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List of works by Thomas R. Rogers

A GAS-like gene family in the pathogenic fungus Candida glabrata

scientific article published in August 2001

A cluster of multidrug-resistant Mycobacterium tuberculosis among patients arriving in Europe from the Horn of Africa: a molecular epidemiological study

scientific article

A comparison between amoxycillin/clavulanate and mezlocillin in abdominal surgical prophylaxis

scientific article published in November 1989

A prospective study of fungal biomarkers to improve management of invasive fungal diseases in a mixed specialty critical care unit

scientific article published on 30 March 2017

A randomized trial of ciprofloxacin plus azlocillin versus netilmicin plus azlocillin for the empirical treatment of fever in neutropenic patients

scientific article published in August 1991

A role for TLR4 in Clostridium difficile infection and the recognition of surface layer proteins

scientific article

A snapshot of genetic lineages of Mycobacterium tuberculosis in Ireland over a two-year period, 2010 and 2011.

scientific article published on 17 January 2013

A trial of mezlocillin versus cefuroxime with or without metronidazole for the prevention of wound sepsis after biliary and gastrointestinal surgery

scientific article published in October 1988

An evaluation of empirical antibiotic therapy in febrile neutropenic patients

scientific article

An experience of diphtheria in Westminster

scientific article published in January 1984

Antifungal drug resistance: limited data, dramatic impact?

scientific article

Antifungal drug susceptibility testing. Working Party of the British Society for Antimicrobial chemotherapy

scientific article published on December 1995

Antifungal prophylaxis during treatment for haematological malignancies: are we there yet?

scientific article published on 20 April 2011

Antigen detection in invasive aspergillosis

scientific article published on April 1992

CD3ε Expression Defines Functionally Distinct Subsets of Vδ1 T Cells in Patients With Human Immunodeficiency Virus Infection.

scientific article

Candida albicans stimulates IL-23 release by human dendritic cells and downstream IL-17 secretion by Vδ1 T cells.

scientific article published on 11 May 2015

Candida glabrata STE12 is required for wild-type levels of virulence and nitrogen starvation induced filamentation

scientific article published on 01 November 2003

Candida glabrata Ste11 is involved in adaptation to hypertonic stress, maintenance of wild-type levels of filamentation and plays a role in virulence.

scientific article published in June 2005

Candida glabrata Ste20 is involved in maintaining cell wall integrity and adaptation to hypertonic stress, and is required for wild-type levels of virulence.

scientific article published in May 2004

Characterization of Escherichia coli bloodstream isolates associated with mortality.

scientific article published on 30 October 2015

Combined real-time PCR and galactomannan surveillance improves diagnosis of invasive aspergillosis in high risk patients with haematological malignancies

scientific article published on 11 March 2013

Community acquired pneumonia in elderly people. Current British guidelines need revision

scientific article published on June 1998

Community-acquired pneumonia

scientific article published in May 1999

Comparison of plasmid-mediated quinolone resistance and extended-spectrum β-lactamases in third-generation cephalosporin-resistant Enterobacteriaceae from four Irish hospitals.

scientific article published on 8 September 2011

Comparison of two DNA microarrays for detection of plasmid-mediated antimicrobial resistance and virulence factor genes in clinical isolates of Enterobacteriaceae and non-Enterobacteriaceae

scientific article published on 30 March 2010

Control of an outbreak of nosocomial aspergillosis by laminar air-flow isolation

scientific article published in August 1989

Deep-seated resistance in relapsed paratyphoid fever.

scientific article

Detailed characterization of the first high-level azithromycin-resistant Neisseria gonorrhoeae cases in Ireland

scientific article published on 22 April 2015

Detection and investigation of invasive mould disease

scientific article published on January 2011

Detection of antibodies to common antigens of pathogenic and commensal Neisseria species

scientific article

Detection of blaVIM-2 carbapenemase in Pseudomonas aeruginosa in Ireland

scientific article published on 22 November 2007

Developments in the diagnostic mycology laboratory.

scientific article published on January 1992

Diagnosis of aspergillosis by PCR: Clinical considerations and technical tips

scientific article published on 26 October 2017

Direct interaction studies between Aspergillus fumigatus and human immune cells; what have we learned about pathogenicity and host immunity? ⬇️

scientific article published on December 3, 2012

Disseminated Aspergillus terreus infection arising from cutaneous inoculation treated with caspofungin

scientific article published in December 2003

Draft Genome Sequence of the First Isolate of Extensively Drug-Resistant Mycobacterium tuberculosis in Ireland

scientific article published on 9 October 2014

Draft Genome Sequence of the First Isolate of Extensively Drug-Resistant Mycobacterium tuberculosis in New Zealand

scientific article

Draft Genome Sequences of Three Mycobacterium chimaera Respiratory Isolates.

scientific article

Dynamics of extracellular release of Aspergillus fumigatus DNA and galactomannan during growth in blood and serum.

scientific article published on 24 December 2009

Economic evaluation of voriconazole compared with conventional amphotericin B for the primary treatment of aspergillosis in immunocompromised patients

scientific article

Emergence of persistent Aspergillus terreus colonisation in a child with cystic fibrosis

scientific article

Enhanced Tracking of Nosocomial Transmission of Endemic Sequence Type 22 Methicillin-Resistant Staphylococcus aureus Type IV Isolates among Patients and Environmental Sites by Use of Whole-Genome Sequencing.

scientific article published on 18 November 2015

Epidemiology, diagnosis and treatment of systemic Candida infection in surgical patients under intensive care.

scientific article published on March 1998

Erratum for Abdolrasouli et al., Genomic Context of Azole Resistance Mutations in Aspergillus fumigatus Determined Using Whole-Genome Sequencing

scientific article published on 14 July 2015

Erratum to: Surface layer proteins from virulent Clostridium difficile ribotypes exhibit signatures of positive selection with consequences for innate immune response ⬇️

scientific article published on 12 June 2017

European expert opinion on the management of invasive candidiasis in adults

scientific article published on September 2011

Evaluation of GenoType NTM-DR Assay for Identification of Mycobacterium chimaera

scientific article

Fourteen Draft Genome Sequences for the First Reported Cases of Azithromycin-Resistant Neisseria gonorrhoeae in Ireland.

scientific article published on 8 June 2017

Fungal infections: a survey of laboratory services for diagnosis and treatment

scientific article published on 26 April 1996

Gene expression profiles of human dendritic cells interacting with Aspergillus fumigatus in a bilayer model of the alveolar epithelium/endothelium interface

scientific article

Genomic Context of Azole Resistance Mutations in Aspergillus fumigatus Determined Using Whole-Genome Sequencing

scientific article published on 2 June 2015

Genomic Epidemiology Identifies Azole Resistance Due to TR/L98H in European Causing COVID-19-Associated Pulmonary Aspergillosis

scientific article published on 13 November 2023

Glycopeptide Resistance in Gram-positive Bacteria

scientific article

Guidelines for the investigation of invasive fungal infections in haematological malignancy and solid organ transplantation. British Society for Medical Mycology

scientific article

Hospital-acquired Clostridium difficile diarrhoea and herd immunity

scientific article published in February 1997

INVESTIGATION OF INFECTION IN IMMUNOCOMPROMISED PATIENTS

scientific article published in October 1985

Identification of a novel mutation at the primary dimer interface of GyrA conferring fluoroquinolone resistance in Clostridium difficile.

scientific article published on 3 November 2015

Identification of a novel sequence type of Escherichia coli as the causative agent of pyelonephritis and bloodstream infection

scientific article published on 31 October 2016

Implementing a pharmacist-led sequential antimicrobial therapy strategy: a controlled before-and-after study

scientific article published on 25 January 2011

In-vitro activity of antifungal agents in combination with four quinolones

scientific article published in 1988

Inactivation of transcription factor gene ACE2 in the fungal pathogen Candida glabrata results in hypervirulence

scientific article

Increased risk of diarrhoea caused by Clostridium difficile in elderly patients receiving cefotaxime.

scientific article published on November 1995

Inter-country transfer of triazole-resistant Aspergillus fumigatus on plant bulbs

scientific article published on 29 March 2017

Interactions in vitro between polyenes and imidazoles against yeasts

scientific article

Interferon gamma release assays for the diagnosis of latent TB infection in HIV-infected individuals in a low TB burden country

scientific article

Is it time to stop using chloramphenicol on the eye? Fears are based on only six cases

scientific article published on August 1995

Isoprinosine does not influence the natural history of herpes zoster or postherpetic neuralgia

scientific article published in January 1989

Management of pulmonary aspergillosis in AIDS: an emerging clinical problem

scientific article

Memory Th1 Cells Are Protective in Invasive Staphylococcus aureus Infection.

scientific article published on 5 November 2015

Molecular epidemiology of Mycobacterium abscessus complex isolates in Ireland.

scientific article published on 10 June 2015

Molecular epidemiology of multi- and extensively-drug-resistant Mycobacterium tuberculosis in Ireland, 2001-2014.

scientific article

Multi-centre evaluation of the Etest method for antifungal drug susceptibility testing of Candida spp. and Cryptococcus neoformans. BSAC Working Party on Antifungal Chemotherapy

scientific article

Multicenter comparison of serum and whole-blood specimens for detection of Aspergillus DNA in high-risk hematological patients.

scientific article published on 20 February 2013

Neisseria meningitidis in a primary school

scientific article published on November 1987

Non-specific vaginitis: its diagnosis and treatment

scientific article published in 1981

Nosocomial fungal infection: diagnosis and typing.

scientific article

Pathogen-specific DNA enrichment does not increase sensitivity of PCR for diagnosis of invasive aspergillosis in neutropenic patients

scientific article

Population genomics of the pathogenic yeast Candida tropicalis identifies hybrid isolates in environmental samples

scientific article published on 31 March 2021

Possible Interplay Between Hospital and Community Transmission of a Novel Clostridium Difficile Sequence Type 295 Recognized by Next-Generation Sequencing.

scientific article published on 14 April 2016

Post-influenzal triazole-resistant aspergillosis following allogeneic stem cell transplantation.

scientific article published on 23 March 2018

Prevention of airborne fungal infection in immunocompromised patients

scientific article published in February 1988

Prevention of healthcare-associated invasive aspergillosis during hospital construction/renovation works

scientific article published on 07 January 2019

Prevention of infection during neutropenia.

scientific article published on December 1991

Problems with cytomegalovirus in hospital practice

scientific article published in December 1980

Proteomic Profiling of Serological Responses to Aspergillus fumigatus Antigens in Patients with Invasive Aspergillosis

scientific article published on 14 March 2016

Purification and characterization of a 93 kDa Aspergillus fumigatus antigen with diagnostic potential

scientific article published on 01 November 1996

Quality control limits for fluconazole disk susceptibility tests on Mueller-Hinton agar with glucose and methylene blue.

scientific article

RT-qPCR detection ofAspergillus fumigatusRNAin vitroand in a murine model of invasive aspergillosis utilizing the PAXgene®and Tempus™ RNA stabilization systems ⬇️

scientific article published on January 23, 2012

Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study ⬇️

scientific article

Real-time PCR and quantitative culture for monitoring of experimental Aspergillus fumigatus intracranial infection in neutropenic mice

scientific article

Response of extraintestinal pathogenic Escherichia coli to human serum reveals a protective role for Rcs-regulated exopolysaccharide colanic acid.

scientific article published on 28 October 2013

Response rates to a staged antibiotic regimen in febrile neutropenic patients

scientific article

Retrospective evaluation of a latex agglutination test for diagnosis of invasive aspergillosis in immunocompromised patients

scientific article published on 01 August 1994

Review of influenza-associated pulmonary aspergillosis in ICU patients and proposal for a case definition: an expert opinion

scientific article published on 22 June 2020

Rhinocerebral mucormycosis following bone marrow transplantation

scientific article published on 01 January 1992

Siderophore biosynthesis but not reductive iron assimilation is essential for Aspergillus fumigatus virulence ⬇️

scientific article

Spread of Clostridium difficile among patients receiving non-absorbable antibiotics for gut decontamination.

scientific article

Staphylococcus aureus Colonization: Modulation of Host Immune Response and Impact on Human Vaccine Design.

scientific article published on 08 January 2014

Surface layer proteins from virulent Clostridium difficile ribotypes exhibit signatures of positive selection with consequences for innate immune response ⬇️

scientific article

The Aspergillus fumigatus transcriptional activator CpcA contributes significantly to the virulence of this fungal pathogen

scientific article published on May 2004

The Aspergillus pH-responsive transcription factor PacC regulates virulence.

scientific article published in February 2005

The inhibitory effect of serum on the growth of Torulopsis glabrata

scientific article published in March 1988

The phenotypic relationship of Neisseria polysaccharea to commensal and pathogenic Neisseria spp

scientific article published in August 1989

The temporal dynamics of differential gene expression in Aspergillus fumigatus interacting with human immature dendritic cells in vitro

scientific article

Toxin Immunoassays and Clostridium difficile Infection

scientific article

Transmission of toxoplasmosis by bone marrow transplant associated with Campath-1G

scientific article published on January 1, 1992

Treatment of CAPD-peritonitis due to glycopeptide-resistant Enterococcus faecium with quinupristin/dalfopristin

scientific article

Treatment of zygomycosis: current and new options

scientific article published on January 2008

Tuberculosis incidence in the Irish Traveller population in Ireland from 2002 to 2013.

scientific article published on 12 February 2015

Typhlocolitis associated with Clostridium difficile ribotypes 078 and 110 in neonatal piglets from a commercial Irish pig herd

scientific article published on January 2015

Value of antigen detection in predicting invasive pulmonary aspergillosis

scientific article published in The Lancet

Virulence comparisons of Aspergillus nidulans mutants are confounded by the inflammatory response of p47phox-/- mice.

scientific article

Virus infections complicating bone marrow transplantation

scientific article published on February 1, 1992

Voriconazole for serious fungal infections.

scientific article published on January 2004

Whole-genome sequencing improves discrimination of relapse from reinfection and identifies transmission events among patients with recurrent Clostridium difficile infections.

scientific article published on 26 February 2015

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