List of works - Alexander Loy

Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment

scientific article published on October 2002

Barcoded primers used in multiplex amplicon pyrosequencing bias amplification

scientific article

probeBase--an online resource for rRNA-targeted oligonucleotide probes: new features 2007.

scientific article

amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions

scientific article

Temporal bacterial community dynamics vary among ulcerative colitis patients after fecal microbiota transplantation.

scientific article published on 24 September 2013

Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

scientific article

Bacterial community composition and function in sewage treatment systems

scientific article

probeBase: an online resource for rRNA-targeted oligonucleotide probes

scientific article

Microbial community composition and function in wastewater treatment plants

scientific article

Sulfate-reducing microorganisms in wetlands - fameless actors in carbon cycling and climate change

scientific article (publication date: 2012)

Phylotype-level 16S rRNA analysis reveals new bacterial indicators of health state in acute murine colitis

scientific article

New insights into metabolic properties of marine bacteria encoding proteorhodopsins

scientific article

probeCheck--a central resource for evaluating oligonucleotide probe coverage and specificity

scientific article

A 'rare biosphere' microorganism contributes to sulfate reduction in a peatland

scientific article published on 10 June 2010

A constant flux of diverse thermophilic bacteria into the cold Arctic seabed

scientific article

16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order "Rhodocyclales"

scientific article

Microarray and functional gene analyses of sulfate-reducing prokaryotes in low-sulfate, acidic fens reveal cooccurrence of recognized genera and novel lineages

scientific article published on December 2004

Phylogenetic and environmental diversity of DsrAB-type dissimilatory (bi)sulfite reductases

scientific article

Host-compound foraging by intestinal microbiota revealed by single-cell stable isotope probing

scientific article published on 4 March 2013

Diversity and abundance of sulfate-reducing microorganisms in the sulfate and methane zones of a marine sediment, Black Sea.

scientific article published in January 2007

Non-sulfate-reducing, syntrophic bacteria affiliated with desulfotomaculum cluster I are widely distributed in methanogenic environments

scientific article

Longitudinal study of murine microbiota activity and interactions with the host during acute inflammation and recovery

scientific article published on 09 January 2014

Lateral gene transfer of dissimilatory (bi)sulfite reductase revisited

scientific article

Linking microbial community structure with function: fluorescence in situ hybridization-microautoradiography and isotope arrays

scientific article

Highly parallel microbial diagnostics using oligonucleotide microarrays.

scientific article

Genome-guided design of a defined mouse microbiota that confers colonization resistance against Salmonella enterica serovar Typhimurium

scientific article

Diversity of sulfate-reducing bacteria from an extreme hypersaline sediment, Great Salt Lake (Utah).

scientific article

NxrB encoding the beta subunit of nitrite oxidoreductase as functional and phylogenetic marker for nitrite-oxidizing Nitrospira.

scientific article

Reverse dissimilatory sulfite reductase as phylogenetic marker for a subgroup of sulfur-oxidizing prokaryotes

scientific article published on 26 September 2008

Environmental Enteric Dysfunction and Growth Failure/Stunting in Global Child Health.

scientific article

Endospores of thermophilic bacteria as tracers of microbial dispersal by ocean currents

scientific article

Functionally relevant diversity of closely related Nitrospira in activated sludge.

scientific article

Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle

scientific article published on 21 February 2018

Colonization resistance and microbial ecophysiology: using gnotobiotic mouse models and single-cell technology to explore the intestinal jungle

scientific article published on June 5, 2013

The life sulfuric: microbial ecology of sulfur cycling in marine sediments

scientific article

A flexible and economical barcoding approach for highly multiplexed amplicon sequencing of diverse target genes

scientific article published on 16 July 2015

Functional marker genes for identification of sulfate-reducing prokaryotes

scientific article published in January 2005

Consortia of low-abundance bacteria drive sulfate reduction-dependent degradation of fermentation products in peat soil microcosms

scientific article

probeBase--an online resource for rRNA-targeted oligonucleotide probes and primers: new features 2016

scientific article

Diversity of bacteria growing in natural mineral water after bottling

scientific article published in July 2005

Improved 16S rRNA-targeted probe set for analysis of sulfate-reducing bacteria by fluorescence in situ hybridization.

scientific article published on 28 February 2007

Dispersal of thermophilic Desulfotomaculum endospores into Baltic Sea sediments over thousands of years

scientific article

Phylogenetic and genomic analysis of Methanomassiliicoccales in wetlands and animal intestinal tracts reveals clade-specific habitat preferences

scientific article published on 26 November 2015

Paracatenula, an ancient symbiosis between thiotrophic Alphaproteobacteria and catenulid flatworms

scientific article (publication date: 19 July 2011)

Thermophilic anaerobes in Arctic marine sediments induced to mineralize complex organic matter at high temperature

scientific article

Lifestyle and Horizontal Gene Transfer-Mediated Evolution of Mucispirillum schaedleri, a Core Member of the Murine Gut Microbiota.

scientific article published on 31 January 2017

Unravelling microbial communities with DNA-microarrays: challenges and future directions

scientific article

Intestinal Microbiota Signatures Associated with Inflammation History in Mice Experiencing Recurring Colitis

scientific article

Isotope array analysis of Rhodocyclales uncovers functional redundancy and versatility in an activated sludge

scientific article published on 2 July 2009

Multiple bacterial symbionts in two species of co-occurring gutless oligochaete worms from Mediterranean sea grass sediments.

scientific article

List of works by Alexander Loy

Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment

Barcoded primers used in multiplex amplicon pyrosequencing bias amplification

probeBase--an online resource for rRNA-targeted oligonucleotide probes: new features 2007.

amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions

Temporal bacterial community dynamics vary among ulcerative colitis patients after fecal microbiota transplantation.

Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

Bacterial community composition and function in sewage treatment systems

probeBase: an online resource for rRNA-targeted oligonucleotide probes

Microbial community composition and function in wastewater treatment plants

Sulfate-reducing microorganisms in wetlands - fameless actors in carbon cycling and climate change

Phylotype-level 16S rRNA analysis reveals new bacterial indicators of health state in acute murine colitis

New insights into metabolic properties of marine bacteria encoding proteorhodopsins

probeCheck--a central resource for evaluating oligonucleotide probe coverage and specificity

A 'rare biosphere' microorganism contributes to sulfate reduction in a peatland

A constant flux of diverse thermophilic bacteria into the cold Arctic seabed

16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order "Rhodocyclales"

Microarray and functional gene analyses of sulfate-reducing prokaryotes in low-sulfate, acidic fens reveal cooccurrence of recognized genera and novel lineages

Phylogenetic and environmental diversity of DsrAB-type dissimilatory (bi)sulfite reductases

Host-compound foraging by intestinal microbiota revealed by single-cell stable isotope probing

Diversity and abundance of sulfate-reducing microorganisms in the sulfate and methane zones of a marine sediment, Black Sea.

Non-sulfate-reducing, syntrophic bacteria affiliated with desulfotomaculum cluster I are widely distributed in methanogenic environments

Longitudinal study of murine microbiota activity and interactions with the host during acute inflammation and recovery

Lateral gene transfer of dissimilatory (bi)sulfite reductase revisited

Linking microbial community structure with function: fluorescence in situ hybridization-microautoradiography and isotope arrays

Highly parallel microbial diagnostics using oligonucleotide microarrays.

Genome-guided design of a defined mouse microbiota that confers colonization resistance against Salmonella enterica serovar Typhimurium

Diversity of sulfate-reducing bacteria from an extreme hypersaline sediment, Great Salt Lake (Utah).

NxrB encoding the beta subunit of nitrite oxidoreductase as functional and phylogenetic marker for nitrite-oxidizing Nitrospira.

Reverse dissimilatory sulfite reductase as phylogenetic marker for a subgroup of sulfur-oxidizing prokaryotes

Environmental Enteric Dysfunction and Growth Failure/Stunting in Global Child Health.

Endospores of thermophilic bacteria as tracers of microbial dispersal by ocean currents

Functionally relevant diversity of closely related Nitrospira in activated sludge.

Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle

Colonization resistance and microbial ecophysiology: using gnotobiotic mouse models and single-cell technology to explore the intestinal jungle

The life sulfuric: microbial ecology of sulfur cycling in marine sediments

A flexible and economical barcoding approach for highly multiplexed amplicon sequencing of diverse target genes

Functional marker genes for identification of sulfate-reducing prokaryotes

Consortia of low-abundance bacteria drive sulfate reduction-dependent degradation of fermentation products in peat soil microcosms

probeBase--an online resource for rRNA-targeted oligonucleotide probes and primers: new features 2016

Diversity of bacteria growing in natural mineral water after bottling

Improved 16S rRNA-targeted probe set for analysis of sulfate-reducing bacteria by fluorescence in situ hybridization.

Dispersal of thermophilic Desulfotomaculum endospores into Baltic Sea sediments over thousands of years

Phylogenetic and genomic analysis of Methanomassiliicoccales in wetlands and animal intestinal tracts reveals clade-specific habitat preferences

Paracatenula, an ancient symbiosis between thiotrophic Alphaproteobacteria and catenulid flatworms

Thermophilic anaerobes in Arctic marine sediments induced to mineralize complex organic matter at high temperature

Lifestyle and Horizontal Gene Transfer-Mediated Evolution of Mucispirillum schaedleri, a Core Member of the Murine Gut Microbiota.

Unravelling microbial communities with DNA-microarrays: challenges and future directions

Intestinal Microbiota Signatures Associated with Inflammation History in Mice Experiencing Recurring Colitis

Isotope array analysis of Rhodocyclales uncovers functional redundancy and versatility in an activated sludge

Multiple bacterial symbionts in two species of co-occurring gutless oligochaete worms from Mediterranean sea grass sediments.