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List of works by Ambrosius P. Snijders

9 Functional Genomics of the Thermo-Acidophilic Archaeon Sulfolobus solfataricus

A complex secretory program orchestrated by the inflammasome controls paracrine senescence

scientific article

A cross-species quantitative proteomic study of salt adaptation in a halotolerant environmental isolate using 15N metabolic labelling

scientific article published in June 2008

A fast method for quantitative proteomics based on a combination between two-dimensional electrophoresis and 15N-metabolic labelling.

scientific article published in August 2005

A non-canonical function of Plk4 in centriolar satellite integrity and ciliogenesis through PCM1 phosphorylation

scientific article

A protease cascade regulates release of the human malaria parasite Plasmodium falciparum from host red blood cells

scientific article published on 19 February 2018

A systematic evaluation of chip-based nanoelectrospray parameters for rapid identification of proteins from a complex mixture

scientific article published on 30 June 2007

A systematic genomic screen implicates nucleocytoplasmic transport and membrane growth in nuclear size control.

scientific article

A ubiquitylation site in Cockayne syndrome B required for repair of oxidative DNA damage, but not for transcription-coupled nucleotide excision repair

scientific article published on 07 April 2016

Activation of ULK Kinase and Autophagy by GABARAP Trafficking from the Centrosome Is Regulated by WAC and GM130.

scientific article

An Integrated Chemical Proteomics Approach for Quantitative Profiling of Intracellular ADP-Ribosylation

scientific article published on 30 April 2019

Analysis of Signaling Endosome Composition and Dynamics Using SILAC in Embryonic Stem Cell-Derived Neurons

scientific article published on 18 December 2015

Analysis of arginine and lysine methylation utilizing peptide separations at neutral pH and electron transfer dissociation mass spectrometry

scientific article published on 20 September 2009

Archaeal MBF1 binds to 30S and 70S ribosomes via its helix-turn-helix domain

scientific article

Arginine methylation and citrullination of splicing factor proline- and glutamine-rich (SFPQ/PSF) regulates its association with mRNA.

scientific article

Arginine methylation of REF/ALY promotes efficient handover of mRNA to TAP/NXF1.

scientific article published on 2 February 2010

Author Correction: Bi-directional cell-pericellular matrix interactions direct stem cell fate

scientific article published in Nature Communications

Author Correction: Bi-directional cell-pericellular matrix interactions direct stem cell fate

scientific article published on 18 December 2018

Author Correction: Spatiotemporal regulation of Aurora B recruitment ensures release of cohesion during C. elegans oocyte meiosis

scientific article published in Nature Communications

Author Correction: YAP1/TAZ drives ependymoma-like tumour formation in mice

scientific article published on 28 September 2020

Autocatalytic activation of a malarial egress protease is druggable and requires a protein cofactor.

scientific article

Bi-directional cell-pericellular matrix interactions direct stem cell fate

scientific article published in Nature Communications

CD9 identifies pancreatic cancer stem cells and modulates glutamine metabolism to fuel tumour growth

scientific article published on 04 November 2019

CDK Substrate Phosphorylation and Ordering the Cell Cycle

scientific article published on December 2016

Ca

scientific article

Casein kinase 1γ acts as a molecular switch for cell polarization through phosphorylation of the polarity factor Tea1 in fission yeast

scientific article published on 2 November 2015

Centriolar Satellites Control GABARAP Ubiquitination and GABARAP-Mediated Autophagy.

scientific article published on 10 July 2017

Characterization of post-translational modifications of the linker histones H1 and H5 from chicken erythrocytes using mass spectrometry

scientific article published on 28 August 2008

Circadian rhythms in the absence of the clock gene Bmal1

scientific article published on 01 February 2020

Comparative network clustering of direct repeats (DRs) and cas genes confirms the possibility of the horizontal transfer of CRISPR locus among bacteria

scientific article published on 23 May 2010

Crumbs promotes expanded recognition and degradation by the SCF(Slimb/β-TrCP) ubiquitin ligase

scientific article

Cryo-EM structures of the XPF-ERCC1 endonuclease reveal how DNA-junction engagement disrupts an auto-inhibited conformation

scientific article published on 28 February 2020

Crystal structure of human CDC7 kinase in complex with its activator DBF4

scientific article

Cyclic AMP signalling controls key components of malaria parasite host cell invasion machinery

scientific article published on 10 May 2019

Cyclin D mediates tolerance of genome-doubling in cancers with functional p53.

scientific article

Cysteine-Reactive Free ISG15 Generates IL-1β-Producing CD8α+ Dendritic Cells at the Site of Infection.

scientific article published on 11 June 2018

DNA-guided DNA interference by a prokaryotic Argonaute

scientific article published on 16 February 2014

Divergent roles for the RH5 complex components, CyRPA and RIPR in human-infective malaria parasites.

scientific article published on 11 June 2019

Engineering transplantable jejunal mucosal grafts using patient-derived organoids from children with intestinal failure

scientific article published on 07 September 2020

Enigma proteins regulate YAP mechanotransduction

scientific article published in 2018

Erratum: Structural Basis of Eco1-Mediated Cohesin Acetylation

scientific article published on 11 April 2017

Forcing the reversibility of a mechanochemical reaction

scientific article published in Nature Communications

Functional cross-talk between allosteric effects of activating and inhibiting ligands underlies PKM2 regulation

Gametes alter the oviductal secretory proteome

scientific article published on 16 August 2005

Glutamate Racemase Is the Primary Target of β-Chloro-d-Alanine in Mycobacterium tuberculosis

scientific article published on August 2016

Heteromeric interactions regulate butyrophilin (BTN) and BTN-like molecules governing γδ T cell biology

scientific article published on 16 January 2018

Identification and biochemical analysis of a novel APOB mutation that causes autosomal dominant hypercholesterolemia

scientific article published on 13 June 2013

Identification and characterization of sulfolobus solfataricus P2 proteome using multidimensional liquid phase protein separations

scientific article published on 9 May 2008

Identification of SUMO conjugation sites in the budding yeast proteome

scientific article published on 2 October 2017

Identification of a novel alpha-galactosidase from the hyperthermophilic archaeon Sulfolobus solfataricus

scientific article published on April 2006

Identification of the Missing Links in Prokaryotic Pentose Oxidation Pathways

scientific article published in Journal of Biological Chemistry

Integrin Beta 3 Regulates Cellular Senescence by Activating the TGF-β Pathway

scientific article published on March 2017

Interplay between Homeobox proteins and Polycomb repressive complexes in p16INK⁴a regulation

scientific article

Malaria Parasite Schizont Egress Antigen-1 Plays an Essential Role in Nuclear Segregation during Schizogony.

scientific article published on 9 March 2021

MicroRNA regulation of Cbx7 mediates a switch of Polycomb orthologs during ESC differentiation

scientific article

Modulation of the oviductal environment by gametes

scientific article

Multidimensional liquid phase protein separations in conjunction with stable isotope labelling for quantitative proteomics

scientific article published in November 2007

Multiomic Analysis of the UV-Induced DNA Damage Response ⬇️

scientific article

Murine Gbp1 and Gbp2 are ubiquitinated independent of Toxoplasma gondii infection.

scientific article

Neighboring cells override 3D hydrogel matrix cues to drive human MSC quiescence

Notum deacylates Wnt proteins to suppress signalling activity

scientific article

Novel approach for peptide quantitation and sequencing based on 15N and 13C metabolic labeling

scientific article (publication date: 2005)

Nuclear proteasomes carry a constitutive posttranslational modification which derails SDS-PAGE (but not CTAB-PAGE)

scholarly article by David S. Pitcher published in December 2014

Nuclear proteasomes carry a constitutive posttranslational modification which derails SDS-PAGE (but not CTAB-PAGE)

scientific article published in December 2014

Oncogenic RAS Signaling Promotes Tumor Immunoresistance by Stabilizing PD-L1 mRNA.

scientific article published on 5 December 2017

PIM1 controls GBP1 activity to limit self-damage and to guard against pathogen infection

scientific article published on 11 October 2023

PP2ACdc55 Phosphatase Imposes Ordered Cell-Cycle Phosphorylation by Opposing Threonine Phosphorylation

scientific article published on 12 January 2017

Perturbation and interpretation of nitrogen isotope distribution patterns in proteomics

scientific article published in November 2005

Phosphodiesterase beta is the master regulator of cAMP signalling during malaria parasite invasion ⬇️

scientific article

Phosphoproteome dynamics during mitotic exit in budding yeast

scientific article published on 12 April 2018

Photosensitized UVA-Induced Cross-Linking between Human DNA Repair and Replication Proteins and DNA Revealed by Proteomic Analysis

scientific article published on 21 September 2016

Polε Instability Drives Replication Stress, Abnormal Development, and Tumorigenesis.

scientific article published on 10 May 2018

Prereplicative complexes assembled in vitro support origin-dependent and independent DNA replication

scientific article published on 24 February 2014

Proteasomal degradation of the tumour suppressor FBW7 requires branched ubiquitylation by TRIP12

scientific article published on 06 April 2021

Publisher Correction: A protease cascade regulates release of the human malaria parasite Plasmodium falciparum from host red blood cells

scientific article published on 01 April 2018

Quantitative Phosphoproteomics Reveals the Signaling Dynamics of Cell-Cycle Kinases in the Fission Yeast Schizosaccharomyces pombe

scientific article published on 10 July 2018

Reconstruction of central carbon metabolism in Sulfolobus solfataricus using a two-dimensional gel electrophoresis map, stable isotope labelling and DNA microarray analysis

scientific article published in March 2006

Relative quantification of proteins across the species boundary through the use of shared peptides

scientific article

Repression of Divergent Noncoding Transcription by a Sequence-Specific Transcription Factor

Ribosomopathy-associated mutations cause proteotoxic stress that is alleviated by TOR inhibition

scientific article published on 25 January 2021

STXBP1 promotes Weibel-Palade body exocytosis through its interaction with the Rab27A effector Slp4-a

scientific article published on 3 April 2014

Selective inhibition of cancer cell self-renewal through a Quisinostat-histone H1.0 axis

scientific article published on 14 April 2020

Shotgun proteome analysis utilising mixed mode (reversed phase-anion exchange chromatography) in conjunction with reversed phase liquid chromatography mass spectrometry analysis

scientific article published on August 2010

Shotgun proteomics of cyanobacteria--applications of experimental and data-mining techniques

scientific article

Small CRISPR RNAs guide antiviral defense in prokaryotes

scientific article

Spatiotemporal regulation of Aurora B recruitment ensures release of cohesion during C. elegans oocyte meiosis

scientific article published on 26 February 2018

Structural Basis of Eco1-Mediated Cohesin Acetylation

scientific article published on 14 March 2017

Structural basis for CRISPR RNA-guided DNA recognition by Cascade

scientific article

Structural basis for nuclear import of splicing factors by human Transportin 3

scientific article

Structure of the cohesin loader Scc2.

scientific article published on 6 January 2017

Structure of the ribosome associating GTPase HflX.

scientific article published in February 2010

TBC1D14 regulates autophagy via the TRAPP complex and ATG9 traffic

scientific article

TLR and TNF-R1 activation of the MKK3/MKK6-p38α axis in macrophages is mediated by TPL-2 kinase

scientific article

TRF2-independent chromosome end protection during pluripotency

scientific article published on 25 November 2020

The FA Core Complex Contains a Homo-dimeric Catalytic Module for the Symmetric Mono-ubiquitination of FANCI-FANCD2.

scientific article published on 09 December 2016

The MAP kinase pathway coordinates crossover designation with disassembly of synaptonemal complex proteins during meiosis

scientific article published on 27 February 2016

The RIG-I-like receptor LGP2 inhibits Dicer-dependent processing of long double-stranded RNA and blocks RNA interference in mammalian cells

scientific article published on 19 January 2018

The conserved Wdr8-hMsd1/SSX2IP complex localises to the centrosome and ensures proper spindle length and orientation

scientific journal article

The deubiquitinase USP9X regulates FBW7 stability and suppresses colorectal cancer

scientific article published on 18 January 2018

The fidelity of synaptonemal complex assembly is regulated by a signaling mechanism that controls early meiotic progression.

scientific article

The life and death of sponge cells

scientific article published in February 2004

The proteasome controls ESCRT-III-mediated cell division in an archaeon

scientific article

UBR5-mediated ubiquitination of ATMIN is required for ionizing radiation-induced ATM signaling and function

scientific article

UIF, a New mRNA export adaptor that works together with REF/ALY, requires FACT for recruitment to mRNA

scientific article

USP11 deubiquitinates RAE1 and plays a key role in bipolar spindle formation

scientific article published on 2 January 2018

USP25 promotes pathological HIF-1-driven metabolic reprogramming and is a potential therapeutic target in pancreatic cancer

scientific article published on 19 April 2022

USP7 Is a Tumor-Specific WNT Activator for APC-Mutated Colorectal Cancer by Mediating β-Catenin Deubiquitination

scientific article published in October 2017

Ubiquitin activation is essential for schizont maturation in Plasmodium falciparum blood-stage development

scientific article published on 22 June 2020

Unbiased Characterization of the Senescence-Associated Secretome Using SILAC-Based Quantitative Proteomics

scientific article published on 01 January 2013

aPKC Inhibition by Par3 CR3 Flanking Regions Controls Substrate Access and Underpins Apical-Junctional Polarization.

scientific article published on August 2016

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