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List of works by Fabio Luciani

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Sequential bottlenecks drive viral evolution in early acute hepatitis C virus infection

scientific article
GemSIM: general, error-model based simulator of next-generation sequencing data

scientific article
The epidemiological fitness cost of drug resistance in Mycobacterium tuberculosis.

scholarly article
Contribution of intra- and interhost dynamics to norovirus evolution

scientific article published on 28 December 2011
Epidemiological and clinical consequences of within-host evolution

scientific article
Incidence of primary hepatitis C infection and risk factors for transmission in an Australian prisoner cohort

scientific article published on 22 October 2010
Effects and interactions in an environmentally relevant mixture of pharmaceuticals

scientific article published on 28 November 2007
Using approximate Bayesian computation to estimate tuberculosis transmission parameters from genotype data

scientific article
spolTools: online utilities for analyzing spoligotypes of the Mycobacterium tuberculosis complex

scientific article published on 18 August 2008
Short duration of lamivudine for the prevention of hepatitis B virus transmission in pregnancy: lack of potency and selection of resistance mutations.

scientific article published on 11 December 2013
Inhibitors of the Hepatitis C Virus Polymerase; Mode of Action and Resistance

scientific article published on September 29, 2015
Next generation deep sequencing and vaccine design: today and tomorrow

scientific article published on 20 June 2012
A prospective study of hepatitis C incidence in Australian prisoners

scientific article published on 15 July 2014
Accurate single nucleotide variant detection in viral populations by combining probabilistic clustering with a statistical test of strand bias

scientific article
Viral quasispecies assembly via maximal clique enumeration

scientific article (publication date: March 2014)
Modeling the in vitro 20S proteasome activity: the effect of PA28-alphabeta and of the sequence and length of polypeptides on the degradation kinetics

scientific article published on 8 February 2008
The Evolutionary Dynamics of a Rapidly Mutating Virus within and between Hosts: The Case of Hepatitis C Virus

scientific article (publication date: November 2009)
Current understanding on the role of standard and immunoproteasomes in inflammatory/immunological pathways of multiple sclerosis

scientific article published on 02 January 2014
Naturally occurring dominant drug resistance mutations occur infrequently in the setting of recently acquired hepatitis C.

scientific article
Transmitted/Founder Viruses Rapidly Escape from CD8+ T Cell Responses in Acute Hepatitis C Virus Infection

scientific article published on 4 March 2015
A mathematical model of protein degradation by the proteasome

scientific article published on 21 January 2005
Increasing viral dose causes a reversal in CD8+ T cell immunodominance during primary influenza infection due to differences in antigen presentation, T cell avidity, and precursor numbers.

scientific article
Resistance to hepatitis C virus: potential genetic and immunological determinants.

scientific article
Interpreting genotype cluster sizes of Mycobacterium tuberculosis isolates typed with IS6110 and spoligotyping

scientific article published on 01 February 2008
Single nucleotide polymorphism array profiling identifies distinct chromosomal aberration patterns across colorectal adenomas and carcinomas

scientific article
Trade-offs in resource allocation in the intracellular life-cycle of hepatitis C virus

scientific article published on 29 September 2010
Per-Event Probability of Hepatitis C Infection during Sharing of Injecting Equipment

scientific article published on July 7, 2014
Exploration of genetically determined resistance against hepatitis C infection in high-risk injecting drug users.

scientific article published on 26 February 2014
HIV infection and hepatitis C virus genotype 1a are associated with phylogenetic clustering among people with recently acquired hepatitis C virus infection.

scientific article published on 26 November 2015
A stochastic model for CD8(+)T cell dynamics in human immunosenescence: implications for survival and longevity

article
A bioinformatics pipeline for the analyses of viral escape dynamics and host immune responses during an infection

scientific article
Evidence that hepatitis C virus genome partly controls infection outcome.

scientific article
Exploring and analysing single cell multi-omics data with VDJView

scientific article published on 18 February 2020

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