List of works by Warren E. Johnson

A comprehensive whole-genome integrated cytogenetic map for the alpaca (Lama pacos).

scientific article published on January 2014

A molecular phylogeny of living primates

scientific article published in March 2011

A revised taxonomy of the Felidae ⬇️

scientific article

AGA President's Symposium 2011: the application of genomics to biodiversity

scientific article published in November 2011

Adaptive evolution of the matrix extracellular phosphoglycoprotein in mammals

scientific article

Adaptive genomic evolution of opsins reveals that early mammals flourished in nocturnal environments

scientific article published on 5 February 2018

Applying molecular genetic tools to tiger conservation.

scientific article

Aqueous-phase disappearance of atrazine, metolachlor, and chlorpyrifos in laboratory aquaria and outdoor macrocosms

scientific article published in January 2003

Author Correction: Puma genomes from North and South America provide insights into the genomic consequences of inbreeding

scientific article published on 21 November 2019

Big cat genomics.

scientific article

Biogeographic variation of food habits and body size of the America puma

scientific article

Bone-associated gene evolution and the origin of flight in birds

scientific article

Camelid genetics and reproductive biotechnologies.

scientific article published in November 2014

Chromosome-length genome assembly and karyotype of the endangered black-footed ferret (<i>Mustela nigripes</i>)

scientific article published on 30 May 2023

Cloning, characterization, and expression analysis of the novel acetyltransferase retrogene Ard1b in the mouse

scientific article (publication date: August 2009)

Comparative genomics reveals insights into avian genome evolution and adaptation

scientific article

Conservation Genetics of the Cheetah: Lessons Learned and New Opportunities.

scientific article

Cross-amplification and characterization of 13 tetranucleotide microsatellites in multiple species of Neotropical canids.

scientific article published in July 2008

Cross-species transmission of retroviruses among domestic and wild felids in human-occupied landscapes in Chile

scientific article published on 27 January 2021

Darwin's Fox: A Distinct Endangered Species in a Vanishing Habitat

article

Detecting the vanishing populations of the highly endangered Darwin's fox, Pseudalopex fulvipes

Development of Y chromosome intraspecific polymorphic markers in the Felidae

scientific article

Development of microsatellite markers in the guanaco, Lama guanicoe: utility for South American camelids

scientific article published in November 2000

Does genetic introgression improve female reproductive performance? A test on the endangered Florida panther

scientific article

Earth BioGenome Project: Sequencing life for the future of life.

scientific article published on 23 April 2018

Ecological and biogeographical inferences on two sympatric and enigmatic Andean cat species using genetic identification of faecal samples.

scientific article

Eighteen polymorphic microsatellite markers for the highly endangered Spanish imperial eagle (Aquila adalberti) and related species

article

Emerging viruses in the Felidae: shifting paradigms

scientific article

Evolution of CRISPs Associated with Toxicoferan-Reptilian Venom and Mammalian Reproduction

scientific article published on 01 February 2012

Evolution of the male-determining gene SRY within the cat family Felidae.

scientific article published on 4 February 2007

Evolutionary analysis of a large mtDNA translocation (numt) into the nuclear genome of the Panthera genus species

scientific article (publication date: February 2006)

Evolutionary genomics and adaptive evolution of the Hedgehog gene family (Shh, Ihh and Dhh) in vertebrates

scientific article

Exposure to disease agents in the endangered Iberian lynx (Lynx pardinus)

scientific article published on 24 July 2007

Expression profiling of purified male germ cells: stage-specific expression patterns related to meiosis and postmeiotic development.

scientific article published on 15 November 2005

FIV cross-species transmission: an evolutionary prospective

scientific article

Fish lateral line innovation: insights into the evolutionary genomic dynamics of a unique mechanosensory organ

scientific article

Gene loss, adaptive evolution and the co-evolution of plumage coloration genes with opsins in birds

scientific article

Genetic Introgression and the Survival of Florida Panther Kittens

scientific article

Genetic characterization of feline leukemia virus from Florida panthers.

scientific article published on February 2008

Genetic diversity of Rhizobium from nodulating beans grown in a variety of Mediterranean climate soils of Chile.

scientific article published on 23 December 2014

Genetic restoration of the Florida panther.

scientific article

Genome-wide Evidence Reveals that African and Eurasian Golden Jackals Are Distinct Species

scientific article

Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens

scientific article published on 09 October 2020

Genomic legacy of the African cheetah, Acinonyx jubatus

scientific article

How the leopard hides its spots: ASIP mutations and melanism in wild cats

scientific article

Identification of differentially expressed genes in mouse spermatogenesis

scientific journal article

Incomplete lineage sorting and phenotypic evolution in marsupials

scientific article published in 2022

Initial sequence and comparative analysis of the cat genome

scientific article

Intentional genetic introgression influences survival of adults and subadults in a small, inbred felid population.

scientific article

Inter-species hybridization among Neotropical cats of the genus Leopardus, and evidence for an introgressive hybrid zone between L. geoffroyi and L. tigrinus in southern Brazil.

scientific article published in October 2008

Isolation and characterization of microsatellite markers in pangolins (Mammalia, Pholidota,Manisspp.)

scientific article published in 2006

Landscape genomics: natural selection drives the evolution of mitogenome in penguins.

scientific article

Life on the edge: the long-term persistence and contrasting spatial genetic structure of distinct brown trout life histories at their ecological limits

scientific article published on 17 February 2006

Maintenance of genetic diversity in an introduced island population of guanacos after seven decades and two severe demographic bottlenecks: implications for camelid conservation.

scientific article

Mammalian keratin associated proteins (KRTAPs) subgenomes: disentangling hair diversity and adaptation to terrestrial and aquatic environments

scientific article

Mitochondrial introgressions into the nuclear genome of the domestic cat.

scientific article published on 28 July 2007

Molecular assessment of the phylogeny and biogeography of a recently diversified endemic group of South American canids (Mammalia: Carnivora: Canidae)

scientific article

Molecular evidence for a recent demographic expansion in the puma (Puma concolor) (Mammalia, Felidae)

scientific article (publication date: December 2013)

Molecular evidence for species-level distinctions in clouded leopards

scientific article

Molecular evolution and the role of oxidative stress in the expansion and functional diversification of cytosolic glutathione transferases

scientific article

Molecular genetic insights on cheetah (Acinonyx jubatus) ecology and conservation in Namibia

scientific article

Molecular genetics and evolution of melanism in the cat family

scientific article

Olfactory Receptor Subgenomes Linked with Broad Ecological Adaptations in Sauropsida

scientific article published on 28 July 2015

PGD: a pangolin genome hub for the research community

scientific article published on 11 September 2016

Pangolin genomes and the evolution of mammalian scales and immunity

scientific article published on 10 August 2016

Pattern and timing of diversification of the mammalian order Carnivora inferred from multiple nuclear gene sequences

scientific article

Patterns of molecular genetic variation among cat breeds.

scientific article published on 25 October 2007

Phylogenetic and phylogeographic analysis of Iberian lynx populations.

scientific article published in January 2004

Phylogenetic reconstruction of South American felids defined by protein electrophoresis.

scientific article

Phylogenetics, genome diversity and origin of modern leopard, Panthera pardus

scientific article (publication date: November 2001)

Phylogeographic patterns and evolution of the mitochondrial DNA control region in two neotropical cats (Mammalia, felidae).

scientific article

Phylogeography and genetic ancestry of tigers (Panthera tigris)

scientific article published in December 2004

Pleistocene and ecological effects on continental-scale genetic differentiation in the bobcat (Lynx rufus).

scientific article published on 30 April 2012

Positive Selection Linked with Generation of Novel Mammalian Dentition Patterns.

scientific article published on 09 September 2016

Puma genomes from North and South America provide insights into the genomic consequences of inbreeding

scientific article published on 18 October 2019

Rates of nuclear and cytoplasmic mitochondrial DNA sequence divergence in mammals.

scientific article

Reduced Genetic Diversity and Increased Dispersal in Guigna (Leopardus guigna) in Chilean Fragmented Landscapes.

scientific article

Resolution of recent radiations within three evolutionary lineages of felidae using mitochondrial restriction fragment length polymorphism variation

Response to Comment by Faurby, Werdelin and Svenning

scientific article

Seroprevalence and genomic divergence of circulating strains of feline immunodeficiency virus among Felidae and Hyaenidae species

scientific article

State of cat genomics

scientific article

Structure and patterns of sequence variation in the mitochondrial DNA control region of the great cats

scientific article published on 01 October 2001

Subspecies genetic assignments of worldwide captive tigers increase conservation value of captive populations

scientific article

Sympatric Asian felid phylogeography reveals a major Indochinese-Sundaic divergence

scientific article

The Earth BioGenome Project 2020: Starting the clock

scientific article published on 25 January 2022

The Near Eastern origin of cat domestication

scientific article

The adaptive evolution of the mammalian mitochondrial genome

scientific article (publication date: 4 March 2008)

The complete phylogeny of pangolins: scaling up resources for the molecular tracing of the most trafficked mammals on Earth.

scientific article

The evolutionary dynamics of the lion Panthera leo revealed by host and viral population genomics

scientific article

The evolutionary history of extinct and living lions

scientific article published on 04 May 2020

The genetic inheritance of the blue-eyed white phenotype in alpacas (Vicugna pacos).

scientific article

The influence of the arid Andean high plateau on the phylogeography and population genetics of guanaco (Lama guanicoe) in South America

scientific article (publication date: 2013)

The late Miocene radiation of modern Felidae: a genetic assessment

scientific article

The role of gene duplication and unconstrained selective pressures in the melanopsin gene family evolution and vertebrate circadian rhythm regulation

scientific article (publication date: 2012)

The role of genomics in conservation and reproductive sciences

scientific article

The tiger genome and comparative analysis with lion and snow leopard genomes

scientific article

Tissue sampling methods and standards for vertebrate genomics

scientific article (publication date: 12 July 2012)

Tracking the evolution of the elusive Andean mountain cat (Oreailurus jacobita) from mitochondrial DNA

scientific article

Whole Genome Sequencing and Re-sequencing of the Sable Antelope (Hippotragus niger): A Resource for Monitoring Diversity in ex Situ and in Situ Populations

scientific article published on 05 June 2019

Whole-Genome Identification, Phylogeny, and Evolution of the Cytochrome P450 Family 2 (CYP2) Subfamilies in Birds

scientific article

Whole-genome analyses resolve early branches in the tree of life of modern birds

scientific article

Y-chromosome and mtDNA variation confirms independent domestications and directional hybridization in South American camelids.

scientific article published on 11 July 2017

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