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List of works by Ole N Jensen

A biotin enrichment strategy identifies novel carbonylated amino acids in proteins from human plasma

scientific article

A computational model for histone mark propagation reproduces the distribution of heterochromatin in different human cell types

scientific article

A new strategy for identification of N-glycosylated proteins and unambiguous assignment of their glycosylation sites using HILIC enrichment and partial deglycosylation.

scientific article published in May 2004

A probabilistic framework for peptide and protein quantification from data-dependent and data-independent LC-MS proteomics experiments

scientific article

A proteome study of secreted prostatic factors affecting osteoblastic activity: galectin-1 is involved in differentiation of human bone marrow stromal cells.

scientific article

A proteome study of secreted prostatic factors affecting osteoblastic activity: identification and characterisation of cyclophilin A.

scientific article

A proteomics approach to the identification of biomarkers for psoriasis utilising keratome biopsy

scientific article published on 20 September 2013

A simple and fast method to determine the parameters for fuzzy c–means cluster analysis ⬇️

scientific article published on September 29, 2010

A urokinase receptor-associated protein with specific collagen binding properties

scientific article

Abnormal levels of histone methylation in the retinas of diabetic rats are reversed by minocycline treatment

scientific article published on 24 March 2017

Accumulation of histone variant H3.3 with age is associated with profound changes in the histone methylation landscape.

scientific article

Accurate H3K27 methylation can be established de novo by SUZ12-directed PRC2.

scientific article published on 26 February 2018

Acute phencyclidine treatment induces extensive and distinct protein phosphorylation in rat frontal cortex.

scientific article published on 24 February 2014

Allosteric activation of coagulation factor VIIa visualized by hydrogen exchange

scientific article published on 10 May 2006

An Enzymatic Deglycosylation Scheme Enabling Identification of Core FucosylatedN-Glycans and O-Glycosylation Site Mapping of Human Plasma Proteins

scientific article published on 18 July 2007

Analysis of histidine phosphorylation using tandem MS and ion-electron reactions

scientific article

Analysis of mass spectrometry data in proteomics.

scientific article

Analytical Strategies in Mass Spectrometry-Based Phosphoproteomics

scientific article published on 01 January 2011

Analytical assessment of the osteoinductive material COLLOSSE.

scientific article published in May 2009

Analytical strategies for phosphoproteomics

scientific article published on March 2009

Assessment and improvement of statistical tools for comparative proteomics analysis of sparse data sets with few experimental replicates

scientific article

Assessment of lectin and HILIC based enrichment protocols for characterization of serum glycoproteins by mass spectrometry

scientific article

Atorvastatin modulates the profile of proteins released by human atherosclerotic plaques

scientific article published on 8 February 2007

Automated and high confidence protein phosphorylation site localization using complementary collision-activated dissociation and electron transfer dissociation tandem mass spectrometry.

scientific article

Automated phosphorylation site mapping

scientific article published in October 2006

Autophosphorylation is essential for the in vivo function of the Lotus japonicus Nod factor receptor 1 and receptor-mediated signalling in cooperation with Nod factor receptor 5.

scientific article

BRAG1, a Sec7 domain-containing protein, is a component of the postsynaptic density of excitatory synapses

scientific article published on 11 October 2006

Biomarker discovery from pancreatic cancer secretome using a differential proteomic approach

scientific article

CD163-L1 is an endocytic macrophage protein strongly regulated by mediators in the inflammatory response

scientific article

Candida albicans induces pro-inflammatory and anti-apoptotic signals in macrophages as revealed by quantitative proteomics and phosphoproteomics

scientific article published on 5 July 2013

Candidate hippocampal biomarkers of susceptibility and resilience to stress in a rat model of depression.

scientific article

Cell cycle-specific UNG2 phosphorylations regulate protein turnover, activity and association with RPA.

scientific article

Characterization of Complete Histone Tail Proteoforms Using Differential Ion Mobility Spectrometry.

scientific article published on 13 April 2017

Characterization of HSP27 phosphorylation sites in human atherosclerotic plaque secretome

scientific article

Characterization of N-palmitoylated human growth hormone by in situ liquid-liquid extraction and MALDI tandem mass spectrometry.

scientific article

Characterization of an antagonistic switch between histone H3 lysine 27 methylation and acetylation in the transcriptional regulation of Polycomb group target genes

scientific article

Characterization of human myotubes from type 2 diabetic and nondiabetic subjects using complementary quantitative mass spectrometric methods

scientific article

Characterization of phosphoproteins from electrophoretic gels by nanoscale Fe(III) affinity chromatography with off-line mass spectrometry analysis ⬇️

scientific article published on February 1, 2001

Characterization of sialylated and fucosylated glycopeptides of beta2-glycoprotein I by a combination of HILIC LC and MALDI MS/MS.

scientific article

Chlorosome proteins studied by MALDI-TOF-MS: topology of CsmA in Chlorobium tepidum.

scientific article published in November 2005

Combinatory Treatment of Canavanine and Arginine Deprivation Efficiently Targets Human Glioblastoma Cells via Pleiotropic Mechanisms

scientific article published on 30 September 2020

Combined experimental and statistical strategy for mass spectrometry based serum protein profiling for diagnosis of breast cancer: a case-control study

scientific article

Comparative proteomic analysis of histone post-translational modifications upon ischemia/reperfusion-induced retinal injury

scientific article published on 26 March 2014

Complex-dependent histone acetyltransferase activity of KAT8 determines its role in transcription and cellular homeostasis

scientific article published on 02 March 2021

Comprehensive Proteomic Analysis of Human Pancreatic Juice

article

Computational approach for identification and characterization of GPI-anchored peptides in proteomics experiments

scientific article published on 01 June 2007

Correlation of acidic and basic carrier ampholyte and immobilized pH gradient two-dimensional gel electrophoresis patterns based on mass spectrometric protein identification.

scientific article

Database-independent, database-dependent, and extended interpretation of peptide mass spectra in VEMS V2.0.

scientific article published in September 2004

Depletion of Abundant Plasma Proteins by Poly(N-isopropylacrylamide-acrylic acid) Hydrogel Particles

scientific article published on 15 January 2014

Detection and differentiation of 22 kDa and 20 kDa Growth Hormone proteoforms in human plasma by LC-MS/MS.

scientific article published on 30 December 2014

Development of human protein reference database as an initial platform for approaching systems biology in humans

scientific article (publication date: October 2003)

Development of novel monoclonal antibodies that define differentiation stages of human stromal (mesenchymal) stem cells

scientific article published on 23 May 2011

Differential Ion Mobility Separations/Mass Spectrometry with High Resolution in Both Dimensions

scientific article published on 27 December 2018

Differential expression profiling of membrane proteins by quantitative proteomics in a human mesenchymal stem cell line undergoing osteoblast differentiation

scientific article

Distinct Roles of Two Histone Methyltransferases in Transmitting H3K36me3-Based Epigenetic Memory Across Generations in

article

Distinction between human cytochrome P450 (CYP) isoforms and identification of new phosphorylation sites by mass spectrometry

scientific article published on 2 October 2008

Disulfiram generates a stable N,N-diethylcarbamoyl adduct on Cys-125 of rat hemoglobin beta-chains in vivo

scientific article published on 01 April 2000

Dynamic changes of histone H3 marks during Caenorhabditis elegans lifecycle revealed by middle-down proteomics

scientific article published on 28 October 2015

Dynamic histone H3 epigenome marking during the intraerythrocytic cycle of Plasmodium falciparum

scholarly article

EZH2 is a potential therapeutic target for H3K27M-mutant pediatric gliomas

scientific article published on 27 February 2017

Effects of elaidic acid on lipid metabolism in HepG2 cells, investigated by an integrated approach of lipidomics, transcriptomics and proteomics

scientific article

Efficient isolation and quantitative proteomic analysis of cancer cell plasma membrane proteins for identification of metastasis-associated cell surface markers.

scientific article published on June 2009

Electron capture dissociation of singly and multiply phosphorylated peptides

scientific article published on 01 January 2000

Electron transfer dissociation facilitates the measurement of deuterium incorporation into selectively labeled peptides with single residue resolution

scientific article

Enrichment and Identification of Integral Membrane Proteins from Barley Aleurone Layers by Reversed-Phase Chromatography, SDS-PAGE, and LC−MS/MS

scientific article published on 01 November 2006

Enrichment and separation of mono- and multiply phosphorylated peptides using sequential elution from IMAC prior to mass spectrometric analysis

scientific article published on January 2009

EuPA achieves visibility - an activity report on the first three years.

scientific article published on 8 April 2008

Evaluation of sample preparation methods for mass spectrometry-based proteomic analysis of barley leaves

scientific article published on 25 August 2018

Extensive Characterization of Heavily Modified Histone Tails by 193 nm Ultraviolet Photodissociation Mass Spectrometry via a Middle–Down Strategy

scientific article published on 16 August 2018

FBXO22 protein is required for optimal synthesis of the N-methyl-D-aspartate (NMDA) receptor coagonist D-serine

scientific article

FlashPack: Fast and simple preparation of ultra-high performance capillary columns for LC-MS

scientific article published on 29 October 2018

Functional Heterogeneity within the CD44 High Human Breast Cancer Stem Cell-Like Compartment Reveals a Gene Signature Predictive of Distant Metastasis ⬇️

scientific article published on September 25, 2012

Functional domain analysis of the Remorin protein LjSYMREM1 in Lotus japonicus

scientific article

Functional proteomics in histone research and epigenetics.

scientific article published on August 2007

Functional proteomics of barley and barley chloroplasts - strategies, methods and perspectives

scientific article published on 18 March 2013

Global histone analysis by mass spectrometry reveals a high content of acetylated lysine residues in the malaria parasite Plasmodium falciparum

scientific article

Global mass spectrometry and transcriptomics array based drug profiling provides novel insight into glucosamine induced endoplasmic reticulum stress

scientific article

Glycopeptide profiling of beta-2-glycoprotein I by mass spectrometry reveals attenuated sialylation in patients with antiphospholipid syndrome

scientific article published on 23 August 2009

Grp78 Is Involved in Retention of Mutant Low Density Lipoprotein Receptor Protein in the Endoplasmic Reticulum

scientific article published in Journal of Biological Chemistry

H3K23me2 is a new heterochromatic mark in Caenorhabditis elegans

scientific article published on 17 October 2015

High-Resolution Differential Ion Mobility Separations/Orbitrap Mass Spectrometry without Buffer Gas Limitations

scientific article published on 09 May 2019

High-performance hybrid Orbitrap mass spectrometers for quantitative proteome analysis: Observations and implications

article

Highly Efficient Phosphopeptide Enrichment by Calcium Phosphate Precipitation Combined with Subsequent IMAC Enrichment

scientific article

Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns.

scientific article

Highly selective enrichment of phosphorylated peptides using titanium dioxide

scientific article published on 01 January 2006

How many human proteoforms are there?

scientific article published in February 2018

Human Proteinpedia enables sharing of human protein data

scientific article

Identification and Characterization of N-Glycosylated Proteins Using Proteomics

Identification and characterization of PaMTH1, a putative O-methyltransferase accumulating during senescence of Podospora anserina cultures.

scientific article

Identification and profiling of salinity stress-responsive proteins in Sorghum bicolor seedlings.

scientific article

Identification of a potential biomarker panel for the intake of the common dietary trans fat elaidic acid (trans∆9-C18:1).

scientific article

Identification of ischemia-regulated phosphorylation sites in connexin43: A possible target for the antiarrhythmic peptide analogue rotigaptide (ZP123).

scientific article published on 5 May 2006

Identification of markers associated with highly aggressive metastatic phenotypes using quantitative comparative proteomics

scientific article

Identification of proteins in the postsynaptic density fraction by mass spectrometry

scientific article (publication date: June 2000)

Identification of salt-tolerant Sinorhizobium sp. strain BL3 membrane proteins based on proteomics

scientific article

In-depth analysis of the secretome identifies three major independent secretory pathways in differentiating human myoblasts

article

Insulin increases phosphorylation of mitochondrial proteins in human skeletal muscle in vivo

scientific article published on 28 March 2014

Integrated solid-phase extraction-capillary liquid chromatography (speLC) interfaced to ESI-MS/MS for fast characterization and quantification of protein and proteomes.

scientific article

Integration of gel-based proteome data with pProRep.

scientific article

Interpreting the protein language using proteomics.

scientific article

Isocratic Solid Phase Extraction-Liquid Chromatography (SPE-LC) Interfaced to High-Performance Tandem Mass Spectrometry for Rapid Protein Identification

scientific article published on 26 June 2008

Isolation and characterization of glycosylphosphatidylinositol-anchored peptides by hydrophilic interaction chromatography and MALDI tandem mass spectrometry

scientific article published in May 2006

KYSS: mass spectrometry data quality assessment for protein analysis and large-scale proteomics.

scientific article

Large scale analysis of co-existing post-translational modifications in histone tails reveals global fine structure of cross-talk

scientific article

Large-scale Analysis ofin VivoPhosphorylated Membrane Proteins by Immobilized Metal Ion Affinity Chromatography and Mass Spectrometry

article

Linear and Differential Ion Mobility Separations of Middle-Down Proteoforms.

scientific article published on 23 January 2018

LmxMPK4, an essential mitogen-activated protein kinase of Leishmania mexicana is phosphorylated and activated by the STE7-like protein kinase LmxMKK5.

scientific article published on 21 February 2010

Loss of Ammonia during Electron-Transfer Dissociation of Deuterated Peptides as an Inherent Gauge of Gas-Phase Hydrogen Scrambling

scientific article published on 29 October 2010

MALDI MS peptide mapping performance by in-gel digestion on a probe with prestructured sample supports.

scientific article

Mapping of p140Cap phosphorylation sites: the EPLYA and EGLYA motifs have a key role in tyrosine phosphorylation and Csk binding, and are substrates of the Abl kinase

scientific article

Mass spectrometric analysis of a UV-cross-linked protein-DNA complex: tryptophans 54 and 88 of E. coli SSB cross-link to DNA

scientific article

Mass spectrometry and site-directed mutagenesis identify several autophosphorylated residues required for the activity of PrkC, a Ser/Thr kinase from Bacillus subtilis.

scientific article published on July 2003

Maximizing Sequence Coverage in Top-Down Proteomics By Automated Multimodal Gas-Phase Protein Fragmentation

scientific article published on 10 October 2018

Mechanism for activation of the growth factor-activated AGC kinases by turn motif phosphorylation

scientific journal article

Metastasis-related plasma membrane proteins of human breast cancer cells identified by comparative quantitative mass spectrometry.

scientific article published on 24 March 2009

Microbial stratification in low pH oxic and suboxic macroscopic growths along an acid mine drainage

scientific article

Middle-Down Proteomic Analyses with Ion Mobility Separations of Endogenous Isomeric Proteoforms

scientific article published on 17 January 2020

Middle-down hybrid chromatography/tandem mass spectrometry workflow for characterization of combinatorial post-translational modifications in histones

scientific article

Modification-specific proteomics in plant biology.

scientific article

Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol-anchored proteins released upon phospholipase D treatment.

scientific article published in April 2006

Modification-specific proteomics: characterization of post-translational modifications by mass spectrometry.

scientific article

Modulation of cell metabolic pathways and oxidative stress signaling contribute to acquired melphalan resistance in multiple myeloma cells

scientific article

Molecular architecture of transcription factor hotspots in early adipogenesis.

scientific article

Molecularly Imprinted Porous Monolithic Materials from Melamine-Formaldehyde for Selective Trapping of Phosphopeptides

scientific article

Monitoring the native phosphorylation state of plasma membrane proteins from a single mouse cerebellum

scientific article published on 13 December 2012

Mutant FOXL2C134W highjacks SMAD4 and SMAD2/3 to drive adult granulosa cell tumors

scientific article published on 08 July 2020

NADH-Cytochrome b5 Reductase 3 Promotes Colonization and Metastasis Formation and Is a Prognostic Marker of Disease-Free and Overall Survival in Estrogen Receptor-Negative Breast Cancer

scientific article

NetPhosYeast: prediction of protein phosphorylation sites in yeast

scientific article published on 5 February 2007

New insights in osteogenic differentiation revealed by mass spectrometric assessment of phosphorylated substrates in murine skin mesenchymal cells

scientific article

Nuclear phosphoproteome analysis of 3T3-L1 preadipocyte differentiation reveals system-wide phosphorylation of transcriptional regulators

scientific article published on 26 September 2016

Optimized IMAC-IMAC protocol for phosphopeptide recovery from complex biological samples

scientific article published in July 2010

Optimized preparation of urine samples for two-dimensional electrophoresis and initial application to patient samples.

scientific article published in November 2002

Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics.

scientific article published on 18 December 2017

Organization of proteomics data with YassDB.

scientific article

PRMT5 methylome profiling uncovers a direct link to splicing regulation in acute myeloid leukemia

scientific article published on 14 October 2019

PTB-associated splicing factor (PSF) functions as a repressor of STAT6-mediated Ig epsilon gene transcription by recruitment of HDAC1

scientific article published on 24 November 2010

Peptide sequencing and characterization of post-translational modifications by enhanced ion-charging and liquid chromatography electron-transfer dissociation tandem mass spectrometry.

scientific article published on 17 November 2007

Phosphopeptide detection and sequencing by matrix-assisted laser desorption/ionization quadrupole time-of-flight tandem mass spectrometry.

scientific article

Phosphoproteome analysis of Streptomyces development reveals extensive protein phosphorylation accompanying bacterial differentiation

scientific article published on 3 November 2011

Phosphoproteomics in Microbiology: Protocols for Studying Streptomyces coelicolor Differentiation

scientific article published on 01 January 2018

Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database

scientific article

Phosphoric acid as a matrix additive for MALDI MS analysis of phosphopeptides and phosphoproteins.

scientific article published in September 2004

Phosphorylation of Formate Dehydrogenase in Potato Tuber Mitochondria ⬇️

scientific article published on April 24, 2003

Phosphorylation of JAK2 at serine 523: a negative regulator of JAK2 that is stimulated by growth hormone and epidermal growth factor.

scientific article published on June 2006

Phosphorylation of both nucleoplasmin domains is required for activation of its chromatin decondensation activity

scientific article

Phosphorylation of mouse serine racemase regulates D-serine synthesis.

scientific article

Phosphorylation of the alpha-I motif in SYMRK drives root nodule organogenesis

scientific article published in 2024

Phosphosite mapping of P-type plasma membrane H+-ATPase in homologous and heterologous environments

scientific article published on 15 December 2011

Phosphotyrosine Biased Enrichment of Tryptic Peptides from Cancer Cells by Combining pY-MIP and TiO2 Affinity Resins

scientific article published on 3 October 2017

Plasmin in nephrotic urine activates the epithelial sodium channel

scientific article

Plasminogen-independent initiation of the pro-urokinase activation cascade in vivo. Activation of pro-urokinase by glandular kallikrein (mGK-6) in plasminogen-deficient mice

scientific article published on 01 January 2000

PolySTest: Robust statistical testing of proteomics data with missing values improves detection of biologically relevant features

scientific article published on 18 May 2020

Precision mapping of coexisting modifications in histone H3 tails from embryonic stem cells by ETD-MS/MS.

scientific article published on 16 August 2013

Promoting Proteomics Knowledge in Europe

scientific article published on 01 September 2007

Protein hydrogen exchange measured at single-residue resolution by electron transfer dissociation mass spectrometry.

scientific article

Protein kinase A phosphorylates serine 267 in the homeodomain of engrailed-2 leading to decreased DNA binding

scientific article

Proteomic Analysis of Glycosylphosphatidylinositol-anchored Membrane Proteins

article

Proteomic analysis of GPI-anchored membrane proteins

scientific article published on 01 January 2006

Proteomic changes and endophytic micromycota during storage of organically and conventionally grown carrots

Proteomic comparison between maturation drying and prematurely imposed drying of Zea mays seeds reveals a potential role of maturation drying in preparing proteins for seed germination, seedling vigor, and pathogen resistance.

scientific article published on 27 December 2013

Proteomics and the dynamic plasma membrane: Quo Vadis? ⬇️

scientific article published on November 2, 2010

Proteomics identifies molecular networks affected by tetradecylthioacetic acid and fish oil supplemented diets

Proteomics in Chromatin Biology and Epigenetics

scientific article published on 01 October 2014

Proteomics in chromatin biology and epigenetics: Elucidation of post-translational modifications of histone proteins by mass spectrometry

scientific article published on 03 January 2012

Quantitation of Multisite EGF Receptor Phosphorylation Using Mass Spectrometry and a Novel Normalization Approach

Quantitative Proteome and Phosphoproteome Analyses of Reveal Proteins and Phosphoproteins Modulating Differentiation and Secondary Metabolism

scholarly article by Beatriz Rioseras published in August 2018

Quantitative analysis of proteome and lipidome dynamics reveals functional regulation of global lipid metabolism.

scientific article published in March 2015

Quantitative assessment of in-solution digestion efficiency identifies optimal protocols for unbiased protein analysis

scientific article published on 21 June 2013

Quantitative mass spectrometry of histones H3.2 and H3.3 in Suz12-deficient mouse embryonic stem cells reveals distinct, dynamic post-translational modifications at Lys-27 and Lys-36

scientific article

Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway

scientific article published on 22 January 2005

Quantitative phosphoproteomics of tomato mounting a hypersensitive response reveals a swift suppression of photosynthetic activity and a differential role for hsp90 isoforms

scientific article

Quantitative profiling of PE, MMPE, DMPE, and PC lipid species by multiple precursor ion scanning: A tool for monitoring PE metabolism

article

Quantitative proteome analysis of Streptomyces coelicolor Nonsporulating liquid cultures demonstrates a complex differentiation process comparable to that occurring in sporulating solid cultures.

scientific article published on September 2010

Quantitative proteomics analysis of Streptomyces coelicolor development demonstrates that onset of secondary metabolism coincides with hypha differentiation.

scientific article

Quantitative proteomics by 2DE and MALDI MS/MS uncover the effects of organic and conventional cropping methods on vegetable products.

scientific article

Quantitative proteomics identifies Gemin5, a scaffolding protein involved in ribonucleoprotein assembly, as a novel partner for eukaryotic initiation factor 4E

scientific article

Quantitative proteomics of primary tumors with varying metastatic capabilities using stable isotope-labeled proteins of multiple histogenic origins

scientific article published on 18 June 2012

Reproducibility of mass spectrometry based protein profiles for diagnosis of breast cancer across clinical studies: a systematic review

scientific article published on 28 February 2008

Reproducibility of serum protein profiling by systematic assessment using solid-phase extraction and matrix-assisted laser desorption/ionization mass spectrometry

scientific article

SET8 is degraded via PCNA-coupled CRL4(CDT2) ubiquitylation in S phase and after UV irradiation ⬇️

scientific article

SIMAC (sequential elution from IMAC), a phosphoproteomics strategy for the rapid separation of monophosphorylated from multiply phosphorylated peptides

scientific article

Selective Enrichment of Phosphorylated Peptides by Monolithic Polymers Surface Imprinted with bis-Imidazolium Moieties by UV-Initiated Cryopolymerization

scientific article published on 08 July 2019

Selective extraction of phospholipids from dairy products by micro-solid phase extraction based on titanium dioxide microcolumns followed by MALDI-TOF-MS analysis

scientific article

Sequence handling by sequence analysis toolbox v1.0.

scientific article published in January 2007

Serum peptide/protein profiling by mass spectrometry provides diagnostic information independently of CA125 in women with an ovarian tumor

scientific article

Serum protein profiling by miniaturized solid-phase extraction and matrix-assisted laser desorption/ionization mass spectrometry

scientific article published in January 2005

Serum protein profiling by solid phase extraction and mass spectrometry: a future diagnostics tool?

scientific article

Shotgun lipidomic analysis of chemically sulfated sterols compromises analytical sensitivity: Recommendation for large-scale global lipidome analysis.

scientific article published on 29 October 2014

Simplified sample preparation method for protein identification by matrix-assisted laser desorption/ionization mass spectrometry: In-gel digestion on the probe surface ⬇️

scientific article published on August 1, 2001

Spatially resolved protein hydrogen exchange measured by subzero-cooled chip-based nanoelectrospray ionization tandem mass spectrometry.

scientific article published on 26 April 2012

Structural analysis and tissue localization of human C4.4A: a protein homologue of the urokinase receptor

scientific article

Subcompartmentalization by cross-membranes during early growth of Streptomyces hyphae

scientific article

Systems Level Analysis of Histone H3 Post-translational Modifications (PTMs) Reveals Features of PTM Crosstalk in Chromatin Regulation

scientific article published on 14 June 2016

Targeted mass spectrometry analysis of the proteins IGF1, IGF2, IBP2, IBP3 and A2GL by blood protein precipitation

article

The C. elegans H3K27 demethylase UTX-1 is essential for normal development, independent of its enzymatic activity

scientific article (publication date: 2012)

The Emery-Dreifuss muscular dystrophy associated-protein emerin is phosphorylated on serine 49 by protein kinase A.

scientific article published in October 2006

The Hypoxic Proteome and Metabolome of Barley (Hordeum vulgare L.) with and without Phytoglobin Priming

scientific article published on 24 February 2020

The Tumor Suppressor CIC Directly Regulates MAPK Pathway Genes via Histone Deacetylation

article

The Tyrosine Phosphatase Shp2 Interacts with NPM-ALK and Regulates Anaplastic Lymphoma Cell Growth and Migration

scientific article published on 01 May 2007

The effect of phytoglobin overexpression on the plant proteome during nonhost response of barley (Hordeum vulgare) to wheat powdery mildew (Blumeria graminis f. sp. tritici)

scientific article published on 08 June 2020

The histone methyltransferase SET8 is required for S-phase progression

scientific article published on December 2007

The human oral metaproteome reveals potential biomarkers for caries disease.

scientific article

The origins of enhanced activity in factor VIIa analogs and the interplay between key allosteric sites revealed by hydrogen exchange mass spectrometry.

scientific article

The plasma membrane proteome of germinating barley embryos.

scientific article published in July 2009

The potato tuber mitochondrial proteome

scientific article published on 18 December 2013

The pseudokinase domain of JAK2 is a dual-specificity protein kinase that negatively regulates cytokine signaling ⬇️

scientific article published on August 14, 2011

The vacuolar V1/V0-ATPase is involved in the release of the HOPS subunit Vps41 from vacuoles, vacuole fragmentation and fusion

scientific article published on 9 April 2008

Three v-SNAREs and two t-SNAREs, present in a pentameric cis-SNARE complex on isolated vacuoles, are essential for homotypic fusion.

scientific article

TiO(2)-based phosphoproteomic analysis of the plasma membrane and the effects of phosphatase inhibitor treatment

scientific article

Time-resolved Quantitative Proteome Analysis of In Vivo Intestinal Development ⬇️

scientific article published on December 29, 2010

Tissue specific phosphorylation of mitochondrial proteins isolated from rat liver, heart muscle, and skeletal muscle

scientific article published on 13 September 2013

Top-down and Middle-down Protein Analysis Reveals that Intact and Clipped Human Histones Differ in Post-translational Modification Patterns

scientific article published on 30 September 2015

Tousled-like kinases phosphorylate Asf1 to promote histone supply during DNA replication.

scientific article published on 06 March 2014

Transcription factor cooperativity in early adipogenic hotspots and super-enhancers.

scientific article

Transcriptional co-activator protein p100 interacts with snRNP proteins and facilitates the assembly of the spliceosome

scientific article published on 18 June 2007

Transfer-messenger RNA controls the translation of cell-cycle and stress proteins in Streptomyces

scientific article published on 18 December 2009

Tumor suppressor ASXL1 is essential for the activation of INK4B expression in response to oncogene activity and anti-proliferative signals

scientific article

Two distinct modes for propagation of histone PTMs across the cell cycle

scientific article

Utility of immonium ions for assignment of epsilon-N-acetyllysine-containing peptides by tandem mass spectrometry.

scientific article

VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.

scientific article

VSClust: Feature-based variance-sensitive clustering of omics data.

scientific article published on 9 April 2018

WAVE regulatory complex activation by cooperating GTPases Arf and Rac1

scientific article

Zirconium(IV)-IMAC Revisited: Improved Performance and Phosphoproteome Coverage by Magnetic Microparticles for Phosphopeptide Affinity Enrichment

scientific article published on 23 November 2020

β2-Syntrophin is a Cdk5 substrate that restrains the motility of insulin secretory granules

scientific article

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