List of works - Liam J. McGuffin

A novel non-canonical mechanism of regulation of MST3 (mammalian Sterile20-related kinase 3).

scientific article published on March 2012

Accurate template-based modeling in CASP12 using the IntFOLD4-TS, ModFOLD6, and ReFOLD methods

scientific article published on 27 July 2017

Assembling novel protein folds from super-secondary structural fragments

scientific article published on 01 January 2003

Assessing the quality of modelled 3D protein structures using the ModFOLD server.

scientific article

Automated tertiary structure prediction with accurate local model quality assessment using the intfold‐ts method ⬇️

scientific article published on August 30, 2011

Benchmarking consensus model quality assessment for protein fold recognition.

scientific article

Benchmarking secondary structure prediction for fold recognition

scientific article published on 01 August 2003

Disorder Prediction Methods, Their Applicability to Different Protein Targets and Their Usefulness for Guiding Experimental Studies

scientific article

Dominant β-catenin mutations cause intellectual disability with recognizable syndromic features

scientific article

Estimation of model accuracy in CASP13

scientific article published on 16 July 2019

Evolution. Evolutionary resurrection of flagellar motility via rewiring of the nitrogen regulation system

scientific article published in February 2015

FunFOLD: an improved automated method for the prediction of ligand binding residues using 3D models of proteins

scientific article

FunFOLDQA: a quality assessment tool for protein-ligand binding site residue predictions

scientific article (publication date: 2012)

GRID and docking analyses reveal a molecular basis for flavonoid inhibition of Src family kinase activity

scientific article published on 9 June 2015

Genetic diversity at the Dhn3 locus in Turkish Hordeum spontaneum populations with comparative structural analyses

scientific article published on 12 February 2016

High throughput profile-profile based fold recognition for the entire human proteome

scientific article published on 7 June 2006

Improvement of 3D protein models using multiple templates guided by single-template model quality assessment

scientific article published on 15 May 2012

Improvement of the GenTHREADER method for genomic fold recognition

scientific article published in May 2003

Improving sequence-based fold recognition by using 3D model quality assessment

scientific article published on 14 June 2005

In silico Identification and Characterization of Protein-Ligand Binding Sites.

scientific article

In silicoidentification and three-dimensional modelling of the missense mutation in ADAMTS2 in a sheep flock with dermatosparaxis

article

IntFOLD: an integrated server for modelling protein structures and functions from amino acid sequences.

scientific article

IntFOLD: an integrated web resource for high performance protein structure and function prediction

scientific article published on 01 July 2019

Intrinsic disorder prediction from the analysis of multiple protein fold recognition models

scientific article published on 25 June 2008

Methods For Estimation Of Model Accuracy In CASP12

Methods for estimation of model accuracy in CASP12.

scientific article published on 4 October 2017

ModFOLD6: an accurate web server for the global and local quality estimation of 3D protein models

scientific article published on 29 April 2017

Predicting metal-binding site residues in low-resolution structural models.

scientific article

Prediction of global and local model quality in CASP8 using the ModFOLD server.

scientific article

Prediction of novel and analogous folds using fragment assembly and fold recognition.

scientific article

Predictive and Experimental Approaches for Elucidating Protein-Protein Interactions and Quaternary Structures

scientific article published on 5 December 2017

Protein structure prediction servers at University College London

scientific article

Proteins and Their Interacting Partners: An Introduction to Protein-Ligand Binding Site Prediction Methods

scientific article

Proteogenomics and in silico structural and functional annotation of the barley powdery mildew Blumeria graminis f. sp. hordei

scientific article published on 29 March 2011

RAPIDSNPs: A new computational pipeline for rapidly identifying key genetic variants reveals previously unidentified SNPs that are significantly associated with individual platelet responses

scientific article published on 25 April 2017

Rapid model quality assessment for protein structure predictions using the comparison of multiple models without structural alignments.

scientific article

Rapid protein domain assignment from amino acid sequence using predicted secondary structure

scientific article

ReFOLD: a server for the refinement of 3D protein models guided by accurate quality estimates

scientific article published on 10 April 2017

SOcK, MiSTs, MASK and STicKs: the GCKIII (germinal centre kinase III) kinases and their heterologous protein-protein interactions

scientific article published on August 2013

Secondary structure prediction with support vector machines

scientific article

Structure and evolution of barley powdery mildew effector candidates

scientific article published on 11 December 2012

Targeting novel folds for structural genomics

scientific article

The DISOPRED server for the prediction of protein disorder

scientific article

The FunFOLD2 server for the prediction of protein-ligand interactions

scientific article

The Genomic Threading Database

scientific article published on 01 January 2004

The Genomic Threading Database: a comprehensive resource for structural annotations of the genomes from key organisms

scientific article published on January 2004

The IntFOLD server: an integrated web resource for protein fold recognition, 3D model quality assessment, intrinsic disorder prediction, domain prediction and ligand binding site prediction

scientific article

The ModFOLD server for the quality assessment of protein structural models

article

The ModFOLD4 server for the quality assessment of 3D protein models

scientific article published on 25 April 2013

The binding site distance test score: a robust method for the assessment of predicted protein binding sites.

scientific article

The mysterious presence of a 5-methylcytosine oxidase in the Drosophila genome: possible explanations

scientific article published on 19 September 2013

Toolbox for Protein Structure Prediction.

scientific article

List of works by Liam J. McGuffin

A novel non-canonical mechanism of regulation of MST3 (mammalian Sterile20-related kinase 3).

Accurate template-based modeling in CASP12 using the IntFOLD4-TS, ModFOLD6, and ReFOLD methods

Assembling novel protein folds from super-secondary structural fragments

Assessing the quality of modelled 3D protein structures using the ModFOLD server.

Automated tertiary structure prediction with accurate local model quality assessment using the intfold‐ts method ⬇️

Benchmarking consensus model quality assessment for protein fold recognition.

Benchmarking secondary structure prediction for fold recognition

Disorder Prediction Methods, Their Applicability to Different Protein Targets and Their Usefulness for Guiding Experimental Studies

Dominant β-catenin mutations cause intellectual disability with recognizable syndromic features

Estimation of model accuracy in CASP13

Evolution. Evolutionary resurrection of flagellar motility via rewiring of the nitrogen regulation system

FunFOLD: an improved automated method for the prediction of ligand binding residues using 3D models of proteins

FunFOLDQA: a quality assessment tool for protein-ligand binding site residue predictions

GRID and docking analyses reveal a molecular basis for flavonoid inhibition of Src family kinase activity

Genetic diversity at the Dhn3 locus in Turkish Hordeum spontaneum populations with comparative structural analyses

High throughput profile-profile based fold recognition for the entire human proteome

Improvement of 3D protein models using multiple templates guided by single-template model quality assessment

Improvement of the GenTHREADER method for genomic fold recognition

Improving sequence-based fold recognition by using 3D model quality assessment

In silico Identification and Characterization of Protein-Ligand Binding Sites.

In silicoidentification and three-dimensional modelling of the missense mutation in ADAMTS2 in a sheep flock with dermatosparaxis

IntFOLD: an integrated server for modelling protein structures and functions from amino acid sequences.

IntFOLD: an integrated web resource for high performance protein structure and function prediction

Intrinsic disorder prediction from the analysis of multiple protein fold recognition models

Methods For Estimation Of Model Accuracy In CASP12

Methods for estimation of model accuracy in CASP12.

ModFOLD6: an accurate web server for the global and local quality estimation of 3D protein models

Predicting metal-binding site residues in low-resolution structural models.

Prediction of global and local model quality in CASP8 using the ModFOLD server.

Prediction of novel and analogous folds using fragment assembly and fold recognition.

Predictive and Experimental Approaches for Elucidating Protein-Protein Interactions and Quaternary Structures

Protein structure prediction servers at University College London

Proteins and Their Interacting Partners: An Introduction to Protein-Ligand Binding Site Prediction Methods

Proteogenomics and in silico structural and functional annotation of the barley powdery mildew Blumeria graminis f. sp. hordei

RAPIDSNPs: A new computational pipeline for rapidly identifying key genetic variants reveals previously unidentified SNPs that are significantly associated with individual platelet responses

Rapid model quality assessment for protein structure predictions using the comparison of multiple models without structural alignments.

Rapid protein domain assignment from amino acid sequence using predicted secondary structure

ReFOLD: a server for the refinement of 3D protein models guided by accurate quality estimates

SOcK, MiSTs, MASK and STicKs: the GCKIII (germinal centre kinase III) kinases and their heterologous protein-protein interactions

Secondary structure prediction with support vector machines

Structure and evolution of barley powdery mildew effector candidates

Targeting novel folds for structural genomics

The DISOPRED server for the prediction of protein disorder

The FunFOLD2 server for the prediction of protein-ligand interactions

The Genomic Threading Database

The Genomic Threading Database: a comprehensive resource for structural annotations of the genomes from key organisms

The IntFOLD server: an integrated web resource for protein fold recognition, 3D model quality assessment, intrinsic disorder prediction, domain prediction and ligand binding site prediction

The ModFOLD server for the quality assessment of protein structural models

The ModFOLD4 server for the quality assessment of 3D protein models

The binding site distance test score: a robust method for the assessment of predicted protein binding sites.

The mysterious presence of a 5-methylcytosine oxidase in the Drosophila genome: possible explanations

Toolbox for Protein Structure Prediction.