Search filters

List of works by Paul D. Cotter

'Microbes in sport' -The potential role of the gut microbiota in athlete health and performance

scientific article published on 25 January 2017

16S rRNA gene sequencing of mock microbial populations- impact of DNA extraction method, primer choice and sequencing platform

scientific article

A Bioengineered Nisin Derivative, M21A, in Combination with Food Grade Additives Eradicates Biofilms of Listeria monocytogenes

scientific article published on 30 November 2016

A Profile Hidden Markov Model to investigate the distribution and frequency of LanB-encoding lantibiotic modification genes in the human oral and gut microbiome

scientific article published on 27 April 2017

A Prospective Metagenomic and Metabolomic Analysis of the Impact of Exercise and/or Whey Protein Supplementation on the Gut Microbiome of Sedentary Adults.

scientific article

A bioengineered nisin derivative to control biofilms of Staphylococcus pseudintermedius

scientific article

A comparison of methods used to extract bacterial DNA from raw milk and raw milk cheese

scientific article published on 24 April 2012

A comparison of the activities of lacticin 3147 and nisin against drug-resistant Staphylococcus aureus and Enterococcus species.

scientific article published on 26 June 2009

A degenerate PCR-based strategy as a means of identifying homologues of aminoglycoside and β-lactam resistance genes in the gut microbiota.

scientific article

A food-grade approach for functional analysis and modification of native plasmids in Lactococcus lactis.

scientific article

A glutamate decarboxylase system protects Listeria monocytogenes in gastric fluid

scientific article published in April 2001

A novel method of microsatellite genotyping-by-sequencing using individual combinatorial barcoding

scientific article

A system for the random mutagenesis of the two-peptide lantibiotic lacticin 3147: analysis of mutants producing reduced antibacterial activities

scientific article published on 01 January 2007

APC 678 Reduces Shedding of the Pathogen in a Murine Model

scientific article published on 20 February 2019

Altered FXR signalling is associated with bile acid dysmetabolism in short bowel syndrome-associated liver disease.

scientific article

Altering the composition of caseicins A and B as a means of determining the contribution of specific residues to antimicrobial activity

scientific article published on 4 February 2011

An 'Upp'-turn in bacteriocin receptor identification

scientific article published on 19 May 2014

Anaerobic sporeformers and their significance with respect to milk and dairy products.

scientific article published on 27 December 2014

Analysis of Health Benefits Conferred by Lactobacillus Species from Kefir

scientific article published on 01 June 2019

Analysis of anti-Clostridium difficile activity of thuricin CD, vancomycin, metronidazole, ramoplanin, and actagardine, both singly and in paired combinations

scientific article published on 9 April 2013

Analysis of the role of the Listeria monocytogenes F0F1 -AtPase operon in the acid tolerance response

scientific article published on 01 September 2000

Antimicrobial peptides as therapeutic agents

scientific article published on 19 June 2012

Antimicrobials: Strategies for targeting obesity and metabolic health?

scientific article published on 27 September 2012

Antipsychotics and the gut microbiome: olanzapine-induced metabolic dysfunction is attenuated by antibiotic administration in the rat

scientific article

Assessing the contributions of the LiaS histidine kinase to the innate resistance of Listeria monocytogenes to nisin, cephalosporins, and disinfectants.

scientific article published on 10 February 2012

Assessment of the Bacteriocinogenic Potential of Marine Bacteria Reveals Lichenicidin Production by Seaweed-Derived Bacillus spp ⬇️

scientific article published on October 18, 2012

Atypical Listeria innocua strains possess an intact LIPI-3

scientific article

Author response: Linking lifestyle and microbes

scientific article published on 8 August 2014

Bacterial communities established in bauxite residues with different restoration histories

scientific article

Bacterial lantibiotics: strategies to improve therapeutic potential.

scientific article

Bacteriocin production by Bifidobacterium spp. A review

scientific article published on 04 February 2013

Bacteriocin production: a relatively unharnessed probiotic trait?

scientific article

Bacteriocin-Antimicrobial Synergy: A Medical and Food Perspective.

scientific article

Bacteriocins - a viable alternative to antibiotics?

scientific article published on 24 December 2012

Bacteriocins: Novel Solutions to Age Old Spore-Related Problems?

scientific article

Bactofencin A, a new type of cationic bacteriocin with unusual immunity

scientific article

Beneficial modulation of the gut microbiota.

scientific article

Bioengineered nisin A derivatives with enhanced activity against both Gram positive and Gram negative pathogens

scientific article

Bioengineered nisin derivatives with enhanced activity in complex matrices

scientific article published on 20 January 2012

Bioengineering Lantibiotics for Therapeutic Success

scientific article

Bioengineering nisin to overcome the nisin resistance protein

scientific article published on 12 February 2019

Bioengineering of a Nisin A‐producing Lactococcus lactis to create isogenic strains producing the natural variants Nisin F, Q and Z ⬇️

scientific article published on 08 September 2010

Bioengineering of the model lantibiotic nisin

scientific article

Bioengineering: a bacteriocin perspective

scientific article published on 24 August 2012

Biofilms in Food Processing Environments: Challenges and Opportunities

scientific article published on 17 January 2019

Biotechnological applications of functional metagenomics in the food and pharmaceutical industries

scientific article (publication date: 2015)

Bovine serum albumin as the dominant form of dietary protein reduces subcutaneous fat mass, plasma leptin and plasma corticosterone in high fat-fed C57/BL6J mice

scientific article published on 20 July 2015

Brevibacillus laterosporus strains BGSP7, BGSP9 and BGSP11 isolated from silage produce broad spectrum multi-antimicrobials

scientific article published on 10 May 2019

Build the Read: A Hands-On Activity for Introducing Microbiology Students to Next-Generation DNA Sequencing and Bioinformatics.

scientific article

Changes in the colon microbiota and intestinal cytokine gene expression following minimal intestinal surgery.

scientific article

Cholestasis induced by bile duct ligation promotes changes in the intestinal microbiome in mice

scientific article published on 23 August 2019

Comparative Genomic Analysis Reveals a Diverse Repertoire of Genes Involved in Prokaryote-Eukaryote Interactions within the Pseudovibrio Genus

scientific article published on 30 March 2016

Compared to casein, bovine lactoferrin reduces plasma leptin and corticosterone and affects hypothalamic gene expression without altering weight gain or fat mass in high fat diet fed C57/BL6J mice

scientific article published on 8 December 2015

Comparing Apples and Oranges?: Next Generation Sequencing and Its Impact on Microbiome Analysis.

scientific article published on 5 February 2016

Comparison of the Potency of the Lipid II Targeting Antimicrobials Nisin, Lacticin 3147 and Vancomycin Against Gram-Positive Bacteria

scientific article published on 01 June 2012

Comparison of the activities of the lantibiotics nisin and lacticin 3147 against clinically significant mycobacteria

scientific article published on 23 May 2010

Complete alanine scanning of the two-component lantibiotic lacticin 3147: generating a blueprint for rational drug design.

scientific article published in November 2006

Composition and energy harvesting capacity of the gut microbiota: relationship to diet, obesity and time in mouse models.

scientific article

Compromised Lactobacillus helveticus starter activity in the presence of facultative heterofermentative Lactobacillus casei DPC6987 results in atypical eye formation in Swiss-type cheese

scientific article published on 21 January 2016

Contrasting effects of Bifidobacterium breve NCIMB 702258 and Bifidobacterium breve DPC 6330 on the composition of murine brain fatty acids and gut microbiota.

scientific article

Contribution of penicillin-binding protein homologs to antibiotic resistance, cell morphology, and virulence of Listeria monocytogenes EGDe.

scientific article published in August 2006

Controlled functional expression of the bacteriocins pediocin PA-1 and bactofencin A in Escherichia coli

scientific article published on 8 June 2017

Controlling Listeria monocytogenes in Cottage cheese through heterologous production of enterocin A by Lactococcus lactis

scientific article published on 15 November 2007

Correction for Walsh et al., Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir.

scientific article published on January 2017

Correction: N-3 Polyunsaturated Fatty Acids (PUFAs) Reverse the Impact of Early-Life Stress on the Gut Microbiota

scientific article published on 30 October 2015

Cronobacter spp. in powdered infant formula.

scientific article published on March 2012

Crop Establishment Practices Are a Driver of the Plant Microbiota in Winter Oilseed Rape (Brassica napus).

scientific article published on 09 August 2017

Cross-immunity and immune mimicry as mechanisms of resistance to the lantibiotic lacticin 3147

scientific article published on 16 January 2009

Depletion of the gut microbiota differentially affects the impact of whey protein on high-fat diet-induced obesity and intestinal permeability

scientific article published on 01 June 2021

Detection and Enumeration of Spore-Forming Bacteria in Powdered Dairy Products

scientific article published on 31 January 2017

Development and Application of a Blastocystis Subtype-Specific PCR Assay Reveals that Mixed-Subtype Infections Are Common in a Healthy Human Population

scientific article published on 3 April 2015

Dietary trans-10, cis-12-conjugated linoleic acid alters fatty acid metabolism and microbiota composition in mice.

scientific article published on 20 February 2015

Dietary α-lactalbumin alters energy balance, gut microbiota composition and intestinal nutrient transporter expression in high-fat diet-fed mice

scientific article published on 05 March 2019

Discovery of medically significant lantibiotics.

scientific article published on March 2009

Distinct microbiome composition and metabolome exists across subgroups of elite Irish athletes

scientific article published on 18 September 2019

Divergent metabolic outcomes arising from targeted manipulation of the gut microbiota in diet-induced obesity.

scientific article published on 16 February 2012

Diversity and composition of the gut microbiota of Atlantic salmon (Salmo salar) farmed in Irish waters

scientific article published on 28 June 2019

Draft Genome Sequence of Campylobacter ureolyticus Strain CIT007, the First Whole-Genome Sequence of a Clinical Isolate.

scientific article published on 10 April 2014

Draft Genome Sequence of Lactobacillus casei DPC6800, an Isolate with the Potential to Diversify Flavor in Cheese

scientific article published on 3 March 2016

Drunk bugs: Chronic vapour alcohol exposure induces marked changes in the gut microbiome in mice

scientific article published in February 2017

Early Salmonella Typhimurium infection in pigs disrupts Microbiome composition and functionality principally at the ileum mucosa.

scientific article

Effect of bioengineering lacticin 3147 lanthionine bridges on specific activity and resistance to heat and proteases.

scientific article

Effect of broad- and narrow-spectrum antimicrobials on Clostridium difficile and microbial diversity in a model of the distal colon.

scientific article

Effect of milk centrifugation and incorporation of high heat-treated centrifugate on the microbial composition and levels of volatile organic compounds of Maasdam cheese

scientific article published on 15 March 2018

Efficacies of nisin A and nisin V semipurified preparations alone and in combination with plant essential oils for controlling Listeria monocytogenes.

scientific article

Erratum to: The altered gut microbiota in adults with cystic fibrosis

scientific article published on 27 April 2017

Evaluation of Lactococcus lactis Isolates from Nondairy Sources with Potential Dairy Applications Reveals Extensive Phenotype-Genotype Disparity and Implications for a Revised Species

scientific article published on 3 April 2015

Exercise and associated dietary extremes impact on gut microbial diversity

scientific article

Exercise and the microbiota.

scientific article published on 24 March 2015

Exopolysaccharide-producing probiotic Lactobacilli reduce serum cholesterol and modify enteric microbiota in ApoE-deficient mice

scientific article

Exploring a Possible Link between the Intestinal Microbiota and Feed Efficiency in Pigs

scientific article published on 19 May 2017

Extensive manipulation of caseicins A and B highlights the tolerance of these antimicrobial peptides to change.

scientific article published on 13 January 2012

Fate and efficacy of lacticin 3147-producing Lactococcus lactis in the mammalian gastrointestinal tract

scientific article published on 7 March 2011

Fecal Microbiota Transplantation in Gestating Sows and Neonatal Offspring Alters Lifetime Intestinal Microbiota and Growth in Offspring.

scientific article published on 13 March 2018

Fighting biofilms with lantibiotics and other groups of bacteriocins.

scientific article published on 19 April 2018

Flagging flora: help from bacteriocins?

scientific article published on 07 September 2011

FoodMicrobionet: A database for the visualisation and exploration of food bacterial communities based on network analysis.

scientific article published on 9 December 2015

Forgotten fungi-the gut mycobiome in human health and disease

scientific article

Functional Characterization of the Lactolisterin BU Gene Cluster of Lactococcus lactis subsp. lactis BGBU1-4

article

Further Identification of Novel Lantibiotic Operons Using LanM-Based Genome Mining

scientific article published on 01 March 2011

Gender-dependent consequences of chronic olanzapine in the rat: effects on body weight, inflammatory, metabolic and microbiota parameters

scientific article published on 11 January 2012

Gene encoded antimicrobial peptides, a template for the design of novel anti-mycobacterial drugs

scientific article published on November 2010

Generation of nonpolar deletion mutants in Listeria monocytogenes using the "SOEing" method

scientific article published on 01 January 2014

Genome Sequence of Geobacillus stearothermophilus DSM 458, an Antimicrobial-Producing Thermophilic Bacterium, Isolated from a Sugar Beet Factory

scientific article published on 26 October 2017

Genome mining for radical SAM protein determinants reveals multiple sactibiotic-like gene clusters.

scientific article

Genomic Characterization of Sulphite Reducing Bacteria Isolated From the Dairy Production Chain.

scientific article published on 5 July 2018

Gut microbes from the phylogenetically diverse genus Eubacterium and their various contributions to gut health

scientific article published on 01 November 2020

Gut microbiota as a source of novel antimicrobials.

scientific article published on 27 March 2018

Gut microbiota depletion from early adolescence in mice: Implications for brain and behaviour

scientific article published on 10 April 2015

Gut microbiota: implications for sports and exercise medicine.

scientific article

Health benefits of fermented foods: microbiota and beyond

scientific article

Heterologous Expression of Biopreservative Bacteriocins With a View to Low Cost Production

scientific article published on 26 July 2018

Heterologous expression of thuricin CD immunity genes in Listeria monocytogenes

scientific article

High-throughput DNA sequencing to survey bacterial histidine and tyrosine decarboxylases in raw milk cheeses

scientific article published on 17 November 2015

High-throughput metataxonomic characterization of the raw milk microbiota identifies changes reflecting lactation stage and storage conditions

scientific article

High-throughput sequence-based analysis of the bacterial composition of kefir and an associated kefir grain.

scientific article

High-throughput sequence-based analysis of the intestinal microbiota of weanling pigs fed genetically modified MON810 maize expressing Bacillus thuringiensis Cry1Ab (Bt maize) for 31 days.

scientific article

High-throughput sequencing for detection of subpopulations of bacteria not previously associated with artisanal cheeses.

scientific article

High-throughput sequencing reveals the incomplete, short-term recovery of infant gut microbiota following parenteral antibiotic treatment with ampicillin and gentamicin

scientific article

Homologues and bioengineered derivatives of LtnJ vary in ability to form D-alanine in the lantibiotic lacticin 3147. ⬇️

scientific article published on 28 November 2011

Identification and characterisation of capidermicin, a novel bacteriocin produced by Staphylococcus capitis

scientific article published on 16 October 2019

Identification of Gut Bacteria such as Lactobacillus johnsonii that Disseminate to Systemic Tissues of Wild Type and MyD88-/- Mice

publication published on 01 January 2022

Identification of a novel two-peptide lantibiotic, haloduracin, produced by the alkaliphile Bacillus halodurans C-125

scientific article published on 01 February 2007

Identification of a novel two-peptide lantibiotic, lichenicidin, following rational genome mining for LanM proteins.

scientific article published on 26 June 2009

Identification of aminoglycoside and β-lactam resistance genes from within an infant gut functional metagenomic library.

scientific article

Impact of Environmental Factors on Bacteriocin Promoter Activity in Gut-Derived Lactobacillus salivarius

scientific article published on 4 September 2015

Impact of dietary fatty acids on metabolic activity and host intestinal microbiota composition in C57BL/6J mice.

scientific article published on 20 February 2014

Impact of leucine on energy balance

scientific article published on 26 April 2012

Impact of the broad-spectrum antimicrobial peptide, lacticin 3147, on Streptococcus mutans growing in a biofilm and in human saliva

scientific article published on 25 October 2011

Impacts of Seasonal Housing and Teat Preparation on Raw Milk Microbiota: a High-Throughput Sequencing Study

scientific article

Improvement of Feed Efficiency in Pigs through Microbial Modulation via Fecal Microbiota Transplantation in Sows and Dietary Supplementation of Inulin in Offspring

scientific article published on 30 October 2019

In Vitro Activities of Nisin and Nisin Derivatives Alone and In Combination with Antibiotics against Staphylococcus Biofilms

scientific article (publication date: 2016)

In silico analysis highlights the frequency and diversity of type 1 lantibiotic gene clusters in genome sequenced bacteria.

scientific article

In silico assigned resistance genes confer Bifidobacterium with partial resistance to aminoglycosides but not to β-lactams

scientific article

In silico identification of bacteriocin gene clusters in the gastrointestinal tract, based on the Human Microbiome Project's reference genome database

scientific article published on 16 September 2015

In vivo activity of nisin A and nisin V against Listeria monocytogenes in mice.

scientific article

Influence of GABA and GABA-producing Lactobacillus brevis DPC 6108 on the development of diabetes in a streptozotocin rat model

article

Influence of the Intestinal Microbiota on Colonization Resistance to and the Shedding Pattern of Naturally Exposed Pigs

scientific article published on 01 March 2019

Insights into Lantibiotic Immunity Provided by Bioengineering of LtnI ⬇️

scientific article published on July 16, 2012

Insights into the Mode of Action of the Sactibiotic Thuricin CD.

scientific article published on 20 April 2017

Instances of altered gut microbiomes among Irish cricketers over periods of travel in the lead up to the 2016 World Cup: A sequencing analysis

scientific article published on 11 January 2020

Intensive mutagenesis of the nisin hinge leads to the rational design of enhanced derivatives.

scientific article published on 11 November 2013

Interactions between gut microbiota, food and the obese host

Investigating the importance of charged residues in lantibiotics.

scientific article

Isolation and analysis of bacteria with antimicrobial activities from the marine sponge Haliclona simulans collected from Irish waters.

scientific article published on 25 October 2008

Lack of Heterogeneity in Bacteriocin Production Across a Selection of Commercial Probiotic Products.

scientific article

Lacticin 3147--biosynthesis, molecular analysis, immunity, bioengineering and applications.

scientific article

Lactolisterin BU, a Novel Class II Broad-Spectrum Bacteriocin from Lactococcus lactis subsp. lactis bv. diacetylactis BGBU1-4.

scientific article

Lantibiotic production by pathogenic microorganisms

scientific article published on September 2012

Lantibiotic resistance

scientific article

Large-scale genome-wide analysis links lactic acid bacteria from food with the gut microbiome

scientific article published on 25 May 2020

Listeriolysin S, a novel peptide haemolysin associated with a subset of lineage I Listeria monocytogenes

scientific article

Loss of MicroRNA-21 Influences the Gut Microbiota, Causing Reduced Susceptibility in a Murine Model of Colitis

scientific article published on 01 June 2018

Marine Pseudovibrio sp. as a novel source of antimicrobials

scientific article

Mesophilic Sporeformers Identified in Whey Powder by Using Shotgun Metagenomic Sequencing

scientific article published on 01 October 2018

Metabolic phenotyping of the human microbiome

scientific article published on 22 November 2019

Metagenome-based surveillance and diagnostic approaches to studying the microbial ecology of food production and processing environments.

scientific article

Microbial Succession and Flavor Production in the Fermented Dairy Beverage Kefir

scientific article published on September 2016

Microbial composition of human appendices from patients following appendectomy.

scientific article

Microbial solutions to microbial problems; lactococcal bacteriocins for the control of undesirable biota in food.

scientific article published in January 2005

Microbiota diversity and stability of the preterm neonatal ileum and colon of two infants

scientific article

Moderate-intensity aerobic and resistance exercise is safe and favorably influences body composition in patients with quiescent Inflammatory Bowel Disease: a randomized controlled cross-over trial

article

Molecular approaches to analysing the microbial composition of raw milk and raw milk cheese.

scientific article

New Weapons to Fight Old Enemies: Novel Strategies for the (Bio)control of Bacterial Biofilms in the Food Industry

scientific article

Nisin H Is a New Nisin Variant Produced by the Gut-Derived Strain Streptococcus hyointestinalis DPC6484

scientific article published on 3 April 2015

Novel insights into the microbiology of fermented dairy foods.

scientific article

Nucleic acid-based approaches to investigate microbial-related cheese quality defects.

scientific article published on 21 January 2013

Omics-Based Insights into Flavor Development and Microbial Succession within Surface-Ripened Cheese

scientific article published on 30 January 2018

Oral Delivery of Nisin in Resistant Starch Based Matrices Alters the Gut Microbiota in Mice.

scientific article

Plantaricyclin A, a Novel Circular Bacteriocin Produced by Lactobacillus plantarum NI326: Purification, Characterization, and Heterologous Production.

scientific article published on 13 October 2017

Porcine Feed Efficiency-Associated Intestinal Microbiota and Physiological Traits: Finding Consistent Cross-Locational Biomarkers for Residual Feed Intake.

scientific article published on 18 June 2019

Porcine reproductive and respiratory syndrome virus impacts on gut microbiome in a strain virulence-dependent fashion

publication published on 03 March 2021

Post-weaning social isolation of rats leads to long-term disruption of the gut microbiota-immune-brain axis

scientific article

Potential for enriching next-generation health-promoting gut bacteria through prebiotics and other dietary components

scientific article published on 22 May 2019

Prediction and Exploration of Potential Bacteriocin Gene Clusters Within the Bacterial Genus

article

Prenatal stress-induced alterations in major physiological systems correlate with gut microbiota composition in adulthood

scientific article published on 17 June 2015

Prevalence and genetic diversity of Blastocystis in family units living in the United States

scientific article

Production of bioactive substances by intestinal bacteria as a basis for explaining probiotic mechanisms: bacteriocins and conjugated linoleic acid

scientific article published on 14 June 2011

Production of multiple bacteriocins from a single locus by gastrointestinal strains of Lactobacillus salivarius

scientific article published on 7 October 2011

Production of multiple bacteriocins, including the novel bacteriocin gassericin M, by Lactobacillus gasseri LM19, a strain isolated from human milk

scientific article published on 13 March 2020

Production of the Bsa lantibiotic by community-acquired Staphylococcus aureus strains.

scientific article

Protein quality and the protein to carbohydrate ratio within a high fat diet influences energy balance and the gut microbiota in C57BL/6J mice.

scientific article

Proteomics as the final step in the functional metagenomics study of antimicrobial resistance.

scientific article

Re: Gut microbiota depletion from early adolescence in mice: Implications for brain and behaviour

scientific article

Real-time PCR assay to differentiate Listeriolysin S-positive and -negative strains of Listeria monocytogenes.

scientific article

Relatedness between the two-component lantibiotics lacticin 3147 and staphylococcin C55 based on structure, genetics and biological activity.

scientific article

Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature

scientific article

Role of the gut microbiota in health and chronic gastrointestinal disease: understanding a hidden metabolic organ

scientific article published on July 2013

Saturation mutagenesis of lysine 12 leads to the identification of derivatives of nisin A with enhanced antimicrobial activity.

scientific article

Saturation mutagenesis of selected residues of the α-peptide of the lantibiotic lacticin 3147 yields a derivative with enhanced antimicrobial activity

scientific article published on 25 February 2013

Seasonality and Geography Have a Greater Influence than the Use of Chlorine-Based Cleaning Agents on the Microbiota of Bulk Tank Raw Milk

scientific article published on 01 September 2021

Sequence-based analysis of the bacterial and fungal compositions of multiple kombucha (tea fungus) samples.

scientific article published on 25 September 2013

Sequence-based analysis of the intestinal Microbiota of sows and their offspring fed genetically modified maize expressing a truncated form of Bacillus thuringiensis Cry1Ab protein (Bt Maize).

scientific article

Sequence-based analysis of the microbial composition of water kefir from multiple sources.

scientific article

Sequencing of the Cheese Microbiome and Its Relevance to Industry.

scientific article

Sequencing-based analysis of the bacterial and fungal composition of kefir grains and milks from multiple sources.

scientific article published on 19 July 2013

Short bowel syndrome (SBS)-associated alterations within the gut-liver axis evolve early and persist long-term in the piglet model of short bowel syndrome

scientific article

Short-term consumption of a high-fat diet increases host susceptibility to Listeria monocytogenes infection

scientific article published on 18 January 2019

Shotgun sequencing of the vaginal microbiome reveals both a species and functional potential signature of preterm birth

scientific article published on 12 November 2020

Small intestine and microbiota

scientific article published on March 1, 2011

Spatial variation of the colonic microbiota in patients with ulcerative colitis and control volunteers

scientific article published on 16 January 2015

Species classifier choice is a key consideration when analysing low-complexity food microbiome data

scientific article published on 20 March 2018

Spontaneous resistance in Lactococcus lactis IL1403 to the lantibiotic lacticin 3147.

scientific article

Strain-Level Metagenomic Analysis of the Fermented Dairy Beverage Nunu Highlights Potential Food Safety Risks

scientific article published on 16 June 2017

Strategies to improve the bacteriocin protection provided by lactic acid bacteria

scientific article published on 18 January 2013

Streptolysin S-like virulence factors: the continuing sagA.

scientific article published on 08 August 2011

Streptozotocin-induced type-1-diabetes disease onset in Sprague-Dawley rats is associated with an altered intestinal microbiota composition and decreased diversity.

scientific article

Structural characterization of lacticin 3147, a two-peptide lantibiotic with synergistic activity.

scientific article published in March 2004

Studies with bioengineered Nisin peptides highlight the broad-spectrum potency of Nisin V.

scientific article published on July 2010

Subspecies diversity in bacteriocin production by intestinal Lactobacillus salivarius strains.

scientific article published on 15 August 2012

Subtilomycin: a new lantibiotic from Bacillus subtilis strain MMA7 isolated from the marine sponge Haliclona simulans.

scientific article published on 3 June 2013

Supernumerary marker chromosomes derived from chromosome 6: Cytogenetic, molecular cytogenetic, and array CGH characterization ⬇️

scientific article published on May 25, 2012

Surviving the acid test: responses of gram-positive bacteria to low pH.

scientific article

Synergistic Nisin-Polymyxin Combinations for the Control of Pseudomonas Biofilm Formation

scientific article published on 26 October 2016

Targeting the microbiota to address diet-induced obesity: a time dependent challenge.

scientific article

Technological characterization of bacteriocin producing Lactococcus lactis strains employed to control Listeria monocytogenes in cottage cheese

scientific article published on 30 October 2011

TelA contributes to the innate resistance of Listeria monocytogenes to nisin and other cell wall-acting antibiotics

scientific article published on 16 August 2010

Temporal and spatial differences in microbial composition during the manufacture of a continental-type cheese

scientific article

The ABC transporter AnrAB contributes to the innate resistance of Listeria monocytogenes to nisin, bacitracin, and various beta-lactam antibiotics.

scientific article published on 19 July 2010

The Application of Metagenomics to Study Microbial Communities and Develop Desirable Traits in Fermented Foods

scientific article published in 2022

The Fungal Frontier: A Comparative Analysis of Methods Used in the Study of the Human Gut Mycobiome.

scientific article published on 31 July 2017

The Human Mesenteric Lymph Node Microbiome Differentiates Between Crohn's Disease and Ulcerative Colitis.

scientific article

The Lantibiotic Lacticin 3147 Prevents Systemic Spread of Staphylococcus aureus in a Murine Infection Model.

scientific article published on 12 January 2012

The Microbiota and Health Promoting Characteristics of the Fermented Beverage Kefir

scientific article

The Potential Impact of Probiotics on the Gut Microbiome of Athletes

scientific article published on 21 September 2019

The Prevalence and Control of Bacillus and Related Spore-Forming Bacteria in the Dairy Industry.

scientific article

The altered gut microbiota in adults with cystic fibrosis

scientific article

The bacteriocin bactofencin A subtly modulates gut microbial populations.

scientific article

The dawning of a 'Golden era' in lantibiotic bioengineering.

scientific article published on 12 October 2010

The dynamics of the antibiotic resistome in the feces of freshly weaned pigs following therapeutic administration of oxytetracycline

scientific article published on 11 March 2019

The effect of feeding Bt MON810 maize to pigs for 110 days on intestinal microbiota

scientific article

The efficacy of thuricin CD, tigecycline, vancomycin, teicoplanin, rifampicin and nitazoxanide, independently and in paired combinations against Clostridium difficile biofilms and planktonic cells.

scientific article published on 2 June 2016

The generation of nisin variants with enhanced activity against specific gram-positive pathogens.

scientific article published on 9 May 2008

The glutamate decarboxylase acid resistance mechanism affects survival of Listeria monocytogenes LO28 in modified atmosphere-packaged foods

scientific article published on 01 December 2007

The gut microbiota and its relationship to diet and obesity: new insights

scientific article

The impact of antibiotics on the gut microbiota as revealed by high throughput DNA sequencing

scientific article

The impact of nisin on sensitive and resistant mutants of Listeria monocytogenes in cottage cheese

scientific article published on 12 April 2011

The individual-specific and diverse nature of the preterm infant microbiota.

scientific article published on 8 January 2013

The influence of rosuvastatin on the gastrointestinal microbiota and host gene expression profiles.

scientific article

The intestinal protist Blastocystis is not a common member of the healthy infant gut microbiota in a Westernized country (Ireland).

scientific article published on 5 February 2018

The metabolic role of the microbiota.

scientific article published in April 2015

The microbial content of raw and pasteurized cow milk as determined by molecular approaches

scientific article published on 5 June 2013

The microbial eukaryote Blastocystis is a prevalent and diverse member of the healthy human gut microbiota.

scientific article

The microbiome of deep-sea fish reveals new microbial species and a sparsity of antibiotic resistance genes

scientific article published on 01 January 2021

The microbiome of professional athletes differs from that of more sedentary subjects in composition and particularly at the functional metabolic level.

scientific article published on 30 March 2017

The potency of the broad spectrum bacteriocin, bactofencin A, against staphylococci is highly dependent on primary structure, N-terminal charge and disulphide formation

scientific article published in Scientific Reports

The potential for emerging therapeutic options for Clostridium difficile infection

scientific article

The rumen microbiome: a crucial consideration when optimising milk and meat production and nitrogen utilisation efficiency

scientific article published on 12 September 2018

The sactibiotic subclass of bacteriocins: an update

scientific article published on January 2015

The two peptide lantibiotic lacticin 3147 acts synergistically with polymyxin to inhibit Gram negative bacteria.

scientific article

Thermus and the Pink Discoloration Defect in Cheese

scientific article published on May 2016

Tn6188 - a novel transposon in Listeria monocytogenes responsible for tolerance to benzalkonium chloride

scientific article

Tracing mother-infant transmission of bacteriophages by means of a novel analytical tool for shotgun metagenomic datasets: METAnnotatorX

article

Translating Omics to Food Microbiology.

scientific article published on 11 January 2017

Two-peptide lantibiotics: a medical perspective.

scientific article published on December 2007

Unravelling the metabolic impact of SBS-associated microbial dysbiosis: Insights from the piglet short bowel syndrome model

scientific article published on 23 February 2017

Use of enhanced nisin derivatives in combination with food-grade oils or citric acid to control Cronobacter sakazakii and Escherichia coli O157:H7.

scientific article published on 7 February 2017

Whey protein effects on energy balance link the intestinal mechanisms of energy absorption with adiposity and hypothalamic neuropeptide gene expression

scientific article

Paulina is supported by:

About Paulina

Help