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List of works by Juan Fernando Alzate

16S rRNA gene amplicon sequencing reveals dominance of Actinobacteria in Rhodnius pallescens compared to Triatoma maculata midgut microbiota in natural populations of vector insects from Colombia.

scientific article

Annual microbial community dynamics in a full-scale anaerobic sludge digester from a wastewater treatment plant in Colombia

scientific article published on 11 April 2020

Apoptotic markers in protozoan parasites

scientific article

Biodegradation of biodiesel-oil by Cellulosimicrobium sp. Isolated from Colombian Caribbean soils

scientific article published on 31 December 2018

Biotechnological production, characterization and in vitro antitumor activity of polysaccharides from a native strain of Lentinus crinitus

scientific article published on 26 August 2020

CLAME: a new alignment-based binning algorithm allows the genomic description of a novel Xanthomonadaceae from the Colombian Andes

scientific article published on 11 December 2018

Comparative Transcriptome Analysis of Streptomyces Clavuligerus in Response to Favorable and Restrictive Nutritional Conditions

scientific article published on 19 July 2019

Comparison of Brucella canis genomes isolated from different countries shows multiple variable regions.

scientific article published on 24 March 2015

Complete genome sequence of a novel potato virus S strain infecting Solanum phureja in Colombia

scientific article published on 12 May 2013

Complete genome sequence of an isolate of Potato virus X (PVX) infecting Cape gooseberry (Physalis peruviana) in Colombia

scientific article published on 14 February 2015

Complete mitochondrial genome of the Neotropical catfish Pseudoplatystoma magdaleniatum (Siluriformes, Pimelodidae).

scientific article published on 28 January 2015

Complete mitochondrial genome sequence of Grundulus bogotensis (Humboldt, 1821).

scientific article published on 18 November 2014

Complete mitochondrial genome sequence of the common bean anthracnose pathogen Colletotrichum lindemuthianum

scientific article published on 22 January 2014

Complete mitogenome of the Neotropical fish Brycon henni, Eigenmann 1913 (Characiformes, Bryconidae).

scientific article

Contrasting microbiota profiles observed in children carrying either Blastocystis spp. or the commensal amoebas Entamoeba coli or Endolimax nana

scientific article published on 18 September 2020

Cryptosporidium hominis Phylogenomic Analysis Reveals Separate Lineages With Continental Segregation

scientific article published on 14 October 2021

De novo assembly and characterization of the liver transcriptome of Mugil incilis (lisa) using next generation sequencing

scientific article published on 18 August 2020

Deep sequencing reveals the complete genome and evidence for transcriptional activity of the first virus-like sequences identified in Aristotelia chilensis (Maqui Berry).

scientific article

Diagnosis of cutaneous leishmaniasis in Colombia: the sampling site within lesions influences the sensitivity of parasitologic diagnosis.

scientific article published on October 2000

Diagnosis of human and canine Brucella canis infection: development and evaluation of indirect enzyme-linked immunosorbent assays using recombinant Brucella proteins

scientific article published on 11 July 2020

Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family

scientific article published on 01 December 2019

Dual RNA Sequencing of Mycobacterium tuberculosis-Infected Human Splenic Macrophages Reveals a Strain-Dependent Host–Pathogen Response to Infection

scientific article published in 2022

Early-Onset Invasive Infection Due to Corynespora cassiicola Associated with Compound Heterozygous CARD9 Mutations in a Colombian Patient

scientific article published on 28 September 2018

Edelfosine induces an apoptotic process in Leishmania infantum that is regulated by the ectopic expression of Bcl-XL and Hrk.

scientific article published on 21 July 2008

Establishment and characterization of a competitive exclusion bacterial culture derived from Nile tilapia (Oreochromis niloticus) gut microbiomes showing antibacterial activity against pathogenic Streptococcus agalactiae

article

Evolution and Expression Patterns of TCP Genes in Asparagales.

scientific article published on 17 January 2017

Evolution of RADIALIS and DIVARICATA gene lineages in flowering plants with an expanded sampling in non-core eudicots

scientific article published on 07 March 2019

Genome microsatellite diversity within the Apicomplexa phylum

scientific article published on 2 September 2016

Genome sequence of a virus isolate from tamarillo (Solanum betaceum) in Colombia: evidence for a new potyvirus

scientific article

Genomic Analysis of Colombian Leishmania panamensis strains with different level of virulence

scientific article published in Scientific Reports

Heat-induced programmed cell death in Leishmania infantum is reverted by Bcl-X(L) expression

scientific article published on 01 February 2006

Improvement of the green fluorescent protein reporter system in Leishmania spp. for the in vitro and in vivo screening of antileishmanial drugs

scientific article

Inherited p40phox deficiency differs from classic chronic granulomatous disease

scientific article published on 06 August 2018

Insights into the phosphatidylcholine and phosphatidylethanolamine biosynthetic pathways in Leishmania parasites and characterization of a choline kinase from Leishmania infantum.

scientific article

Intestinal parasitic infection alters bacterial gut microbiota in children

scientific article published on 07 January 2019

Leishmania (Viannia) panamensis: cloning of the histone H1 genes by representational difference analysis

scientific article

Leishmania infantum EndoG is an endo/exo-nuclease essential for parasite survival

scientific article

Leishmania infantum expresses a mitochondrial nuclease homologous to EndoG that migrates to the nucleus in response to an apoptotic stimulus

scientific article published on 2 October 2008

Metagenomic Analysis of Biocide-Treated Neotropical Oil Reservoir Water Unveils Microdiversity of Thermophile <i>Tepidiphilus</i>

scientific article published on 01 November 2021

Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758).

scientific article published on 15 February 2018

Metagenomic assessment of the microbial community and methanogenic pathways in biosolids from a municipal wastewater treatment plant in Medellín, Colombia

scientific article published on 11 August 2018

Mitochondrial genome of the Caribbean king crab Damithrax spinosissimus (Lamarck, 1818) (Decapoda: Majidae).

scientific article published on 22 September 2014

Mitochondrial genome of the Neotropical catfish Ageneiosus pardalis, Lütken 1874 (Siluriformes, Auchenipteridae).

scientific article

Mitochondrial genome of the Neotropical detritivore fish Curimata mivartii Steindachner 1878 (Characiformes, Curimatidae).

scientific article

Mitochondrial genome of the Neotropical trans-Andean fish Ichthyoelephas longirostris, Steindachner 1879 (Characiformes, Prochilodontidae).

scientific article

Mitochondrial genome of the Trans-Andean shovelnose catfish Sorubim cuspicaudus (Siluriformes, Pimelodidae).

scientific article published on 26 December 2014

Mitochondrial genome of the blackfin tuna Thunnus atlanticus Lesson, 1831 (Perciformes, Scrombidae).

scientific article published on 30 September 2014

Mitochondrial genome of the endangered marine gastropod Strombus gigas Linnaeus, 1758 (Mollusca: Gastropoda).

scientific article

Mitochondrial genome sequence of the potato powdery scab pathogen Spongospora subterranea

scientific article published on 17 January 2014

Mitochondrial genomics of human pathogenic parasite Leishmania (Viannia) panamensis

scientific article published on 02 July 2019

Mitochondrial superoxide mediates heat-induced apoptotic-like death in Leishmania infantum

scientific article published on 09 January 2007

Molecular Identification and Antifungal Susceptibility of Clinical Isolates of Sporothrix schenckii Complex in Medellin, Colombia

scientific article published on 15 December 2018

Molecular differentiation of Anopheles (Nyssorhynchus) benarrochi and An. (N.) oswaldoi from southern Colombia.

scientific article published on April 2005

Plastome reduction and gene content in New World Pilostyles (Apodanthaceae) unveils high similarities to African and Australian congeners

scientific article published on 23 March 2019

Probing the dimerization interface of Leishmania infantum trypanothione reductase with site-directed mutagenesis and short peptides

scientific article published on 6 June 2013

Production and evaluation of the recombinant antigen TES-30 of Toxocara canis for the immunodiagnosis of toxocariasis

scientific article

Revisiting the reference genomes of human pathogenic Cryptosporidium species: reannotation of C. parvum Iowa and a new C. hominis reference

scientific article

The Orphan Response Regulator Aor1 Is a New Relevant Piece in the Complex Puzzle of Streptomyces coelicolor Antibiotic Regulatory Network

scientific article published on 12 December 2017

The developmental and genetic bases of apetaly in Bocconia frutescens (Chelidonieae: Papaveraceae).

scientific article published on 2 August 2016

The gene encoding the metacyclogenesis-associated transcript Mat-1 is conserved in the genus Leishmania and shows a tendency to form dimers upon protein expression

scientific article published on May 2000

The method used to sample ulcers influences the diagnosis of cutaneous leishmaniasis

scientific article published on 01 April 2002

Transcriptome profiling of the cysticercus stage of the laboratory model Taenia crassiceps, strain ORF.

scientific article

Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis

scientific article published in 2024

Whole genome shotgun sequencing of one Colombian clinical isolate of Mycobacterium tuberculosis reveals DosR regulon gene deletions.

scientific article published on 28 March 2012

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