List of works by Dimitrios Morikis

1H resonance assignments and secondary structure of the carbon monoxide complex of soybean leghemoglobin determined by homonuclear two-dimensional and three-dimensional NMR spectroscopy

scientific article published on 01 January 1994

A computational model for the evaluation of complement system regulation under homeostasis, disease, and drug intervention.

scientific article published on 6 June 2018

A gain-of-function mutation of Arabidopsis lipid transfer protein 5 disturbs pollen tube tip growth and fertilization

scientific article published on 31 December 2009

A multifaceted study of stigma/style cysteine-rich adhesin (SCA)-like Arabidopsis lipid transfer proteins (LTPs) suggests diversified roles for these LTPs in plant growth and reproduction

scientific article

A novel mechanism of PKA anchoring revealed by solution structures of anchoring complexes

scientific article

A predictive model for HIV type 1 coreceptor selectivity

scientific article published on 30 July 2013

A theoretical view of the C3d:CR2 binding controversy.

scientific article published on 27 November 2014

Alteration of sperm whale myoglobin heme axial ligation by site-directed mutagenesis

scientific article published in October 1990

An evaluation of Poisson-Boltzmann electrostatic free energy calculations through comparison with experimental mutagenesis data.

scientific article

Automated computational framework for the analysis of electrostatic similarities of proteins

scientific article published on 14 January 2011

Complement: structure, functions, evolution, and viral molecular mimicry

scientific article

Compstatin, a peptide inhibitor of complement, exhibits species-specific binding to complement component C3.

scientific article published in January 2003

Computational studies of CXCR1, the receptor of IL-8/CXCL8, using molecular dynamics and electrostatics

scientific article

Conformational analysis of compstatin analogues with molecular dynamics simulations in explicit water

scientific article

Conformational interconversion in compstatin probed with molecular dynamics simulations

scientific article published in October 2003

Conformational interconversion in protein crystals

scientific article published on March 5, 1992

Contribution of specific amino acid changes in penicillin binding protein 1 to amoxicillin resistance in clinical Helicobacter pylori isolates

scientific article published on 18 October 2010

De novo peptide design with C3a receptor agonist and antagonist activities: theoretical predictions and experimental validation

scientific article

Derivation of ligands for the complement C3a receptor from the C-terminus of C5a

scientific article

Design and NMR characterization of active analogues of compstatin containing non-natural amino acids

scientific article published in January 2005

Design of a modified mouse protein with ligand binding properties of its human analog by molecular dynamics simulations: the case of C3 inhibition by compstatin

scientific article

Development of a quasi-dynamic pharmacophore model for anti-complement peptide analogues

scientific article

Electrostatic Similarity Determination Using Multiresolution Analysis

scientific article

Electrostatic clustering and free energy calculations provide a foundation for protein design and optimization.

scientific article published on 08 December 2010

Electrostatic exploration of the C3d-FH4 interaction using a computational alanine scan

scientific article published on 17 June 2011

Electrostatic properties of the structure of the docking and dimerization domain of protein kinase A IIalpha

scientific article

Engineering pre-SUMO4 as efficient substrate of SENP2.

scientific article published on April 2014

Factor H-Inspired Design of Peptide Biomarkers of the Complement C3d Protein

scientific article published on 28 February 2020

Hydration of the partially folded peptide RN-24 studied by multidimensional NMR.

scientific article published on June 1995

Immunophysical exploration of C3d-CR2(CCP1-2) interaction using molecular dynamics and electrostatics

scientific article published on 15 March 2007

Influence of electrostatics on the complement regulatory functions of Kaposica, the complement inhibitor of Kaposi's sarcoma-associated herpesvirus.

scientific article published on 20 January 2010

Insights into the mechanism of C5aR inhibition by PMX53 via implicit solvent molecular dynamics simulations and docking

scientific article

Insights into the structure, correlated motions, and electrostatic properties of two HIV-1 gp120 V3 loops

scientific article

Integrated Computational and Experimental Approach for Lead Optimization and Design of Compstatin Variants with Improved Activity

article

M13 bacteriophage spheroids as scaffolds for directed synthesis of spiky gold nanostructures

scientific article published on 01 July 2018

Molecular analysis of the interaction between staphylococcal virulence factor Sbi-IV and complement C3d.

scientific article

Molecular dynamics in drug design: new generations of compstatin analogs.

scientific article published on 9 February 2012

Molecular thermodynamics for charged biomacromolecules

NMR evidence for multiple conformations in a highly helical model peptide.

scientific article published in December 1993

NMR evidence of charge-dependent interaction between various PND V3 and CCR5 N-terminal peptides

scientific article published on 01 January 2009

New compstatin peptides containing N-terminal extensions and non-natural amino acids exhibit potent complement inhibition and improved solubility characteristics

scientific article

Novel compstatin family peptides inhibit complement activation by drusen-like deposits in human retinal pigmented epithelial cell cultures.

scientific article published on 15 August 2013

Physical methods for structure, dynamics and binding in immunological research.

scientific article

Related protein-protein interaction modules present drastically different surface topographies despite a conserved helical platform

scientific article

Resonance raman investigations of site-directed mutants of myoglobin: effects of distal histidine replacement.

scientific article published in May 1989

Solution structure of a bent alpha-helix

scientific article published on 17 October 2007

Solvation effects in calculated electrostatic association free energies for the C3d-CR2 complex and comparison with experimental data

scientific article

Species specificity of the complement inhibitor compstatin investigated by all-atom molecular dynamics simulations

scientific article

Spectroscopic studies of myoglobin at low pH: heme structure and ligation

scientific article

Structural aspects and design of low-molecular-mass complement inhibitors

scientific article

The effect of electrostatics on factor H function and related pathologies

scientific article

The molecular basis for protein kinase A anchoring revealed by solution NMR

scientific article

The pH dependence of stability of the activation helix and the catalytic site of GART.

scientific article published in September 2003

The structural basis of compstatin activity examined by structure-function-based design of peptide analogs and NMR.

scientific article

The two sides of complement C3d: evolution of electrostatics in a link between innate and adaptive immunity

scientific article

Thermodynamic studies on the interaction of the third complement component and its inhibitor, compstatin

scientific article published on 15 October 2004

Two SCA (stigma/style cysteine-rich adhesin) isoforms show structural differences that correlate with their levels of in vitro pollen tube adhesion activity

scientific article published on 18 September 2007

Viral regulators of complement activation: structure, function and evolution

scientific article published on 27 June 2014

pH dependence of stability of the 10th human fibronectin type III domain: a computational study

scientific article published on 13 October 2007

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