List of works - Mads Albertsen

"Candidatus Accumulibacter delftensis": A clade IC novel polyphosphate-accumulating organism without denitrifying activity on nitrate

scientific article published on 02 June 2019

"Candidatus Propionivibrio aalborgensis": A Novel Glycogen Accumulating Organism Abundant in Full-Scale Enhanced Biological Phosphorus Removal Plants

scientific article published on 04 July 2016

'Candidatus Competibacter'-lineage genomes retrieved from metagenomes reveal functional metabolic diversity.

scientific article published on 31 October 2013

A B-cell-associated gene signature classification of diffuse large B-cell lymphoma by NanoString technology

scientific article published on 01 July 2018

A Critical Assessment of the Microorganisms Proposed to be Important to Enhanced Biological Phosphorus Removal in Full-Scale Wastewater Treatment Systems

scientific article

A metagenome of a full-scale microbial community carrying out enhanced biological phosphorus removal.

scientific article

Back to Basics--The Influence of DNA Extraction and Primer Choice on Phylogenetic Analysis of Activated Sludge Communities.

scientific article published on 16 July 2015

Characterization of a thaumarchaeal symbiont that drives incomplete nitrification in the tropical sponge Ianthella basta

scientific article published on 25 July 2019

Characterization of the First " Nitrotoga" Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria

scientific article published on 10 July 2018

Characterization of the In Situ Ecophysiology of Novel Phylotypes in Nutrient Removal Activated Sludge Treatment Plants

scientific article published on 4 September 2015

Clinical results and microbiota changes after faecal microbiota transplantation for chronic pouchitis: a pilot study

scientific article published on 14 April 2020

Comparative Genome-Centric Analysis of Freshwater and Marine ANAMMOX Cultures Suggests Functional Redundancy in Nitrogen Removal Processes

scientific article published on 07 July 2020

Complete Genome Sequence of the Bacterium Aalborg_AAW-1, Representing a Novel Family within the Candidate Phylum SR1.

scientific article published on 11 June 2015

Complete Genome Sequences of Pseudomonas monteilii SB3078 and SB3101, Two Benzene-, Toluene-, and Ethylbenzene-Degrading Bacteria Used for Bioaugmentation

scientific article published on 29 May 2014

Complete Genome of Rhodococcus pyridinivorans SB3094, a Methyl-Ethyl-Ketone-Degrading Bacterium Used for Bioaugmentation

scientific article

Complete nitrification by Nitrospira bacteria

scientific article

Complete nitrification by a single microorganism

scientific article

Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing

scientific article published on 31 March 2021

Crenothrix are major methane consumers in stratified lakes

scientific article published on 6 June 2017

Cultivation and Genomic Analysis of “Candidatus Nitrosocaldus islandicus,” an Obligately Thermophilic, Ammonia-Oxidizing Thaumarchaeon from a Hot Spring Biofilm in Graendalur Valley, Iceland.

scientific article published on 14 February 2018

Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system

scientific article

Culture-Independent Analyses Reveal Novel Anaerolineaceae as Abundant Primary Fermenters in Anaerobic Digesters Treating Waste Activated Sludge

scientific article

Curli Functional Amyloid Systems Are Phylogenetically Widespread and Display Large Diversity in Operon and Protein Structure ⬇️

scientific article published on December 12, 2012

Digging into the extracellular matrix of a complex microbial community using a combined metagenomic and metaproteomic approach.

scientific article

Draft Genome Sequence of Desulfuromonas acetexigens Strain 2873, a Novel Anode-Respiring Bacterium.

scientific article published on 2 March 2017

Drinking Water Microbiome Project: Is it Time?

scientific article published on 25 April 2019

Dynamics of the Fouling Layer Microbial Community in a Membrane Bioreactor.

scientific article

Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genus Nitrospira

scientific article

Exploring the upper pH limits of nitrite oxidation: diversity, ecophysiology, and adaptive traits of haloalkalitolerant Nitrospira

scientific article published on 24 July 2020

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

scientific article

Genomic and in situ investigations of the novel uncultured Chloroflexi associated with 0092 morphotype filamentous bulking in activated sludge

scientific article published on 23 February 2016

Genomic insights into Candidatus Amarolinea aalborgensis gen. nov., sp. nov., associated with settleability problems in wastewater treatment plants

scientific article published on 16 August 2018

Genomic insights into members of the candidate phylum Hyd24-12 common in mesophilic anaerobic digesters

scientific article

Genomic insights into the Agromyces-like symbiont of earthworms and its distribution among host species.

scientific article published on 12 April 2018

Growth of nitrite-oxidizing bacteria by aerobic hydrogen oxidation

scientific article published in August 2014

Identification of syntrophic acetate-oxidizing bacteria in anaerobic digesters by combined protein-based stable isotope probing and metagenomics

scientific article published on 29 April 2016

In situ metabolomic- and transcriptomic-profiling of the host-associated cyanobacteria Prochloron and Acaryochloris marina

scientific article published on 31 October 2017

Increased transmissibility of SARS-CoV-2 lineage B.1.1.7 by age and viral load

Investigation of Detection Limits and the Influence of DNA Extraction and Primer Choice on the Observed Microbial Communities in Drinking Water Samples Using 16S rRNA Gene Amplicon Sequencing

article

Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle.

scientific article

Limited dissemination of the wastewater treatment plant core resistome.

scientific article

Metabolic model for the filamentous 'Candidatus Microthrix parvicella' based on genomic and metagenomic analyses

scientific article published on 28 February 2013

Metagenomes obtained by 'deep sequencing' - what do they tell about the enhanced biological phosphorus removal communities?

scientific article

MiDAS 2.0: an ecosystem-specific taxonomy and online database for the organisms of wastewater treatment systems expanded for anaerobic digester groups.

scientific article

MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants

scientific article published on 07 April 2022

MiDAS: the field guide to the microbes of activated sludge.

scientific article published on 27 June 2015

Novel prosthecate bacteria from the candidate phylum Acetothermia

scientific article published on 08 June 2018

Novel syntrophic bacteria in full-scale anaerobic digesters revealed by genome-centric metatranscriptomics

scientific article published on 02 January 2020

Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing

scientific article published in 2022

Peatland Acidobacteria with a dissimilatory sulfur metabolism

scientific article published on 23 February 2018

Peatland Acidobacteria with a dissimilatory sulfur metabolism

article published in 2017

Phylogenetic diversity and ecophysiology of Candidate phylum Saccharibacteria in activated sludge.

scientific article published on 17 April 2016

Re-evaluating the microbiology of the enhanced biological phosphorus removal process

scientific article published on 05 April 2019

Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias.

scientific article published in January 2018

The Microbial Database for Danish wastewater treatment plants with nutrient removal (MiDas-DK) - a tool for understanding activated sludge population dynamics and community stability.

scientific article published in January 2013

The activated sludge ecosystem contains a core community of abundant organisms

scientific article

The impact of immigration on microbial community composition in full-scale anaerobic digesters

scientific article published on 24 August 2017

Unlinked rRNA genes are widespread among bacteria and archaea

scientific article published on 11 November 2019

List of works by Mads Albertsen

"Candidatus Accumulibacter delftensis": A clade IC novel polyphosphate-accumulating organism without denitrifying activity on nitrate

"Candidatus Propionivibrio aalborgensis": A Novel Glycogen Accumulating Organism Abundant in Full-Scale Enhanced Biological Phosphorus Removal Plants

'Candidatus Competibacter'-lineage genomes retrieved from metagenomes reveal functional metabolic diversity.

A B-cell-associated gene signature classification of diffuse large B-cell lymphoma by NanoString technology

A Critical Assessment of the Microorganisms Proposed to be Important to Enhanced Biological Phosphorus Removal in Full-Scale Wastewater Treatment Systems

A metagenome of a full-scale microbial community carrying out enhanced biological phosphorus removal.

Back to Basics--The Influence of DNA Extraction and Primer Choice on Phylogenetic Analysis of Activated Sludge Communities.

Characterization of a thaumarchaeal symbiont that drives incomplete nitrification in the tropical sponge Ianthella basta

Characterization of the First " Nitrotoga" Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria

Characterization of the In Situ Ecophysiology of Novel Phylotypes in Nutrient Removal Activated Sludge Treatment Plants

Clinical results and microbiota changes after faecal microbiota transplantation for chronic pouchitis: a pilot study

Comparative Genome-Centric Analysis of Freshwater and Marine ANAMMOX Cultures Suggests Functional Redundancy in Nitrogen Removal Processes

Complete Genome Sequence of the Bacterium Aalborg_AAW-1, Representing a Novel Family within the Candidate Phylum SR1.

Complete Genome Sequences of Pseudomonas monteilii SB3078 and SB3101, Two Benzene-, Toluene-, and Ethylbenzene-Degrading Bacteria Used for Bioaugmentation

Complete Genome of Rhodococcus pyridinivorans SB3094, a Methyl-Ethyl-Ketone-Degrading Bacterium Used for Bioaugmentation

Complete nitrification by Nitrospira bacteria

Complete nitrification by a single microorganism

Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing

Crenothrix are major methane consumers in stratified lakes

Cultivation and Genomic Analysis of “Candidatus Nitrosocaldus islandicus,” an Obligately Thermophilic, Ammonia-Oxidizing Thaumarchaeon from a Hot Spring Biofilm in Graendalur Valley, Iceland.

Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system

Culture-Independent Analyses Reveal Novel Anaerolineaceae as Abundant Primary Fermenters in Anaerobic Digesters Treating Waste Activated Sludge

Curli Functional Amyloid Systems Are Phylogenetically Widespread and Display Large Diversity in Operon and Protein Structure ⬇️

Digging into the extracellular matrix of a complex microbial community using a combined metagenomic and metaproteomic approach.

Draft Genome Sequence of Desulfuromonas acetexigens Strain 2873, a Novel Anode-Respiring Bacterium.

Drinking Water Microbiome Project: Is it Time?

Dynamics of the Fouling Layer Microbial Community in a Membrane Bioreactor.

Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genus Nitrospira

Exploring the upper pH limits of nitrite oxidation: diversity, ecophysiology, and adaptive traits of haloalkalitolerant Nitrospira

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

Genomic and in situ investigations of the novel uncultured Chloroflexi associated with 0092 morphotype filamentous bulking in activated sludge

Genomic insights into Candidatus Amarolinea aalborgensis gen. nov., sp. nov., associated with settleability problems in wastewater treatment plants

Genomic insights into members of the candidate phylum Hyd24-12 common in mesophilic anaerobic digesters

Genomic insights into the Agromyces-like symbiont of earthworms and its distribution among host species.

Growth of nitrite-oxidizing bacteria by aerobic hydrogen oxidation

Identification of syntrophic acetate-oxidizing bacteria in anaerobic digesters by combined protein-based stable isotope probing and metagenomics

In situ metabolomic- and transcriptomic-profiling of the host-associated cyanobacteria Prochloron and Acaryochloris marina

Increased transmissibility of SARS-CoV-2 lineage B.1.1.7 by age and viral load

Investigation of Detection Limits and the Influence of DNA Extraction and Primer Choice on the Observed Microbial Communities in Drinking Water Samples Using 16S rRNA Gene Amplicon Sequencing

Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle.

Limited dissemination of the wastewater treatment plant core resistome.

Metabolic model for the filamentous 'Candidatus Microthrix parvicella' based on genomic and metagenomic analyses

Metagenomes obtained by 'deep sequencing' - what do they tell about the enhanced biological phosphorus removal communities?

MiDAS 2.0: an ecosystem-specific taxonomy and online database for the organisms of wastewater treatment systems expanded for anaerobic digester groups.

MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants

MiDAS: the field guide to the microbes of activated sludge.

Novel prosthecate bacteria from the candidate phylum Acetothermia

Novel syntrophic bacteria in full-scale anaerobic digesters revealed by genome-centric metatranscriptomics

Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing

Peatland Acidobacteria with a dissimilatory sulfur metabolism

Peatland Acidobacteria with a dissimilatory sulfur metabolism

Phylogenetic diversity and ecophysiology of Candidate phylum Saccharibacteria in activated sludge.

Re-evaluating the microbiology of the enhanced biological phosphorus removal process

Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias.

The Microbial Database for Danish wastewater treatment plants with nutrient removal (MiDas-DK) - a tool for understanding activated sludge population dynamics and community stability.

The activated sludge ecosystem contains a core community of abundant organisms

The impact of immigration on microbial community composition in full-scale anaerobic digesters

Unlinked rRNA genes are widespread among bacteria and archaea