List of works - Wiktor Koźmiński

"CON-CON" assignment strategy for highly flexible intrinsically disordered proteins

scientific article published on 19 October 2014

(1)H, (13)C, and (15)N chemical shifts assignments for human endothelial monocyte-activating polypeptide EMAP II.

scientific article published on 6 March 2012

(1)H, (15)N, (13)C resonance assignment of human osteopontin.

scientific article published on 24 January 2015

(13)C-detected NMR experiments for automatic resonance assignment of IDPs and multiple-fixing SMFT processing.

scientific article published on 23 April 2015

15NH4+ ion movement inside d(G4T4G4)2 G-quadruplex is accelerated in the presence of smaller Na+ ions

scientific article published on 16 June 2004

1H, 13C and 15N backbone resonance assignment of BRCA1 fragment 219-504

scientific article published on 24 June 2020

1H, 15N, 13C resonance assignment of human GAP-43.

scientific article published on 9 January 2016

1H, 15N, 13C resonance assignment of plant dehydrin early response to dehydration 10 (ERD10).

scientific article

4D Non-uniformly sampled C,C-NOESY experiment for sequential assignment of 13C, 15N-labeled RNAs

scientific article published on 21 August 2013

5D 13C-detected experiments for backbone assignment of unstructured proteins with a very low signal dispersion

scientific article published on 20 March 2011

A protein backbone psi and phi angle dependence of 2J(N(i),C alpha(i-1)): the new NMR experiment and quantum chemical calculations

scientific article published on 01 February 2005

A pure-phase homonuclear J-modulated HMQC experiment with tilted cross-peak patterns for an accurate determination of homonuclear coupling constants

scientific article published on 01 November 1999

A set of 4D NMR experiments of enhanced resolution for easy resonance assignment in proteins.

scientific article published on 31 October 2009

Accelerating diffusion-ordered NMR spectroscopy by joint sparse sampling of diffusion and time dimensions

scientific article published on 24 April 2014

Amino acid recognition for automatic resonance assignment of intrinsically disordered proteins

scientific article

An experimental test of C-N bond twisting in the TICT state: syn-anti photoisomerization in 2-(N-methyl-N-isopropylamino)-5-cyanopyridine.

scientific article published in March 2002

Analysis of complex reacting mixtures by time-resolved 2D NMR

scientific article published on 26 December 2014

Applications of high dimensionality experiments to biomolecular NMR.

scientific article published on 11 July 2015

Artifacts in time-resolved NUS: A case study of NOE build-up curves from 2D NOESY.

scientific article

Backbone and partial side chain assignment of the microtubule binding domain of the MAP1B light chain

scientific article

Biochemical and Structural Characterization of the Interaction between the Siderocalin NGAL/LCN2 (Neutrophil Gelatinase-associated Lipocalin/Lipocalin 2) and the N-terminal Domain of Its Endocytic Receptor SLC22A17.

scientific article

Biosynthetic engineered B28(K)-B29(P) human insulin monomer structure in water and in water/acetonitrile solutions

scientific article

C4'/H4' selective, non-uniformly sampled 4D HC(P)CH experiment for sequential assignments of (13)C-labeled RNAs.

scientific article

Complete1H and13C signal assignment of prenol-10 with 3D NMR spectroscopy

scientific article

Conformational Equilibrium of Cinchonidine in CD Solution. Alternative NMR/DFT Approach

scientific article published on 21 September 2018

Crystal and electronic structure, lattice dynamics and thermal properties of Ag(I)(SO3)R (R = F, CF3) Lewis acids in the solid state

scientific article published on 19 December 2011

Determination of heteronuclear coupling constants from 3D HSQC-TOCSY experiment with optimized random sampling of evolution time space

scientific article published in March 2009

Determination of spin-spin couplings from ultrahigh resolution 3D NMR spectra obtained by optimized random sampling and multidimensional Fourier transformation

scientific article published in April 2008

Direct insight into insulin aggregation by 2D NMR complemented by PFGSE NMR.

scientific article published in May 2008

Efficient compensation of low-frequency magnetic field disturbances in NMR with fluxgate sensors.

scientific article

Experimental and Computational Studies on Structure and Energetic Properties of Halogen Derivatives of 2-Deoxy-D-Glucose

scientific article published on 2 April 2021

Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein

scientific article published on 18 July 2016

Generalized Fourier transform for non-uniform sampled data.

scientific article

High dimensional and high resolution pulse sequences for backbone resonance assignment of intrinsically disordered proteins

scientific article published on 17 February 2012

High resolution 4D HPCH experiment for sequential assignment of (13)C-labeled RNAs via phosphodiester backbone

scientific article

High-dimensional NMR methods for intrinsically disordered proteins studies

scientific article published on 27 April 2018

High-dimensional NMR spectra for structural studies of biomolecules

scientific article published on 21 June 2013

High-dimensionality 13C direct-detected NMR experiments for the automatic assignment of intrinsically disordered proteins.

scientific article

Insight into human insulin aggregation revisited using NMR derived translational diffusion parameters

scientific article published on 12 June 2018

Insights from impedance spectroscopy into the mechanism of thermal decomposition of M(NH2BH3), M = H, Li, Na, Li(0.5)Na(0.5), hydrogen stores

scientific article published on 20 March 2012

Is There Any Proton Exchange Between Ammonium Ions localized Within the d(G3T4G4)2 Quadruplex?

scientific article published on 01 September 2012

Iterative algorithm of discrete Fourier transform for processing randomly sampled NMR data sets

scientific article

Iterative thresholding algorithm for multiexponential decay applied to PGSE NMR data.

scientific article

J(F,H), J(C,H) and J(H,H) couplings involving the individual methyl group protons in 1,2,3,4-tetrachloro-5,6,7,8-tetrafluoro-9-methyltriptycene. Evidence of blue-shifting hydrogen bond.

scientific article published in December 2007

Joint non-uniform sampling of all incremented time delays for quicker acquisition in protein relaxation studies.

scientific article

Lineshapes and artifacts in Multidimensional Fourier Transform of arbitrary sampled NMR data sets.

scientific article

Metal Exchange in the Interprotein ZnII -Binding Site of the Rad50 Hook Domain: Structural Insights into CdII -Induced DNA-Repair Inhibition

scientific article published on 30 January 2020

Metal-coupled folding as the driving force for the extreme stability of Rad50 zinc hook dimer assembly

scientific article

Multiple quadrature detection in reduced dimensionality experiments

scientific article published in June 2003

NMR studies of chiral recognition by cyclodextrins

scientific article published on February 2004

Narrow peaks and high dimensionalities: exploiting the advantages of random sampling.

scientific article published on 13 January 2009

Non-uniform frequency domain for optimal exploitation of non-uniform sampling.

scientific article published on 25 May 2010

Novel Cyclic Biphalin Analogues by Ruthenium-Catalyzed Ring Closing Metathesis: in Vivo and in Vitro Biological Profile

scientific article published on 08 March 2019

Nuclear overhauser spectroscopy of chiral CHD methylene groups

On the impossibility of determination of stepwise binding constants for the 1 : 2 complex of (+)-camphor with alpha-cyclodextrin.

scientific article published in February 2003

Optimization of random time domain sampling in multidimensional NMR

scientific article published on 12 February 2008

Peptides and peptidoaldehydes as substrates for the Pictet-Spengler reaction

scientific article published on 28 May 2013

Phase transition induced improvement in H2 desorption kinetics: the case of the high-temperature form of Y(BH4)3.

scientific article published on 4 April 2011

Probing Local Backbone Geometries in Intrinsically Disordered Proteins by Cross-Correlated NMR Relaxation

scientific article

Probing local backbone geometries in intrinsically disordered proteins by cross-correlated NMR relaxation

scientific article published on 20 March 2013

Protonation-dependent conformational variability of intrinsically disordered proteins.

scientific article

Pure-Phase Homo- and Heteronuclear J Spectra with Tilted Cross Peaks for an Accurate Determination of Coupling Constants

scientific article published on 01 March 1997

Random sampling in multidimensional NMR spectroscopy.

scientific article published on 03 August 2010

Random sampling of evolution time space and Fourier transform processing

scientific article published on 21 September 2006

Reconstruction of non-uniformly sampled five-dimensional NMR spectra by signal separation algorithm

scientific article

Selective diagonal-free (13)C, (13)C-edited aliphatic-aromatic NOESY experiment with non-uniform sampling

scientific article published on 09 May 2013

Sensitivity improvement and new acquisition scheme of heteronuclear active-coupling-pattern-tilting spectroscopy

scientific article published on 01 February 2000

Simplified multiplet pattern HSQC-TOCSY experiment for accurate determination of long-range heteronuclear coupling constants

scientific article published on 01 April 1999

Six- and seven-dimensional experiments by combination of sparse random sampling and projection spectroscopy dedicated for backbone resonance assignment of intrinsically disordered proteins

scientific article

Spatial structure and NMR spectra of strained [2.2.2]cyclophanes

scientific article

Speeding up sequence specific assignment of IDPs

Strategy for complete NMR assignment of disordered proteins with highly repetitive sequences based on resolution-enhanced 5D experiments

scientific article

Structural analysis of 25-hydroxycholesterol stereoisomers differing in configuration in position 17 and 20, by three-dimensional NMR spectra

scientific article published on 22 December 2018

Structure and Dynamics of the Huntingtin Exon-1 N-Terminus: A Solution NMR Perspective

scientific article

Structure and dynamics of Helicobacter pylori nickel-chaperone HypA: an integrated approach using NMR spectroscopy, functional assays and computational tools

scientific article published on 27 September 2018

Study of near-symmetric cyclodextrins by compressed sensing 2D NMR.

scientific article

Suppression of sampling artefacts in high-resolution four-dimensional NMR spectra using signal separation algorithm

scientific article

Synthesis of rigid tryptophan mimetics by the diastereoselective Pictet-Spengler reaction of β³-homo-tryptophan derivatives with chiral α-amino aldehydes

scientific article published on 01 December 2015

TSAR: a program for automatic resonance assignment using 2D cross-sections of high dimensionality, high-resolution spectra

scientific article published on 18 July 2012

The DQ-HN[CACB] and DQ-HN(CO)[CACB] sequences with evolution of double quantum Calpha-Cbeta coherences

scientific article published on 01 November 2004

The New Active-Coupling-Pattern Tilting Experiment for an Efficient and Accurate Determination of Homonuclear Coupling Constants ⬇️

scientific article published on 01 September 1998

The RxLR Motif of the Host Targeting Effector AVR3a of Phytophthora infestans Is Cleaved before Secretion

scientific article published on 18 May 2017

The Two Isoforms of Lyn Display Different Intramolecular Fuzzy Complexes with the SH3 Domain

scientific article published on 23 October 2018

The new HMQC-based technique for the quantitative determination of heteronuclear coupling constants. Application for the measurement of 3J(H'(i),P(i+1)) in DNA oligomers.

scientific article

The set of triple-resonance sequences with a multiple quantum coherence evolution period

scientific article published on 01 December 2004

The solution structure of the MANEC-type domain from hepatocyte growth factor activator inhibitor-1 reveals an unexpected PAN/apple domain-type fold

scientific article

The studies of tautomerism in 6-mercaptopurine derivatives by 1H–13C, 1H–15N NMR and 13C, 15N CPMAS-experimental and quantum chemical approach

Three-dimensional NMR Spectroscopy of organic molecules by random sampling of evolution time space and multidimensional Fourier transformation

scientific article published on 01 February 2007

Two-dimensional Fourier transform of arbitrarily sampled NMR data sets.

scientific article

¹H, ¹³C and ¹⁵N resonance assignments of human BASP1

scientific article published on 20 November 2012

¹H, ¹³C, and ¹⁵N backbone and side chain resonance assignments of the C-terminal DNA binding and dimerization domain of v-Myc

scientific article published on 20 November 2012

List of works by Wiktor Koźmiński

"CON-CON" assignment strategy for highly flexible intrinsically disordered proteins

(1)H, (13)C, and (15)N chemical shifts assignments for human endothelial monocyte-activating polypeptide EMAP II.

(1)H, (15)N, (13)C resonance assignment of human osteopontin.

(13)C-detected NMR experiments for automatic resonance assignment of IDPs and multiple-fixing SMFT processing.

15NH4+ ion movement inside d(G4T4G4)2 G-quadruplex is accelerated in the presence of smaller Na+ ions

1H, 13C and 15N backbone resonance assignment of BRCA1 fragment 219-504

1H, 15N, 13C resonance assignment of human GAP-43.

1H, 15N, 13C resonance assignment of plant dehydrin early response to dehydration 10 (ERD10).

4D Non-uniformly sampled C,C-NOESY experiment for sequential assignment of 13C, 15N-labeled RNAs

5D 13C-detected experiments for backbone assignment of unstructured proteins with a very low signal dispersion

A protein backbone psi and phi angle dependence of 2J(N(i),C alpha(i-1)): the new NMR experiment and quantum chemical calculations

A pure-phase homonuclear J-modulated HMQC experiment with tilted cross-peak patterns for an accurate determination of homonuclear coupling constants

A set of 4D NMR experiments of enhanced resolution for easy resonance assignment in proteins.

Accelerating diffusion-ordered NMR spectroscopy by joint sparse sampling of diffusion and time dimensions

Amino acid recognition for automatic resonance assignment of intrinsically disordered proteins

An experimental test of C-N bond twisting in the TICT state: syn-anti photoisomerization in 2-(N-methyl-N-isopropylamino)-5-cyanopyridine.

Analysis of complex reacting mixtures by time-resolved 2D NMR

Applications of high dimensionality experiments to biomolecular NMR.

Artifacts in time-resolved NUS: A case study of NOE build-up curves from 2D NOESY.

Backbone and partial side chain assignment of the microtubule binding domain of the MAP1B light chain

Biochemical and Structural Characterization of the Interaction between the Siderocalin NGAL/LCN2 (Neutrophil Gelatinase-associated Lipocalin/Lipocalin 2) and the N-terminal Domain of Its Endocytic Receptor SLC22A17.

Biosynthetic engineered B28(K)-B29(P) human insulin monomer structure in water and in water/acetonitrile solutions

C4'/H4' selective, non-uniformly sampled 4D HC(P)CH experiment for sequential assignments of (13)C-labeled RNAs.

Complete1H and13C signal assignment of prenol-10 with 3D NMR spectroscopy

Conformational Equilibrium of Cinchonidine in CD Solution. Alternative NMR/DFT Approach

Crystal and electronic structure, lattice dynamics and thermal properties of Ag(I)(SO3)R (R = F, CF3) Lewis acids in the solid state

Determination of heteronuclear coupling constants from 3D HSQC-TOCSY experiment with optimized random sampling of evolution time space

Determination of spin-spin couplings from ultrahigh resolution 3D NMR spectra obtained by optimized random sampling and multidimensional Fourier transformation

Direct insight into insulin aggregation by 2D NMR complemented by PFGSE NMR.

Efficient compensation of low-frequency magnetic field disturbances in NMR with fluxgate sensors.

Experimental and Computational Studies on Structure and Energetic Properties of Halogen Derivatives of 2-Deoxy-D-Glucose

Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein

Generalized Fourier transform for non-uniform sampled data.

High dimensional and high resolution pulse sequences for backbone resonance assignment of intrinsically disordered proteins

High resolution 4D HPCH experiment for sequential assignment of (13)C-labeled RNAs via phosphodiester backbone

High-dimensional NMR methods for intrinsically disordered proteins studies

High-dimensional NMR spectra for structural studies of biomolecules

High-dimensionality 13C direct-detected NMR experiments for the automatic assignment of intrinsically disordered proteins.

Insight into human insulin aggregation revisited using NMR derived translational diffusion parameters

Insights from impedance spectroscopy into the mechanism of thermal decomposition of M(NH2BH3), M = H, Li, Na, Li(0.5)Na(0.5), hydrogen stores

Is There Any Proton Exchange Between Ammonium Ions localized Within the d(G3T4G4)2 Quadruplex?

Iterative algorithm of discrete Fourier transform for processing randomly sampled NMR data sets

Iterative thresholding algorithm for multiexponential decay applied to PGSE NMR data.

J(F,H), J(C,H) and J(H,H) couplings involving the individual methyl group protons in 1,2,3,4-tetrachloro-5,6,7,8-tetrafluoro-9-methyltriptycene. Evidence of blue-shifting hydrogen bond.

Joint non-uniform sampling of all incremented time delays for quicker acquisition in protein relaxation studies.

Lineshapes and artifacts in Multidimensional Fourier Transform of arbitrary sampled NMR data sets.

Metal Exchange in the Interprotein ZnII -Binding Site of the Rad50 Hook Domain: Structural Insights into CdII -Induced DNA-Repair Inhibition

Metal-coupled folding as the driving force for the extreme stability of Rad50 zinc hook dimer assembly

Multiple quadrature detection in reduced dimensionality experiments

NMR studies of chiral recognition by cyclodextrins

Narrow peaks and high dimensionalities: exploiting the advantages of random sampling.

Non-uniform frequency domain for optimal exploitation of non-uniform sampling.

Novel Cyclic Biphalin Analogues by Ruthenium-Catalyzed Ring Closing Metathesis: in Vivo and in Vitro Biological Profile

Nuclear overhauser spectroscopy of chiral CHD methylene groups

On the impossibility of determination of stepwise binding constants for the 1 : 2 complex of (+)-camphor with alpha-cyclodextrin.

Optimization of random time domain sampling in multidimensional NMR

Peptides and peptidoaldehydes as substrates for the Pictet-Spengler reaction

Phase transition induced improvement in H2 desorption kinetics: the case of the high-temperature form of Y(BH4)3.

Probing Local Backbone Geometries in Intrinsically Disordered Proteins by Cross-Correlated NMR Relaxation

Probing local backbone geometries in intrinsically disordered proteins by cross-correlated NMR relaxation

Protonation-dependent conformational variability of intrinsically disordered proteins.

Pure-Phase Homo- and Heteronuclear J Spectra with Tilted Cross Peaks for an Accurate Determination of Coupling Constants

Random sampling in multidimensional NMR spectroscopy.

Random sampling of evolution time space and Fourier transform processing

Reconstruction of non-uniformly sampled five-dimensional NMR spectra by signal separation algorithm

Selective diagonal-free (13)C, (13)C-edited aliphatic-aromatic NOESY experiment with non-uniform sampling

Sensitivity improvement and new acquisition scheme of heteronuclear active-coupling-pattern-tilting spectroscopy

Simplified multiplet pattern HSQC-TOCSY experiment for accurate determination of long-range heteronuclear coupling constants

Six- and seven-dimensional experiments by combination of sparse random sampling and projection spectroscopy dedicated for backbone resonance assignment of intrinsically disordered proteins

Spatial structure and NMR spectra of strained [2.2.2]cyclophanes

Speeding up sequence specific assignment of IDPs

Strategy for complete NMR assignment of disordered proteins with highly repetitive sequences based on resolution-enhanced 5D experiments

Structural analysis of 25-hydroxycholesterol stereoisomers differing in configuration in position 17 and 20, by three-dimensional NMR spectra

Structure and Dynamics of the Huntingtin Exon-1 N-Terminus: A Solution NMR Perspective

Structure and dynamics of Helicobacter pylori nickel-chaperone HypA: an integrated approach using NMR spectroscopy, functional assays and computational tools

Study of near-symmetric cyclodextrins by compressed sensing 2D NMR.

Suppression of sampling artefacts in high-resolution four-dimensional NMR spectra using signal separation algorithm

Synthesis of rigid tryptophan mimetics by the diastereoselective Pictet-Spengler reaction of β³-homo-tryptophan derivatives with chiral α-amino aldehydes

TSAR: a program for automatic resonance assignment using 2D cross-sections of high dimensionality, high-resolution spectra