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List of works by José-Antonio Daròs

A 451-nucleotide circular RNA from cherry with hammerhead ribozymes in its strands of both polarities.

scientific article

A Recombinant Potato virus Y Infectious Clone Tagged with the Rosea1 Visual Marker (PVY-Ros1) Facilitates the Analysis of Viral Infectivity and Allows the Production of Large Amounts of Anthocyanins in Plants.

scientific article published on 6 April 2017

A chloroplast protein binds a viroid RNA in vivo and facilitates its hammerhead-mediated self-cleavage

scientific article

A chloroplastic RNA ligase activity analogous to the bacterial and archaeal 2´-5' RNA ligase.

scientific article published in March 2012

A general strategy for cloning viroids and other small circular RNAs that uses minimal amounts of template and does not require prior knowledge of its sequence

scientific article published on 01 January 1996

A group I plant intron accumulates as circular RNA forms with extensive 5' deletions in vivo

scientific article published on September 1996

A potyvirus vector efficiently targets recombinant proteins to chloroplasts, mitochondria and nuclei in plant cells when expressed at the amino terminus of the polyprotein.

scientific article published on 6 July 2015

A real-time RT-PCR assay for quantifying the fitness of tobacco etch virus in competition experiments

scientific article published on 7 November 2006

A set of novel RNAs transcribed from the chloroplast genome accumulates in date palm leaflets affected by brittle leaf disease

scientific article published in March 2008

A viroid-derived system to produce large amounts of recombinant RNA in Escherichia coli

scientific article published on 30 January 2018

An element of the tertiary structure of Peach latent mosaic viroid RNA revealed by UV irradiation

scientific article published on September 2006

Analysis of viroid replication.

scientific article

Artificial microRNAs and synthetic trans-acting small interfering RNAs interfere with viroid infection.

scientific article

Assessment of protein silver nanoparticles toxicity against pathogenic Alternaria solani.

scientific article published on 21 September 2016

Boolean Computation in Plants Using Post-translational Genetic Control and a Visual Output Signal

scientific article published on 18 September 2018

Characterization of multiple circular RNAs derived from a plant viroid-like RNA by sequence deletions and duplications.

scientific article published on September 1995

Characterization of small RNAs derived from Citrus exocortis viroid (CEVd) in infected tomato plants

scientific article published on 08 June 2007

Close structural relationship between two hammerhead viroid-like RNAs associated with cherry chlorotic rusty spot disease

scientific article

Compensatory molecular evolution of HC-Pro, an RNA-silencing suppressor from a plant RNA virus

scientific article published on 11 November 2009

Complete sequence of three different biotypes of tomato spotted wilt virus (wild type, tomato Sw-5 resistance-breaking and pepper Tsw resistance-breaking) from Spain.

scientific article

Complexes containing both polarity strands of avocado sunblotch viroid: identification in chloroplasts and characterization

scientific article published on 01 January 1999

Diagnosis of "Maladie des feuilles cassantes" or Brittle leaf disease of date palms by detection of associated chloroplast encoded double stranded RNAs

scientific article published on 19 May 2006

Dicer-Like 4 Is Involved in Restricting the Systemic Movement of Zucchini yellow mosaic virus in Nicotiana benthamiana.

scientific article published on 13 December 2016

Direct derivative spectrophotometric determination of nitrazepam and clonazepam in biological fluids

scientific article published in January 1991

Dynamic signal processing by ribozyme-mediated RNA circuits to control gene expression

scientific article published on 27 April 2015

Dynamics of a plant RNA virus intracellular accumulation: stamping machine vs. geometric replication

scientific article published on 21 April 2011

Dynamics of alternative modes of RNA replication for positive-sense RNA viruses

scientific article published on 7 September 2011

Effects of Potyvirus Effective Population Size in Inoculated Leaves on Viral Accumulation and the Onset of Symptoms ⬇️

scientific article published on June 27, 2012

Eggplant latent viroid, the candidate type species for a new genus within the family Avsunviroidae (hammerhead viroids)

scientific article

Eggplant latent viroid: a friendly experimental system in the family Avsunviroidae

scientific article

Evolutionary Constraints to Viroid Evolution ⬇️

scientific article published on September 2, 2009

Existence in vivo of the loop E motif in potato spindle tuber viroid RNA

scientific article published on 19 March 2007

Experimental evolution of pseudogenization and gene loss in a plant RNA virus

scientific article published on 8 October 2013

Exploring the Dynamics and Mutational Landscape of Riboregulation with a Minimal Synthetic Circuit in Living Cells

scientific article

Fast-forward generation of effective artificial small RNAs for enhanced antiviral defense in plants

scientific article published on 12 January 2016

Fate of artificial microRNA-mediated resistance to plant viruses in mixed infections.

scientific article published in August 2013

From hypo- to hypersuppression: effect of amino acid substitutions on the RNA-silencing suppressor activity of the Tobacco etch potyvirus HC-Pro

scientific article published on 9 September 2008

Full design automation of multi-state RNA devices to program gene expression using energy-based optimization

scientific article

Functional analysis of the interaction between VPg-proteinase (NIa) and RNA polymerase (NIb) of tobacco etch potyvirus, using conditional and suppressor mutants.

scientific article

HC-Pro hypo- and hypersuppressor mutants: differences in viral siRNA accumulation in vivo and siRNA binding activity in vitro

scientific article published on 29 November 2009

Hammerhead ribozyme structure and function in plant RNA replication.

scientific article published in January 2001

Harnessed viruses in the age of metagenomics and synthetic biology: an update on infectious clone assembly and biotechnologies of plant viruses

article

Identification in eggplant of a variant of citrus exocortis viroid (CEVd) with a 96 nucleotide duplication in the right terminal region of the rod-like secondary structure.

scientific article

Improving the effectiveness of artificial microRNA (amiR)-mediated resistance against Turnip mosaic virus by combining two amiRs or by targeting highly conserved viral genomic regions.

scientific article published on 22 May 2013

Interaction network of tobacco etch potyvirus NIa protein with the host proteome during infection

scientific article published on February 2016

Intron-assisted, viroid-based production of insecticidal circular double-stranded RNA in <i>Escherichia coli</i>

scientific article published on 20 January 2021

Involvement of the chloroplastic isoform of tRNA ligase in the replication of viroids belonging to the family Avsunviroidae.

scientific article published on 23 May 2012

Luria-delbruck estimation of turnip mosaic virus mutation rate in vivo

scientific article published on 11 January 2012

Mechanisms of genetic robustness in RNA viruses

scientific article

Model-based design of RNA hybridization networks implemented in living cells.

scientific article published in September 2017

Molecular signatures of silencing suppression degeneracy from a complex RNA virus

scientific article published on 28 June 2021

Monomeric linear RNA of citrus exocortis viroid resulting from processing in vivo has 5'-phosphomonoester and 3'-hydroxyl termini: implications for the RNase and RNA ligase involved in replication.

scientific article published on 13 August 2008

Multi-targeting of viral RNAs with synthetic trans-acting small interfering RNAs enhances plant antiviral resistance

scientific article published on 16 September 2019

Multiple Barriers to the Evolution of Alternative Gene Orders in a Positive-Strand RNA Virus

scientific article published on 11 February 2016

Mutational analysis of eggplant latent viroid RNA processing in Chlamydomonas reinhardtii chloroplast

scientific article published on 12 August 2009

One Is Enough: In Vivo Effective Population Size Is Dose-Dependent for a Plant RNA Virus ⬇️

scientific article published on July 7, 2011

One-step site-directed mutagenesis of viroid dimeric cDNA

scientific article published on 29 June 2007

Processing of RNAs of the family Avsunviroidae in Chlamydomonas reinhardtii chloroplasts.

scientific article published on 7 February 2007

Processing of nuclear viroids in vivo: an interplay between RNA conformations.

scientific article

RNA Binding Activity of NIa Proteinase of Tobacco Etch Potyvirus

scientific article published on 01 October 1997

Reassessment of Viroid RNA Cytosine Methylation Status at the Single Nucleotide Level.

scientific article

Reduced Graphene Oxide Nanosheet-Decorated Copper Oxide Nanoparticles: A Potent Antifungal Nanocomposite against Fusarium Root Rot and Wilt Diseases of Tomato and Pepper Plants

scientific article published on 24 May 2020

Relocation of the NIb gene in the tobacco etch potyvirus genome

scientific article

Replication of avocado sunblotch viroid: evidence for a symmetric pathway with two rolling circles and hammerhead ribozyme processing.

scientific article

Reverse transcription polymerase chain reaction protocols for cloning small circular RNAs.

scientific article

Rewiring carotenoid biosynthesis in plants using a viral vector.

scientific article published on 31 January 2017

Ribosomal protein L5 and transcription factor IIIA from Arabidopsis thaliana bind in vitro specifically Potato spindle tuber viroid RNA

scientific article published on 14 December 2010

Secondary Structures in the Capsid Protein Coding Sequence and 3′ Nontranslated Region Involved in Amplification of the Tobacco Etch Virus Genome ⬇️

scientific article published on May 1, 1998

Simultaneous equimolar expression of multiple proteins in plants from a disarmed potyvirus vector

scientific article published on 20 August 2010

Stability and fitness impact of the visually discernible Rosea1 marker in the Tobacco etch virus genome

scientific article published on 9 September 2013

Stability of Tobacco etch virus infectious clones in plasmid vectors

scientific article published on 10 February 2010

Surveys in the Chrysanthemum Production Areas of Brazil and Colombia Reveal That Weeds Are Potential Reservoirs of Chrysanthemum Stunt Viroid.

scientific article published on 17 April 2019

Synthetic conversion of leaf chloroplasts into carotenoid-rich plastids reveals mechanistic basis of natural chromoplast development

scientific article published on 19 August 2020

Tempo and mode of plant RNA virus escape from RNA interference-mediated resistance

scientific article

The DNA of a plant retroviroid-like element is fused to different sites in the genome of a plant pararetrovirus and shows multiple forms with sequence deletions.

scientific article published on November 2000

The Mn-binding proteins of the photosystem II oxygen-evolving complex are decreased in date palms affected by brittle leaf disease

scientific article published on 12 February 2011

The absence of eukaryotic initiation factor eIF(iso)4E affects the systemic spread of a Tobacco etch virus isolate in Arabidopsis thaliana.

scientific article published in April 2013

The fittest versus the flattest: experimental confirmation of the quasispecies effect with subviral pathogens.

scientific article published in December 2006

The strands of both polarities of a small circular RNA from carnation self-cleave in vitro through alternative double- and single-hammerhead structures

scientific article published on December 1992

Tobacco etch virus protein P1 traffics to the nucleolus and associates with the host 60S ribosomal subunits during infection.

scientific article published on 2 July 2014

Ultradeep sequencing analysis of population dynamics of virus escape mutants in RNAi-mediated resistant plants

scientific article published on 15 May 2012

Viral suppressors: Combatting RNA silencing

scientific article published on 19 June 2017

Viroid RNA redirects host DNA ligase 1 to act as an RNA ligase

scientific article

Viroid replication: rolling-circles, enzymes and ribozymes

scientific article

Viroids and viroid-host interactions.

scientific article

Viroids: Non-Coding Circular RNAs Able to Autonomously Replicate and Infect Higher Plants

scientific article published in 2023

Viroids: an Ariadne's thread into the RNA labyrinth

scientific article

Virus-host interactome: Putting the accent on how it changes

scientific article published on 19 December 2016

Visual tracking of plant virus infection and movement using a reporter MYB transcription factor that activates anthocyanin biosynthesis

scientific article published on 11 January 2012

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