Search filters

List of works by Chaochun Wei

A powerful HUPAN on a pan-genome study: significance and perspectives

scientific article published on 01 February 2020

Analysis of oral microbiota in children with dental caries by PCR-DGGE and barcoded pyrosequencing.

scientific article

CDKAM: a taxonomic classification tool using discriminative k-mers and approximate matching strategies

scientific article published on 20 October 2020

Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions

scientific article

Discovery and characterization of the evolution, variation and functions of diversity-generating retroelements using thousands of genomes and metagenomes

scientific article published on 19 July 2019

Dosage compensation in the process of inactivation/reactivation during both germ cell development and early embryogenesis in mouse

scientific article

Genome-Wide Analysis of the Association of Transposable Elements with Gene Regulation Suggests that Alu Elements Have the Largest Overall Regulatory Impact

scientific article published on 30 April 2018

Genomic variation in 3,010 diverse accessions of Asian cultivated rice.

scientific article published on 25 April 2018

HUPAN: a pan-genome analysis pipeline for human genomes

scientific article published on 31 July 2019

ITFP: an integrated platform of mammalian transcription factors

scientific article published on 19 August 2008

In silico analysis of endogenous siRNAs associated transposable elements and NATs in Schistosoma japonicum reveals their putative roles during reproductive development.

scientific article published on 22 March 2018

Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice

scientific article published on 29 October 2009

LAceP: lysine acetylation site prediction using logistic regression classifiers.

scientific article

Long-read sequencing of 111 rice genomes reveals significantly larger pan-genomes

scientific article published in 2022

MOST+: A de novo motif finding approach combining genomic sequence and heterogeneous genome-wide signatures.

scientific article published on 11 June 2015

MetaBinG2: a fast and accurate metagenomic sequence classification system for samples with many unknown organisms

scientific article published on 22 August 2018

MetaBinG: using GPUs to accelerate metagenomic sequence classification

scientific article

More than 9,000,000 unique genes in human gut bacterial community: estimating gene numbers inside a human body

scientific article

NeSSM: a Next-generation Sequencing Simulator for Metagenomics

scientific article published on 4 October 2013

Novel sequences, structural variations and gene presence variations of Asian cultivated rice.

scientific article

PMRD: a curated database for genes and mutants involved in plant male reproduction

scientific article

PaSS: a sequencing simulator for PacBio sequencing

scientific article published on 21 June 2019

Pairagon+N-SCAN_EST: a model-based gene annotation pipeline

scientific article published on 7 August 2006

RPAN: rice pan-genome browser for ∼3000 rice genomes

scientific article published on 10 December 2016

Revealing Missing Human Protein Isoforms Based on Ab Initio Prediction, RNA-seq and Proteomics

scientific article published on 9 July 2015

The completion of the Mammalian Gene Collection (MGC).

scientific article published on 18 September 2009

The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics

scientific article published in November 2003

Using ESTs to improve the accuracy of de novo gene prediction

scientific article published on 3 July 2006

Widespread of horizontal gene transfer in the human genome

scientific article

cGRNB: a web server for building combinatorial gene regulatory networks through integrated engineering of seed-matching sequence information and gene expression datasets

scientific article

iGepros: an integrated gene and protein annotation server for biological nature exploration

scientific article (publication date: 14 December 2011)

Paulina is supported by:

About Paulina

Help