List of works - Bernhard Radlwimmer

A chromosome 8 gene-cluster polymorphism with low human beta-defensin 2 gene copy number predisposes to Crohn disease of the colon

scientific article

A gene signature distinguishing CD133hi from CD133- colorectal cancer cells: essential role for EGR1 and downstream factors

scientific article published on April 2011

Adaptive evolution of color vision of the Comoran coelacanth (Latimeria chalumnae)

scientific article

An endogenous tumour-promoting ligand of the human aryl hydrocarbon receptor

scientific article

Angiocentric glioma: report of clinico-pathologic and genetic findings in 8 cases

scientific article

Apoptosis-based treatment of glioblastomas with ABT-737, a novel small molecule inhibitor of Bcl-2 family proteins

scientific article

Array-CGH in unclear syndromic nephropathies identifies a microdeletion in Xq22.3-q23.

scientific article published on 15 May 2009

Array-based profiling of reference-independent methylation status (aPRIMES) identifies frequent promoter methylation and consecutive downregulation of ZIC2 in pediatric medulloblastoma

scientific article published on 7 March 2007

Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes

scientific article

Author Correction: BCAT1 restricts αKG levels in AML stem cells leading to IDH-like DNA hypermethylation

scientific article published in Nature

Author Correction: BCAT1 restricts αKG levels in AML stem cells leading to IDHmut-like DNA hypermethylation

scientific article published in Nature

Automated array-based genomic profiling in chronic lymphocytic leukemia: development of a clinical tool and discovery of recurrent genomic alterations

scientific article

BCAT1 promotes cell proliferation through amino acid catabolism in gliomas carrying wild-type IDH1.

scientific article published on 23 June 2013

BCAT1 restricts αKG levels in AML stem cells leading to IDHmut-like DNA hypermethylation

scientific article published on 8 November 2017

BRAF gene duplication constitutes a mechanism of MAPK pathway activation in low-grade astrocytomas

scientific article published on May 2008

Branched-chain ketoacids secreted by glioblastoma cells via MCT1 modulate macrophage phenotype

scientific article

Candidate genes in breast cancer revealed by microarray-based comparative genomic hybridization of archived tissue.

scientific article published on January 2005

Cloning and expression of the red visual pigment gene of goat (Capra hircus).

scientific article published in October 1997

Co-localization of CENP-C and CENP-H to discontinuous domains of CENP-A chromatin at human neocentromeres

scientific article published on January 2007

Comprehensive characterization of genomic aberrations in gangliogliomas by CGH, array-based CGH and interphase FISH.

scientific article

Comprehensive genomic analysis of desmoplastic medulloblastomas: identification of novel amplified genes and separate evaluation of the different histological components

scientific article

Copy number alterations in childhood acute lymphoblastic leukemia and their association with minimal residual disease

DNA dot-blot hybridization implicates human papillomavirus type 11-DNA in epithelioma cuniculatum

scientific article published on 01 September 1989

DNA methylation-based classification of central nervous system tumours

scientific article published on 14 March 2018

DNA methylome analysis in Burkitt and follicular lymphomas identifies differentially methylated regions linked to somatic mutation and transcriptional control

scientific article

DNA microarray analysis identifies candidate regions and genes in unexplained mental retardation

scientific article published on March 2007

De-repression of CTGF via the miR-17-92 cluster upon differentiation of human glioblastoma spheroid cultures

scientific article

Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing

scientific article

Decreased expression of the mitochondrial BCAT protein correlates with improved patient survival in IDH-WT gliomas.

scientific article

Detection of chromosomal imbalances in retinoblastoma by matrix-based comparative genomic hybridization

scientific article

Differential retinoic acid signaling in tumors of long- and short-term glioblastoma survivors

scientific article published on 23 February 2011

Differentiation therapy exerts antitumor effects on stem-like glioma cells

scientific article published on 4 May 2010

Disclosure of Candidate Genes in Acute Myeloid Leukemia With Complex Karyotypes Using Microarray-Based Molecular Characterization

EEF1A2 inactivates p53 by way of PI3K/AKT/mTOR-dependent stabilization of MDM4 in hepatocellular carcinoma

scientific article

Epigenetic upregulation of lncRNAs at 13q14.3 in leukemia is linked to the In Cis downregulation of a gene cluster that targets NF-kB.

scientific article

Establishment, characterization and drug sensitivity testing in primary cultures of human thymoma and thymic carcinoma.

scientific article

Etiology-dependent molecular mechanisms in human hepatocarcinogenesis

scientific article published on February 2008

Expansive growth of two glioblastoma stem-like cell lines is mediated by bFGF and not by EGF.

scientific article published on 08 October 2013

Expression of an ASCL2 related stem cell signature and IGF2 in colorectal cancer liver metastases with 11p15.5 gain.

scientific article published on 17 May 2010

Expression of podoplanin in human astrocytic brain tumors is controlled by the PI3K-AKT-AP-1 signaling pathway and promoter methylation

scientific article published on 6 March 2012

FARP2, HDLBP and PASK are downregulated in a patient with autism and 2q37.3 deletion syndrome

scholarly article by Bärbel Felder et al published 13 April 2009 in American Journal of Medical Genetics

Frequent amplifications and abundant expression of TRIO, NKD2, and IRX2 in soft tissue sarcomas

scientific article

Frequent loss of chromosome 9, homozygous CDKN2A/p14(ARF)/CDKN2B deletion and low TSC1 mRNA expression in pleomorphic xanthoastrocytomas

scientific article published on 7 August 2006

GE-07DNA METHYLATION IN MEDULLOBLASTOMA AND MOLECULAR DIAGNOSTICS OF BRAIN TUMORS.

scientific article published on 21 April 2015

Genetic analyses of the green visual pigments of rabbit (Oryctolagus cuniculus) and rat (Rattus norvegicus).

scientific article published in September 1998

Genome-wide analysis for micro-aberrations in familial exstrophy of the bladder using array-based comparative genomic hybridization

scientific article

Genomic DNA-chip hybridization in t(11;14)-positive mantle cell lymphomas shows a high frequency of aberrations and allows a refined characterization of consensus regions

scientific article published on 13 April 2004

Genomic DNA-chip hybridization reveals a higher incidence of genomic amplifications in pancreatic cancer than conventional comparative genomic hybridization and leads to the identification of novel candidate genes

scientific article published on July 2004

Genomic and expression profiling of glioblastoma stem cell-like spheroid cultures identifies novel tumor-relevant genes associated with survival

scientific article published on 27 October 2009

Genomic and protein expression profiling identifies CDK6 as novel independent prognostic marker in medulloblastoma

scientific article

Genomic and spectral analyses of long to middle wavelength-sensitive visual pigments of common marmoset (Callithrix jacchus).

scientific article

Genomic profiling reveals distinctive molecular relapse patterns in IDH1/2 wild-type glioblastoma.

scientific article

Gilvocarcin V exhibits both equilibrium DNA binding and UV light induced DNA adduct formation which is sequence context dependent

scientific article

Glioblastoma epigenome profiling identifies SOX10 as a master regulator of molecular tumour subtype

scientific article published on 18 December 2020

High-resolution genomic profiling of childhood T-ALL reveals frequent copy-number alterations affecting the TGF-beta and PI3K-AKT pathways and deletions at 6q15-16.1 as a genomic marker for unfavorable early treatment response

scientific article published on 30 April 2009

High-resolution genomic profiling reveals association of chromosomal aberrations on 1q and 16p with histologic and genetic subgroups of invasive breast cancer

scientific article

Hochauflösende genomische Analyse des HCC

Hotspot mutations in H3F3A and IDH1 define distinct epigenetic and biological subgroups of glioblastoma

scientific article published in October 2012

Identification of gains on 1q and epidermal growth factor receptor overexpression as independent prognostic markers in intracranial ependymoma

scientific article

Integrated DNA methylation and copy-number profiling identify three clinically and biologically relevant groups of anaplastic glioma

scientific article published on 10 July 2014

International network of cancer genome projects

scientific article

Isochromosome breakpoints on 17p in medulloblastoma are flanked by different classes of DNA sequence repeats

scientific article (publication date: 2006)

LGR5 is a marker of poor prognosis in glioblastoma and is required for survival of brain cancer stem-like cells

scientific article published on 30 August 2012

Loss of FUBP1 expression in gliomas predicts FUBP1 mutation and is associated with oligodendroglial differentiation, IDH1 mutation and 1p/19q loss of heterozygosity.

scientific article

MOLECULAR GENETIC DETERMINANTS OF LONG-TERM SURVIVAL WITH GLIOBLASTOMA.

scientific article published in July 2014

MYC high level gene amplification is a distinctive feature of angiosarcomas after irradiation or chronic lymphedema

scientific article

Mapping candidate regions and genes for congenital anomalies of the kidneys and urinary tract (CAKUT) by array-based comparative genomic hybridization

scientific article published on 5 July 2010

Matrix-comparative genomic hybridization from multicenter formalin-fixed paraffin-embedded colorectal cancer tissue blocks

scientific article

Methylome analysis and integrative profiling of human HCCs identify novel protumorigenic factors

scientific article

Microglia isolated from patients with glioma gain antitumor activities on poly (I:C) stimulation

scientific article published on 20 October 2011

Molecular characterization of long-term survivors of glioblastoma using genome- and transcriptome-wide profiling.

scientific article

Molecular classification of diffuse cerebral WHO grade II/III gliomas using genome- and transcriptome-wide profiling improves stratification of prognostically distinct patient groups

scientific article published on 18 March 2015

Molecular classification of human gliomas using matrix-based comparative genomic hybridization

scientific article published in October 2005

Molecular evolution of color vision of zebra finch

scientific article published in December 2000

Molecular genetics and the evolution of ultraviolet vision in vertebrates.

scientific article

Molecular signatures classify astrocytic gliomas by IDH1 mutation status.

scientific article published in March 2011

Mutagenesis and reconstitution of middle-to-long-wave-sensitive visual pigments of New World monkeys for testing the tuning effect of residues at sites 229 and 233.

scientific article

Outcome prediction in pediatric medulloblastoma based on DNA copy-number aberrations of chromosomes 6q and 17q and the MYC and MYCN loci

scientific article (publication date: April 2009)

P08.25 de novo transcriptome assembly finds novel glioblastoma subtype-specific transcripts.

scientific article

P42: High resolution genomic profiling reveals association of chromosomal aberrations on 1q and 16p with histological and genetic subgroups of invasive breast cancer

P45: Comprehensive genomic analysis of desmoplastic medulloblastomas reveals novel amplified genes and supports a monoclonal origin of the different histologic components

article

PII Protein-Derived FRET Sensors for Quantification and Live-Cell Imaging of 2-Oxoglutarate.

scientific article

Primary glioblastoma cultures: can profiling of stem cell markers predict radiotherapy sensitivity?

scientific article published on 18 July 2014

RNAi screening in glioma stem-like cells identifies PFKFB4 as a key molecule important for cancer cell survival.

scientific article published on 7 November 2011

Recurrent FGFR1 amplification and high FGFR1 protein expression in oral squamous cell carcinoma (OSCC).

scientific article published on 27 June 2006

Recurrent coamplification of cytoskeleton-associated genesEMS1 andSHANK2 withCCND1 in oral squamous cell carcinoma

article

Recurrent copy number gain of transcription factor SOX2 and corresponding high protein expression in oral squamous cell carcinoma

scientific article published in January 2010

Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing

scientific article

Reduced H3K27me3 and DNA hypomethylation are major drivers of gene expression in K27M mutant pediatric high-grade gliomas

scientific article

Regeneration of ultraviolet pigments of vertebrates

scientific article published in February 1998

Role of FGFR4 signaling in human hepatocellular carcinoma

Rosetted glioneuronal tumor of the spine with overtly anaplastic histological features

scientific article published on 6 March 2009

Sensitivity and resistance towards isoliquiritigenin, doxorubicin and methotrexate in T cell acute lymphoblastic leukaemia cell lines by pharmacogenomics

scientific article published on 29 July 2010

Severe mental retardation with breathing abnormalities (Pitt-Hopkins syndrome) is caused by haploinsufficiency of the neuronal bHLH transcription factor TCF4.

scientific article

Stem cell marker CD133 affects clinical outcome in glioma patients

scientific article published in January 2008

Supratentorial primitive neuroectodermal tumors of the central nervous system frequently harbor deletions of the CDKN2A locus and other genomic aberrations distinct from medulloblastomas

scientific article

Tagmentation-based whole-genome bisulfite sequencing

scientific article

Targeting self-renewal in high-grade brain tumors leads to loss of brain tumor stem cells and prolonged survival

scientific article published on 15 May 2014

The "five-sites" rule and the evolution of red and green color vision in mammals

scientific article published in May 1998

The Authors' reply

The Wnt secretion protein Evi/Gpr177 promotes glioma tumourigenesis

scientific article

The branched-chain amino acid transaminase 1 sustains growth of antiestrogen-resistant and ERα-negative breast cancer

scientific article published on 20 March 2017

The endogenous tryptophan metabolite and NAD+ precursor quinolinic acid confers resistance of gliomas to oxidative stress

scientific article published on 2 April 2013

The nuclear receptor tailless induces long-term neural stem cell expansion and brain tumor initiation

scientific article

The onset of p53 loss of heterozygosity is differentially induced in various stem cell types and may involve the loss of either allele

scientific article

Towards mapping phenotypical traits in 18p- syndrome by array-based comparative genomic hybridisation and fluorescent in situ hybridisation

scientific article published on 4 October 2006

Ultraviolet pigments in birds evolved from violet pigments by a single amino acid change.

scientific article

[A new dimension of DNA analysis: genomic profiling by matrix CGH]

scientific article published on 01 January 2003

List of works by Bernhard Radlwimmer

A chromosome 8 gene-cluster polymorphism with low human beta-defensin 2 gene copy number predisposes to Crohn disease of the colon

A gene signature distinguishing CD133hi from CD133- colorectal cancer cells: essential role for EGR1 and downstream factors

Adaptive evolution of color vision of the Comoran coelacanth (Latimeria chalumnae)

An endogenous tumour-promoting ligand of the human aryl hydrocarbon receptor

Angiocentric glioma: report of clinico-pathologic and genetic findings in 8 cases

Apoptosis-based treatment of glioblastomas with ABT-737, a novel small molecule inhibitor of Bcl-2 family proteins

Array-CGH in unclear syndromic nephropathies identifies a microdeletion in Xq22.3-q23.

Array-based profiling of reference-independent methylation status (aPRIMES) identifies frequent promoter methylation and consecutive downregulation of ZIC2 in pediatric medulloblastoma

Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes

Author Correction: BCAT1 restricts αKG levels in AML stem cells leading to IDH-like DNA hypermethylation

Author Correction: BCAT1 restricts αKG levels in AML stem cells leading to IDHmut-like DNA hypermethylation

Automated array-based genomic profiling in chronic lymphocytic leukemia: development of a clinical tool and discovery of recurrent genomic alterations

BCAT1 promotes cell proliferation through amino acid catabolism in gliomas carrying wild-type IDH1.

BCAT1 restricts αKG levels in AML stem cells leading to IDHmut-like DNA hypermethylation

BRAF gene duplication constitutes a mechanism of MAPK pathway activation in low-grade astrocytomas

Branched-chain ketoacids secreted by glioblastoma cells via MCT1 modulate macrophage phenotype

Candidate genes in breast cancer revealed by microarray-based comparative genomic hybridization of archived tissue.

Cloning and expression of the red visual pigment gene of goat (Capra hircus).

Co-localization of CENP-C and CENP-H to discontinuous domains of CENP-A chromatin at human neocentromeres

Comprehensive characterization of genomic aberrations in gangliogliomas by CGH, array-based CGH and interphase FISH.

Comprehensive genomic analysis of desmoplastic medulloblastomas: identification of novel amplified genes and separate evaluation of the different histological components

Copy number alterations in childhood acute lymphoblastic leukemia and their association with minimal residual disease

DNA dot-blot hybridization implicates human papillomavirus type 11-DNA in epithelioma cuniculatum

DNA methylation-based classification of central nervous system tumours

DNA methylome analysis in Burkitt and follicular lymphomas identifies differentially methylated regions linked to somatic mutation and transcriptional control

DNA microarray analysis identifies candidate regions and genes in unexplained mental retardation

De-repression of CTGF via the miR-17-92 cluster upon differentiation of human glioblastoma spheroid cultures

Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing

Decreased expression of the mitochondrial BCAT protein correlates with improved patient survival in IDH-WT gliomas.

Detection of chromosomal imbalances in retinoblastoma by matrix-based comparative genomic hybridization

Differential retinoic acid signaling in tumors of long- and short-term glioblastoma survivors

Differentiation therapy exerts antitumor effects on stem-like glioma cells

Disclosure of Candidate Genes in Acute Myeloid Leukemia With Complex Karyotypes Using Microarray-Based Molecular Characterization

EEF1A2 inactivates p53 by way of PI3K/AKT/mTOR-dependent stabilization of MDM4 in hepatocellular carcinoma

Epigenetic upregulation of lncRNAs at 13q14.3 in leukemia is linked to the In Cis downregulation of a gene cluster that targets NF-kB.

Establishment, characterization and drug sensitivity testing in primary cultures of human thymoma and thymic carcinoma.

Etiology-dependent molecular mechanisms in human hepatocarcinogenesis

Expansive growth of two glioblastoma stem-like cell lines is mediated by bFGF and not by EGF.

Expression of an ASCL2 related stem cell signature and IGF2 in colorectal cancer liver metastases with 11p15.5 gain.

Expression of podoplanin in human astrocytic brain tumors is controlled by the PI3K-AKT-AP-1 signaling pathway and promoter methylation

FARP2, HDLBP and PASK are downregulated in a patient with autism and 2q37.3 deletion syndrome

Frequent amplifications and abundant expression of TRIO, NKD2, and IRX2 in soft tissue sarcomas

Frequent loss of chromosome 9, homozygous CDKN2A/p14(ARF)/CDKN2B deletion and low TSC1 mRNA expression in pleomorphic xanthoastrocytomas

GE-07DNA METHYLATION IN MEDULLOBLASTOMA AND MOLECULAR DIAGNOSTICS OF BRAIN TUMORS.

Genetic analyses of the green visual pigments of rabbit (Oryctolagus cuniculus) and rat (Rattus norvegicus).

Genome-wide analysis for micro-aberrations in familial exstrophy of the bladder using array-based comparative genomic hybridization

Genomic DNA-chip hybridization in t(11;14)-positive mantle cell lymphomas shows a high frequency of aberrations and allows a refined characterization of consensus regions

Genomic DNA-chip hybridization reveals a higher incidence of genomic amplifications in pancreatic cancer than conventional comparative genomic hybridization and leads to the identification of novel candidate genes

Genomic and expression profiling of glioblastoma stem cell-like spheroid cultures identifies novel tumor-relevant genes associated with survival

Genomic and protein expression profiling identifies CDK6 as novel independent prognostic marker in medulloblastoma

Genomic and spectral analyses of long to middle wavelength-sensitive visual pigments of common marmoset (Callithrix jacchus).

Genomic profiling reveals distinctive molecular relapse patterns in IDH1/2 wild-type glioblastoma.

Gilvocarcin V exhibits both equilibrium DNA binding and UV light induced DNA adduct formation which is sequence context dependent

Glioblastoma epigenome profiling identifies SOX10 as a master regulator of molecular tumour subtype

High-resolution genomic profiling of childhood T-ALL reveals frequent copy-number alterations affecting the TGF-beta and PI3K-AKT pathways and deletions at 6q15-16.1 as a genomic marker for unfavorable early treatment response

High-resolution genomic profiling reveals association of chromosomal aberrations on 1q and 16p with histologic and genetic subgroups of invasive breast cancer

Hochauflösende genomische Analyse des HCC

Hotspot mutations in H3F3A and IDH1 define distinct epigenetic and biological subgroups of glioblastoma

Identification of gains on 1q and epidermal growth factor receptor overexpression as independent prognostic markers in intracranial ependymoma

Integrated DNA methylation and copy-number profiling identify three clinically and biologically relevant groups of anaplastic glioma

International network of cancer genome projects

Isochromosome breakpoints on 17p in medulloblastoma are flanked by different classes of DNA sequence repeats

LGR5 is a marker of poor prognosis in glioblastoma and is required for survival of brain cancer stem-like cells

Loss of FUBP1 expression in gliomas predicts FUBP1 mutation and is associated with oligodendroglial differentiation, IDH1 mutation and 1p/19q loss of heterozygosity.

MOLECULAR GENETIC DETERMINANTS OF LONG-TERM SURVIVAL WITH GLIOBLASTOMA.

MYC high level gene amplification is a distinctive feature of angiosarcomas after irradiation or chronic lymphedema

Mapping candidate regions and genes for congenital anomalies of the kidneys and urinary tract (CAKUT) by array-based comparative genomic hybridization

Matrix-comparative genomic hybridization from multicenter formalin-fixed paraffin-embedded colorectal cancer tissue blocks

Methylome analysis and integrative profiling of human HCCs identify novel protumorigenic factors

Microglia isolated from patients with glioma gain antitumor activities on poly (I:C) stimulation

Molecular characterization of long-term survivors of glioblastoma using genome- and transcriptome-wide profiling.

Molecular classification of diffuse cerebral WHO grade II/III gliomas using genome- and transcriptome-wide profiling improves stratification of prognostically distinct patient groups

Molecular classification of human gliomas using matrix-based comparative genomic hybridization

Molecular evolution of color vision of zebra finch

Molecular genetics and the evolution of ultraviolet vision in vertebrates.

Molecular signatures classify astrocytic gliomas by IDH1 mutation status.

Mutagenesis and reconstitution of middle-to-long-wave-sensitive visual pigments of New World monkeys for testing the tuning effect of residues at sites 229 and 233.

Outcome prediction in pediatric medulloblastoma based on DNA copy-number aberrations of chromosomes 6q and 17q and the MYC and MYCN loci

P08.25 de novo transcriptome assembly finds novel glioblastoma subtype-specific transcripts.