List of works - Mark P. Foster

An introduction to NMR-based approaches for measuring protein dynamics ⬇️

scientific article published on November 6, 2010

Assembly of the complex between archaeal RNase P proteins RPP30 and Pop5

scientific article published on 13 November 2011

Bimodal high-affinity association of Brd4 with murine leukemia virus integrase and mononucleosomes

scientific article published on 11 February 2014

Characterization of Ad5 E3-14.7K, an adenoviral inhibitor of apoptosis: structure, oligomeric state, and metal binding

scientific article

Conformational and chemical selection by a trans-acting editing domain.

scientific article published on 2 August 2017

Cooperative RNP Assembly: Complementary Rescue of Structural Defects by Protein and RNA Subunits of Archaeal RNase P ⬇️

scientific article published on June 12, 2011

Crystallization and structure determination of the core-binding domain of bacteriophage lambda integrase

scientific article

DNA binding induces a cis-to-trans switch in Cre recombinase to enable intasome assembly

scientific article published on 23 September 2020

DNA recognition via mutual-induced fit by the core-binding domain of bacteriophage lambda integrase

scientific article published on 15 November 2007

DksA2, a zinc-independent structural analog of the transcription factor DksA

scientific article

Domain packing and dynamics in the DNA complex of the N-terminal zinc fingers of TFIIIA

scientific article

Dynamics and DNA substrate recognition by the catalytic domain of lambda integrase

scientific article published in June 2003

Fidelity of tRNA 5'-maturation: a possible basis for the functional dependence of archaeal and eukaryal RNase P on multiple protein cofactors

scientific article

GUARDD: user-friendly MATLAB software for rigorous analysis of CPMG RD NMR data

scientific article

Gene regulation by substoichiometric heterocomplex formation of undecameric TRAP and trimeric anti-TRAP.

scientific article

High-resolution solution structure of the retinoid X receptor DNA-binding domain

scientific article

Homotropic cooperativity from the activation pathway of the allosteric ligand-responsive regulatory trp RNA-binding attenuation protein.

scientific article

Identification of the oriI-binding site of poliovirus 3C protein by nuclear magnetic resonance spectroscopy.

scientific article

Interaction of the HIV-1 intasome with transportin 3 protein (TNPO3 or TRN-SR2)

scientific article

Interaction of the RNA binding fingers of Xenopus transcription factor IIIA with specific regions of 5 S ribosomal RNA

scientific article

Ligand-induced changes in the structure and dynamics of Escherichia coli peptide deformylase

scientific article

MESMER: minimal ensemble solutions to multiple experimental restraints

scientific article published on 10 February 2015

Mapping the surface of Escherichia coli peptide deformylase by NMR with organic solvents

scientific article

Mechanism of flavin mononucleotide cofactor binding to the Desulfovibrio vulgaris flavodoxin. 2. Evidence for cooperative conformational changes involving tryptophan 60 in the interaction between the phosphate- and ring-binding subsites

scientific article published in March 2003

Mechanisms of Cre recombinase synaptic complex assembly and activation illuminated by Cryo-EM

scientific article published on 01 February 2022

Mechanisms of allosteric gene regulation by NMR quantification of microsecond-millisecond protein dynamics

scientific article published on 15 November 2011

Nairaiamides A and B. two novel di-proline heptapeptides isolated from a fijian Lissoclinum bistratum ascidian.

Preparation of uniformly labeled NMR samples in Escherichia coli under the tight control of the araBAD promoter: expression of an archaeal homolog of the RNase P Rpp29 protein

scientific article published in April 2003

Solution NMR of large molecules and assemblies

scientific article published on January 2007

Solution Structure of Pyrococcus furiosus RPP21, a Component of the Archaeal RNase P Holoenzyme, and Interactions with Its RPP29 Protein Partner †

scientific article

Solution structure of the first three zinc fingers of TFIIIA bound to the cognate DNA sequence: determinants of affinity and sequence specificity

scientific article

Structural basis for high-affinity binding of LEDGF PWWP to mononucleosomes ⬇️

scientific article published on February 8, 2013

Structure of Mth11/Mth Rpp29, an essential protein subunit of archaeal and eukaryotic RNase P

scientific article

Structure of Pfu Pop5, an archaeal RNase P protein.

scientific article

TROSY-NMR studies of the 91kDa TRAP protein reveal allosteric control of a gene regulatory protein by ligand-altered flexibility.

scientific article published in October 2002

The L7Ae protein binds to two kink-turns in the Pyrococcus furiosus RNase P RNA.

scientific article

Thermodynamics of Coupled Folding in the Interaction of Archaeal RNase P Proteins RPP21 and RPP29 ⬇️

scientific article published on January 18, 2012

Three-dimensional solution structure of conotoxin psi-PIIIE, an acetylcholine gated ion channel antagonist

scientific article

Trans cooperativity by a split DNA recombinase: the central and catalytic domains of bacteriophage lambda integrase cooperate in cleaving DNA substrates when the two domains are not covalently linked.

scientific article

Tuning Riboswitch Regulation through Conformational Selection ⬇️

scientific article published on November 12, 2010

Uncovering the stoichiometry of Pyrococcus furiosus RNase P, a multi-subunit catalytic ribonucleoprotein complex, by surface-induced dissociation and ion mobility mass spectrometry

scientific article published on 4 September 2014

pH dependence of the stress regulator DksA

scientific article published on 23 March 2015

List of works by Mark P. Foster

An introduction to NMR-based approaches for measuring protein dynamics ⬇️

Assembly of the complex between archaeal RNase P proteins RPP30 and Pop5

Bimodal high-affinity association of Brd4 with murine leukemia virus integrase and mononucleosomes

Characterization of Ad5 E3-14.7K, an adenoviral inhibitor of apoptosis: structure, oligomeric state, and metal binding

Conformational and chemical selection by a trans-acting editing domain.

Cooperative RNP Assembly: Complementary Rescue of Structural Defects by Protein and RNA Subunits of Archaeal RNase P ⬇️

Crystallization and structure determination of the core-binding domain of bacteriophage lambda integrase

DNA binding induces a cis-to-trans switch in Cre recombinase to enable intasome assembly

DNA recognition via mutual-induced fit by the core-binding domain of bacteriophage lambda integrase

DksA2, a zinc-independent structural analog of the transcription factor DksA

Domain packing and dynamics in the DNA complex of the N-terminal zinc fingers of TFIIIA

Dynamics and DNA substrate recognition by the catalytic domain of lambda integrase

Fidelity of tRNA 5'-maturation: a possible basis for the functional dependence of archaeal and eukaryal RNase P on multiple protein cofactors

GUARDD: user-friendly MATLAB software for rigorous analysis of CPMG RD NMR data

Gene regulation by substoichiometric heterocomplex formation of undecameric TRAP and trimeric anti-TRAP.

High-resolution solution structure of the retinoid X receptor DNA-binding domain

Homotropic cooperativity from the activation pathway of the allosteric ligand-responsive regulatory trp RNA-binding attenuation protein.

Identification of the oriI-binding site of poliovirus 3C protein by nuclear magnetic resonance spectroscopy.

Interaction of the HIV-1 intasome with transportin 3 protein (TNPO3 or TRN-SR2)

Interaction of the RNA binding fingers of Xenopus transcription factor IIIA with specific regions of 5 S ribosomal RNA

Ligand-induced changes in the structure and dynamics of Escherichia coli peptide deformylase

MESMER: minimal ensemble solutions to multiple experimental restraints

Mapping the surface of Escherichia coli peptide deformylase by NMR with organic solvents

Mechanism of flavin mononucleotide cofactor binding to the Desulfovibrio vulgaris flavodoxin. 2. Evidence for cooperative conformational changes involving tryptophan 60 in the interaction between the phosphate- and ring-binding subsites

Mechanisms of Cre recombinase synaptic complex assembly and activation illuminated by Cryo-EM

Mechanisms of allosteric gene regulation by NMR quantification of microsecond-millisecond protein dynamics

Nairaiamides A and B. two novel di-proline heptapeptides isolated from a fijian Lissoclinum bistratum ascidian.

Preparation of uniformly labeled NMR samples in Escherichia coli under the tight control of the araBAD promoter: expression of an archaeal homolog of the RNase P Rpp29 protein

Solution NMR of large molecules and assemblies

Solution Structure of Pyrococcus furiosus RPP21, a Component of the Archaeal RNase P Holoenzyme, and Interactions with Its RPP29 Protein Partner †

Solution structure of the first three zinc fingers of TFIIIA bound to the cognate DNA sequence: determinants of affinity and sequence specificity

Structural basis for high-affinity binding of LEDGF PWWP to mononucleosomes ⬇️

Structure of Mth11/Mth Rpp29, an essential protein subunit of archaeal and eukaryotic RNase P

Structure of Pfu Pop5, an archaeal RNase P protein.

TROSY-NMR studies of the 91kDa TRAP protein reveal allosteric control of a gene regulatory protein by ligand-altered flexibility.

The L7Ae protein binds to two kink-turns in the Pyrococcus furiosus RNase P RNA.

Thermodynamics of Coupled Folding in the Interaction of Archaeal RNase P Proteins RPP21 and RPP29 ⬇️

Three-dimensional solution structure of conotoxin psi-PIIIE, an acetylcholine gated ion channel antagonist

Trans cooperativity by a split DNA recombinase: the central and catalytic domains of bacteriophage lambda integrase cooperate in cleaving DNA substrates when the two domains are not covalently linked.

Tuning Riboswitch Regulation through Conformational Selection ⬇️

Uncovering the stoichiometry of Pyrococcus furiosus RNase P, a multi-subunit catalytic ribonucleoprotein complex, by surface-induced dissociation and ion mobility mass spectrometry

pH dependence of the stress regulator DksA