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List of works by Ionas Erb

Alignathon: a competitive assessment of whole-genome alignment methods

scientific article

BlastR--fast and accurate database searches for non-coding RNAs

scientific article

Combined Treatment With Environmental Enrichment and (-)-Epigallocatechin-3-Gallate Ameliorates Learning Deficits and Hippocampal Alterations in a Mouse Model of Down Syndrome

scientific article published on September 2016

Efficient and interpretable prediction of protein functional classes by correspondence analysis and compact set relations

scientific article

Extinction and reinstatement of an operant responding maintained by food in different models of obesity

scientific article published on 28 December 2017

Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx

scientific article

Fast and accurate large multiple sequence alignments using root-to-leave regressive computation:

Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes

scientific article

Genome-wide expression profiling, in vivo DNA binding analysis, and probabilistic motif prediction reveal novel Abf1 target genes during fermentation, respiration, and sporulation in yeast

scientific article published on 27 February 2008

How should we measure proportionality on relative gene expression data?

scientific article

Impaired development of neocortical circuits contributes to the neurological alterations in DYRK1A haploinsufficiency syndrome

scientific article published on 01 March 2019

Large multiple sequence alignments with a root-to-leaf regressive method

scientific article published on 02 December 2019

MotEvo: integrated Bayesian probabilistic methods for inferring regulatory sites and motifs on multiple alignments of DNA sequences

scientific article published in February 2012

Multiple sequence alignment modeling: methods and applications

scientific article

Pergola-web: a web server for the visualization and analysis of longitudinal behavioral data using repurposed genomics tools and standards

scientific article published on 01 July 2019

Pergola: Boosting Visualization and Analysis of Longitudinal Data by Unlocking Genomic Analysis Tools

scholarly article published 26 October 2018

Principal Component Analysis of the Effects of Environmental Enrichment and (-)-epigallocatechin-3-gallate on Age-Associated Learning Deficits in a Mouse Model of Down Syndrome

scientific article

Protocol for Measuring Compulsive-like Feeding Behavior in Mice

publication published on 20 July 2019

SwissRegulon: a database of genome-wide annotations of regulatory sites

scientific article published on 27 November 2006

T-Coffee: Tree-based consistency objective function for alignment evaluation

scientific article published in January 2014

The functional importance of telomere clustering: global changes in gene expression result from SIR factor dispersion

scientific article published on 29 January 2009

Third Report on Chicken Genes and Chromosomes 2015.

scientific article published on 14 July 2015

Time-course and dynamics of obesity-related behavioral changes induced by energy-dense foods in mice.

scientific article published on 10 January 2018

Transcription Factor Binding Site Positioning in Yeast: Proximal Promoter Motifs Characterize TATA-Less Promoters ⬇️

scientific article published on September 9, 2011

Understanding sequencing data as compositions: an outlook and review.

scientific article published on 28 March 2018

Use of ChIP-Seq data for the design of a multiple promoter-alignment method

scientific article

Using the T-Coffee package to build multiple sequence alignments of protein, RNA, DNA sequences and 3D structures

scientific article published on November 2011

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