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List of works by Takafumi N Yamaguchi

A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing.

scientific article

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detection

scientific article published on 06 November 2018

Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection

scientific article published on 18 May 2015

Cribriform and intraductal prostate cancer are associated with increased genomic instability and distinct genomic alterations.

scientific article published on 2 January 2018

Exploring genetic suppression interactions on a global scale

scientific article

Genome-wide germline correlates of the epigenetic landscape of prostate cancer

scientific article published on 07 October 2019

Genomic hallmarks of localized, non-indolent prostate cancer.

scientific article published on 9 January 2017

Germline BRCA2 mutations drive prostate cancers with distinct evolutionary trajectories.

scientific article published on 09 January 2017

Germline contamination and leakage in whole genome somatic single nucleotide variant detection.

scientific article published on 31 January 2018

Molecular Evolution of Early-Onset Prostate Cancer Identifies Molecular Risk Markers and Clinical Trajectories

scientific article published on 01 December 2018

Molecular landmarks of tumor hypoxia across cancer types

scientific article published on 14 January 2019

Noncoding mutations target cis-regulatory elements of the FOXA1 plexus in prostate cancer

scientific article published on 23 January 2020

TMPRSS2-ERG fusion co-opts master transcription factors and activates NOTCH signaling in primary prostate cancer.

scientific article published on 07 August 2017

The Evolutionary Landscape of Localized Prostate Cancers Drives Clinical Aggression

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