factor WRKY23 assists auxin distribution patterns during Arabidopsis root development through local control on flavonol biosynthesis

scientific article published on 17 January 2012

Transgenic Arabidopsis tester lines with dominant marker genes

scientific article published in June 1996

Tricin, a flavonoid monomer in monocot lignification

scientific article

Two chemically distinct root lignin barriers control solute and water balance

scientific article published on 19 April 2021

Unravelling the impact of lignin on cell wall mechanics: a comprehensive study on young poplar trees downregulated for CINNAMYL ALCOHOL DEHYDROGENASE (CAD).

scientific article

Upstream sequences regulating legumin gene expression in heterologous transgenic plants

scientific article published on 01 January 1991

Vessel-Specific Reintroduction of CINNAMOYL-COA REDUCTASE1 (CCR1) in Dwarfed ccr1 Mutants Restores Vessel and Xylary Fiber Integrity and Increases Biomass

scientific article published on 20 November 2017

Visualization of plant cell wall lignification using fluorescence-tagged monolignols

scientific article

WAT1 (WALLS ARE THIN1) defines a novel auxin transporter in plants and integrates auxin signaling in secondary wall formation in Arabidopsis fibers

scientific article

Walls are thin 1 (WAT1), an Arabidopsis homolog of Medicago truncatula NODULIN21, is a tonoplast-localized protein required for secondary wall formation in fibers

scientific article published on 20 May 2010

Wood formation in poplar: identification, characterization, and seasonal variation of xylem proteins

scientific article published in March 2000

cis-Cinnamic Acid Is a Novel, Natural Auxin Efflux Inhibitor That Promotes Lateral Root Formation

scientific article (publication date: 2017)

cis-Cinnamic acid is a natural plant growth-promoting compound

scientific article published on 01 November 2019

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