List of works - Vishal Koparde

3d interaction homology: The structurally known rotamers of tyrosine derive from a surprisingly limited set of information-rich hydropathic interaction environments described by maps.

scientific article

Applying an Empirical Hydropathic Forcefield in Refinement May Improve Low-Resolution Protein X-Ray Crystal Structures ⬇️

scientific article published on January 5, 2011

BOTUX: bayesian-like operational taxonomic unit examiner.

scientific article

Comparison of Lactobacillus crispatus isolates from Lactobacillus-dominated vaginal microbiomes with isolates from microbiomes containing bacterial vaginosis-associated bacteria.

scientific article published on 8 January 2016

Dynamical System Modeling to Simulate Donor T Cell Response to Whole Exome Sequencing-Derived Recipient Peptides Demonstrates Different Alloreactivity Potential in HLA-Matched and -Mismatched Donor-Recipient Pairs.

scientific article published on 11 December 2015

Dynamical system modeling to simulate donor T cell response to whole exome sequencing-derived recipient peptides: Understanding randomness in alloreactivity incidence following stem cell transplantation.

scientific article published in December 2017

Genomic comparison of Trypanosoma conorhini and Trypanosoma rangeli to Trypanosoma cruzi strains of high and low virulence

scientific article published on 24 October 2018

Identification of a gene in Mycoplasma hominis associated with preterm birth and microbial burden in intraamniotic infection

scientific article published on 28 January 2015

In silico Derivation of HLA-Specific Alloreactivity Potential from Whole Exome Sequencing of Stem-Cell Transplant Donors and Recipients: Understanding the Quantitative Immunobiology of Allogeneic Transplantation

scientific article

Molecular dynamics simulation of titanium dioxide nanoparticle sintering

scientific article published in December 2005

Phase transformations during sintering of titania nanoparticles

scientific article published on 01 August 2008

Racioethnic diversity in the dynamics of the vaginal microbiome during pregnancy

scientific article published on 29 May 2019

Sequence homology between HLA-bound cytomegalovirus and human peptides: A potential trigger for alloreactivity

scientific article published on 11 August 2017

Stem cell transplantation as a dynamical system: are clinical outcomes deterministic?

scientific article

The vaginal microbiome and preterm birth

scientific article published on 29 May 2019

Whole exome sequencing to estimate alloreactivity potential between donors and recipients in stem cell transplantation

scientific article

List of works by Vishal Koparde

3d interaction homology: The structurally known rotamers of tyrosine derive from a surprisingly limited set of information-rich hydropathic interaction environments described by maps.

Applying an Empirical Hydropathic Forcefield in Refinement May Improve Low-Resolution Protein X-Ray Crystal Structures ⬇️

BOTUX: bayesian-like operational taxonomic unit examiner.

Comparison of Lactobacillus crispatus isolates from Lactobacillus-dominated vaginal microbiomes with isolates from microbiomes containing bacterial vaginosis-associated bacteria.

Dynamical System Modeling to Simulate Donor T Cell Response to Whole Exome Sequencing-Derived Recipient Peptides Demonstrates Different Alloreactivity Potential in HLA-Matched and -Mismatched Donor-Recipient Pairs.

Dynamical system modeling to simulate donor T cell response to whole exome sequencing-derived recipient peptides: Understanding randomness in alloreactivity incidence following stem cell transplantation.

Genomic comparison of Trypanosoma conorhini and Trypanosoma rangeli to Trypanosoma cruzi strains of high and low virulence

Identification of a gene in Mycoplasma hominis associated with preterm birth and microbial burden in intraamniotic infection

In silico Derivation of HLA-Specific Alloreactivity Potential from Whole Exome Sequencing of Stem-Cell Transplant Donors and Recipients: Understanding the Quantitative Immunobiology of Allogeneic Transplantation

Molecular dynamics simulation of titanium dioxide nanoparticle sintering

Phase transformations during sintering of titania nanoparticles

Racioethnic diversity in the dynamics of the vaginal microbiome during pregnancy

Sequence homology between HLA-bound cytomegalovirus and human peptides: A potential trigger for alloreactivity

Stem cell transplantation as a dynamical system: are clinical outcomes deterministic?

The vaginal microbiome and preterm birth

Whole exome sequencing to estimate alloreactivity potential between donors and recipients in stem cell transplantation