List of works - Florent Lassalle

Ancestral genome estimation reveals the history of ecological diversification in Agrobacterium.

scientific article

Co-evolution of sites under immune selection shapes Epstein-Barr Virus population structure

scientific article published on 02 July 2019

Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales

scientific article published on 06 April 2020

Ecological speciation in bacteria: reverse ecology approaches reveal the adaptive part of bacterial cladogenesis.

scientific article published on 17 July 2015

GC-Content evolution in bacterial genomes: the biased gene conversion hypothesis expands

scientific article published on 6 February 2015

Genomic species are ecological species as revealed by comparative genomics in Agrobacterium tumefaciens.

scientific article

Improving the estimation of genetic distances from Next-Generation Sequencing data

article by Filipe G. Vieira et al published 30 March 2015 in Biological Journal of the Linnean Society

Inferring horizontal gene transfer

scientific article published in May 2015

Islands of linkage in an ocean of pervasive recombination reveals two-speed evolution of human cytomegalovirus genomes

scientific article published on 01 January 2016

Minimal standards for the description of new genera and species of rhizobia and agrobacteria

scientific article published in July 2019

Oral microbiomes from hunter-gatherers and traditional farmers reveal shifts in commensal balance and pathogen load linked to diet

scientific article

Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the presence of a linear chromid.

scientific article published on 17 January 2014

TPMS: a set of utilities for querying collections of gene trees

scientific article

Taxonomy of Rhizobiaceae revisited: proposal of a new framework for genus delimitation

scientific article published on 3 March 2022

Two Novel Genomospecies in the Agrobacterium tumefaciens Species Complex Associated with Rose Crown Gall

scientific article published on 02 October 2019

Whole genome sequencing of Herpes Simplex Virus 1 directly from human cerebrospinal fluid reveals selective constraints in neurotropic viruses

scientific article published on 01 January 2020

List of works by Florent Lassalle

Ancestral genome estimation reveals the history of ecological diversification in Agrobacterium.

Co-evolution of sites under immune selection shapes Epstein-Barr Virus population structure

Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales

Ecological speciation in bacteria: reverse ecology approaches reveal the adaptive part of bacterial cladogenesis.

GC-Content evolution in bacterial genomes: the biased gene conversion hypothesis expands

Genomic species are ecological species as revealed by comparative genomics in Agrobacterium tumefaciens.

Improving the estimation of genetic distances from Next-Generation Sequencing data

Inferring horizontal gene transfer

Islands of linkage in an ocean of pervasive recombination reveals two-speed evolution of human cytomegalovirus genomes

Minimal standards for the description of new genera and species of rhizobia and agrobacteria

Oral microbiomes from hunter-gatherers and traditional farmers reveal shifts in commensal balance and pathogen load linked to diet

Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the presence of a linear chromid.

TPMS: a set of utilities for querying collections of gene trees

Taxonomy of Rhizobiaceae revisited: proposal of a new framework for genus delimitation

Two Novel Genomospecies in the Agrobacterium tumefaciens Species Complex Associated with Rose Crown Gall

Whole genome sequencing of Herpes Simplex Virus 1 directly from human cerebrospinal fluid reveals selective constraints in neurotropic viruses