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List of works by Ludmila Chistoserdova

A Synthetic Ecology Perspective: How Well Does Behavior of Model Organisms in the Laboratory Predict Microbial Activities in Natural Habitats?

scientific article published on 15 June 2016

A genomic view of methane oxidation by aerobic bacteria and anaerobic archaea

scientific article

A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between the Methylococcaceae and the Methylophilaceae

scientific article published on 19 February 2013

A methenyl tetrahydromethanopterin cyclohydrolase and a methenyl tetrahydrofolate cyclohydrolase in Methylobacterium extorquens AM1.

scientific article

Aerobic Methylotrophic Prokaryotes

scientific article published in 2013

Alternative route for glyoxylate consumption during growth on two-carbon compounds by Methylobacterium extorquens AM1.

scientific article published on 29 January 2010

An integrated proteomics/transcriptomics approach points to oxygen as the main electron sink for methanol metabolism in Methylotenera mobilis

scientific article

Analysis of fae and fhcD genes in Mono Lake, California

scientific article

Analysis of gene islands involved in methanopterin-linked C1 transfer reactions reveals new functions and provides evolutionary insights

scientific article

Application of Omics Approaches to Studying Methylotrophs and Methylotroph Comunities

scientific article

Bacterial populations active in metabolism of C1 compounds in the sediment of Lake Washington, a freshwater lake

scientific article

C1 transfer enzymes and coenzymes linking methylotrophic bacteria and methanogenic Archaea

scientific article published in July 1998

Characterization of a novel methanol dehydrogenase in representatives of Burkholderiales: implications for environmental detection of methylotrophy and evidence for convergent evolution

scientific article

Characterization of a second methylene tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1

scientific article published in June 2000

Comment on "A Persistent Oxygen Anomaly Reveals the Fate of Spilled Methane in the Deep Gulf of Mexico"

scientific article published on 26 May 2011

Communal metabolism of methane and the rare Earth element switch

scientific article

Community-level analysis: genes encoding methanopterin-dependent enzymes

scientific article published in January 2005

Comparative transcriptomics in three Methylophilaceae species uncover different strategies for environmental adaptation

scientific article published on 25 July 2013

Complete genome sequences of six strains of the genus Methylobacterium

scientific article

Development and application of polymerase chain reaction primers based on fhcD for environmental detection of methanopterin-linked C1-metabolism in bacteria

scientific article published in August 2005

Draft Genome of Janthinobacterium sp. RA13 Isolated from Lake Washington Sediment

scientific article

Draft Genome of Pseudomonas sp. Strain 11/12A, Isolated from Lake Washington Sediment

scientific article

Draft genome sequences of five new strains of methylophilaceae isolated from lake washington sediment

scientific article

Draft genome sequences of gammaproteobacterial methanotrophs isolated from lake washington sediment

scientific article

Draft genomes of two strains of flavobacterium isolated from lake washington sediment

scientific article

Expressed genome of Methylobacillus flagellatus as defined through comprehensive proteomics and new insights into methylotrophy

scientific article

Fishing for biodiversity: novel methanopterin-linked C transfer genes deduced from the Sargasso Sea metagenome

scientific article published in December 2005

Fluorescence in situ hybridization-flow cytometry-cell sorting-based method for separation and enrichment of type I and type II methanotroph populations

scientific article

Formaldehyde-detoxifying role of the tetrahydromethanopterin-linked pathway in Methylobacterium extorquens AM1.

scientific article

Functional metagenomics of methylotrophs

scientific article published in January 2011

Functioning in situ: gene expression in Methylotenera mobilis in its native environment as assessed through transcriptomics

scientific article published on 19 November 2009

Genome of Methylobacillus flagellatus, molecular basis for obligate methylotrophy, and polyphyletic origin of methylotrophy

scientific article published on 6 April 2007

Genomes of three methylotrophs from a single niche reveal the genetic and metabolic divergence of the methylophilaceae

scientific article

Genomics of Methylotrophy in Gram-Positive Methylamine-Utilizing Bacteria

scientific article published on 20 March 2015

Glyoxylate regeneration pathway in the methylotroph Methylobacterium extorquens AM1

scientific article

High-Resolution Metagenomics: Assessing Specific Functional Types in Complex Microbial Communities

scientific article published on 3 May 2011

High-resolution metagenomics targets specific functional types in complex microbial communities

scientific article published in September 2008

Highly divergent genes for methanopterin-linked C1 transfer reactions in Lake Washington, assessed via metagenomic analysis and mRNA detection

scientific article

Identification of a fourth formate dehydrogenase in Methylobacterium extorquens AM1 and confirmation of the essential role of formate oxidation in methylotrophy.

scientific article published on 05 October 2007

Identification of genes involved in the glyoxylate regeneration cycle in Methylobacterium extorquens AM1, including two new genes, meaC and meaD

scientific article

Insights into denitrification in Methylotenera mobilis from denitrification pathway and methanol metabolism mutants

scientific article published on 8 March 2013

Insights into the physiology of Methylotenera mobilis as revealed by metagenome-based shotgun proteomic analysis

scientific article

Is metagenomics resolving identification of functions in microbial communities? ⬇️

scientific article published on August 15, 2013

Labrys methylaminiphilus sp. nov., a novel facultatively methylotrophic bacterium from a freshwater lake sediment

scientific article

Lanthanide-dependent cross-feeding of methane-derived carbon is linked by microbial community interactions.

scientific article published on 27 December 2016

Lanthanides: New life metals?

scientific article published on 29 June 2016

Methane-fed microbial microcosms show differential community dynamics and pinpoint taxa involved in communal response

scientific article published on 21 October 2014

Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources

scientific article published on 18 May 2009

Methylophilaceae link methanol oxidation to denitrification in freshwater lake sediment as suggested by stable isotope probing and pure culture analysis

scientific article

Methylosarcina lacus sp. nov., a methanotroph from Lake Washington, Seattle, USA, and emended description of the genus Methylosarcina

scientific article

Methylotenera mobilis gen. nov., sp. nov., an obligately methylamine-utilizing bacterium within the family Methylophilaceae

scientific article

Methylotrophs in natural habitats: current insights through metagenomics

scientific article published on 9 June 2015

Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view

scientific article

Methylotrophy in a Lake: from Metagenomics to Single-Organism Physiology ⬇️

scientific article published on May 27, 2011

Methyloversatilis universalis gen. nov., sp. nov., a novel taxon within the Betaproteobacteria represented by three methylotrophic isolates

scientific article published in November 2006

Modularity of methylotrophy, revisited ⬇️

scientific article published on March 28, 2011

MtdC, a novel class of methylene tetrahydromethanopterin dehydrogenases

scientific article

Multiphyletic origins of methylotrophy in Alphaproteobacteria, exemplified by comparative genomics of Lake Washington isolates

scientific article

Multiple formaldehyde oxidation/detoxification pathways in Burkholderia fungorum LB400.

scientific article published on April 2004

Multiple formate dehydrogenase enzymes in the facultative methylotroph Methylobacterium extorquens AM1 are dispensable for growth on methanol

scientific article

New pieces to the lanthanide puzzle

scientific article published on 28 March 2019

Novel dephosphotetrahydromethanopterin biosynthesis genes discovered via mutagenesis in Methylobacterium extorquens AM1.

scientific article published on April 2005

Novel methylotrophic isolates from lake sediment, description of Methylotenera versatilis sp. nov. and emended description of the genus Methylotenera

scientific article

Oxygen availability is a major factor in determining the composition of microbial communities involved in methane oxidation

scientific article

Plants in the pink: cytokinin production by methylobacterium

scientific article

Poly-beta-hydroxybutyrate biosynthesis in the facultative methylotroph methylobacterium extorquens AM1: identification and mutation of gap11, gap20, and phaR

scientific article

Real-time detection of actively metabolizing microbes by redox sensing as applied to methylotroph populations in Lake Washington

scientific article published on 27 March 2008

Recent progress and new challenges in metagenomics for biotechnology

scientific article published on 21 May 2010

Respiration response imaging for real-time detection of microbial function at the single-cell level.

scientific article

The Distribution and Evolution of C1 Transfer Enzymes and Evolution of the Planctomycetes

scientific article published in 2013

The enigmatic planctomycetes may hold a key to the origins of methanogenesis and methylotrophy

scientific article

The expanded diversity of methylophilaceae from Lake Washington through cultivation and genomic sequencing of novel ecotypes

scientific article

The expanding world of methylotrophic metabolism

scientific article published on January 2009

The tungsten-containing formate dehydrogenase from Methylobacterium extorquens AM1: purification and properties.

scientific article published in January 2003

Wide Distribution of Genes for Tetrahydromethanopterin/Methanofuran-Linked C1 Transfer Reactions Argues for Their Presence in the Common Ancestor of Bacteria and Archaea

scientific article

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