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List of works by Geraint B Rogers

150 Siblings of Crohn's Disease Patients Exhibit a Pathologically Relevant Dysbiosis: Examination of Mucosal Microbiota Communities Using 16S rRNA Gene Pyrosequencing

scientific article published in May 2014

A novel microbiota stratification system predicts future exacerbations in bronchiectasis

scientific article (publication date: May 2014)

A relationship between Pseudomonal growth behaviour and cystic fibrosis patient lung function identified in a metabolomic investigation.

scientific article published on December 2013

Acute Colitis Drives Tolerance by Persistently Altering the Epithelial Barrier and Innate and Adaptive Immunity

scientific article published on 01 June 2019

Add-on azithromycin reduces sputum cytokines in non-eosinophilic asthma: an AMAZES substudy

scientific article published on 07 January 2021

Adult non-cystic fibrosis bronchiectasis is characterised by airway luminal Th17 pathway activation

scientific article

Airway abundance of Haemophilus influenzae predicts response to azithromycin in adults with persistent uncontrolled asthma

scientific article published on 04 May 2020

Airway microbiome studies challenge simplistic models of inhaled tobramycin benefit

scientific article published on 02 November 2020

Analysis of the bacterial communities present in lungs of patients with cystic fibrosis from American and British centers

scientific article

Antibiotic exposure and interpersonal variance mask the effect of ivacaftor on respiratory microbiota composition

scientific article published on 14 October 2017

Antibiotic stewardship in aged care facilities

scientific article published on 01 October 2018

Ascites bacterial burden and immune cell profile are associated with poor clinical outcomes in the absence of overt infection

scientific article

Ascitic microbiota composition is correlated with clinical severity in cirrhosis with portal hypertension

scientific article published in 2013

Assessing the diagnostic importance of nonviable bacterial cells in respiratory infections

scientific article published on 9 August 2008

B Part of It study: a longitudinal study to assess carriage of Neisseria meningitidis in first year university students in South Australia

scientific article published on 4 December 2018

Bacterial activity in cystic fibrosis lung infections

scientific article

Bacterial community diversity in cultures derived from healthy and inflamed ileal pouches after restorative proctocolectomy

scientific article published in December 2009

Bacterial diversity in cases of lung infection in cystic fibrosis patients: 16S ribosomal DNA (rDNA) length heterogeneity PCR and 16S rDNA terminal restriction fragment length polymorphism profiling.

scientific article published on August 2003

Bacterial viability in faecal transplants: Which bacteria survive?

scientific article published on 19 February 2019

Burkholderia lata Infections from Intrinsically Contaminated Chlorhexidine Mouthwash, Australia, 2016

article

Case report: Identification of intra-laboratory blood culture contamination with Staphylococcus aureus by whole genome sequencing

scientific article published on 23 February 2019

Challenges and opportunities for faecal microbiota transplantation therapy

scientific article published on 05 June 2013

Changes in the Composition of the Gut Microbiota and the Blood Transcriptome in Preterm Infants at Less than 29 Weeks Gestation Diagnosed with Bronchopulmonary Dysplasia

scientific article published on 29 October 2019

Characterisation of bacteria in ascites—reporting the potential of culture-independent, molecular analysis

scientific article published on 18 March 2010

Characterization of bacterial community diversity in chronic rhinosinusitis infections using novel culture-independent techniques.

scientific article published in July 2011

Chromosomal genes conferring tolerance to heavy metal (Ag) toxicity

scientific article published on 15 August 2008

Clinical and symptom scores are significantly correlated with fecal microbiota features in patients with symptomatic uncomplicated diverticular disease

scientific article published in January 2018

Clinical measures of disease in adult non-CF bronchiectasis correlate with airway microbiota composition

scientific article published on 6 April 2013

Combined systems approaches reveal highly plastic responses to antimicrobial peptide challenge in Escherichia coli

scientific article

Comparing the microbiota of the cystic fibrosis lung and human gut.

scientific article published on 29 January 2010

Complexity, temporal stability, and clinical correlates of airway bacterial community composition in primary ciliary dyskinesia.

scientific article

Corrections. The effect of long-term macrolide treatment on respiratory microbiota composition in non-cystic fibrosis bronchiectasis: an analysis from the randomised, double-blind, placebo-controlled BLESS trial

scientific article published on 17 March 2015

Culture-Independent Detection of Nontuberculous Mycobacteria in Clinical Respiratory Samples

scientific article published on 13 July 2016

DNA extraction approaches substantially influence the assessment of the human breast milk microbiome

scientific article published on 10 January 2020

Deriving accurate microbiota profiles from human samples with low bacterial content through post-sequencing processing of Illumina MiSeq data.

scientific article

Determining cystic fibrosis-affected lung microbiology: comparison of spontaneous and serially induced sputum samples by use of terminal restriction fragment length polymorphism profiling

scientific article

Divergent Relationships between Fecal Microbiota and Metabolome following Distinct Antibiotic-Induced Disruptions.

scientific article published on January 2017

Do we really understand how faecal microbiota transplantation works? Authors' reply

scientific article published on 19 March 2019

Does bacterial density in cystic fibrosis sputum increase prior to pulmonary exacerbation?

scientific article

Draft Genome Sequence of a Non-O1/O139 Vibrio cholerae Strain Isolated from a Patient Presenting with Dysuria

scientific article published on 26 July 2018

Draft Genome Sequences of Two Enterobacter cloacae subsp. cloacae Strains Isolated from Australian Hematology Patients with Bacteremia

scientific article published on 17 August 2017

Effect of azithromycin on asthma exacerbations and quality of life in adults with persistent uncontrolled asthma (AMAZES): a randomised, double-blind, placebo-controlled trial.

scientific article

Effects of almond consumption on metabolic function and liver fat in overweight and obese adults with elevated fasting blood glucose: A randomised controlled trial

scientific article published on 11 January 2019

Enhancing the utility of existing antibiotics by targeting bacterial behaviour?

scientific article published in February 2012

Examining the Evidence for an Adult Healthy Middle Ear Microbiome

scientific article published on 04 September 2019

Exploring the parallel development of microbial systems in neonates with cystic fibrosis

scientific article

FUT2 genotype influences lung function, exacerbation frequency and airway microbiota in non-CF bronchiectasis.

scientific article published on 8 August 2016

From gut dysbiosis to altered brain function and mental illness: mechanisms and pathways

scientific article published on 19 April 2016

Functional divergence in gastrointestinal microbiota in physically-separated genetically identical mice

scientific article

Germs and joints: the contribution of the human microbiome to rheumatoid arthritis

scientific article published on August 2015

Host-microbiome interactions in acute and chronic respiratory infections

scientific article

How can the cystic fibrosis respiratory microbiome influence our clinical decision-making?

scientific article published on 03 August 2017

Impact of Long-Term Erythromycin Therapy on the Oropharyngeal Microbiome and Resistance Gene Reservoir in Non-Cystic Fibrosis Bronchiectasis.

scientific article published on 18 April 2018

Impact of antibiotic treatment for pulmonary exacerbations on bacterial diversity in cystic fibrosis.

scientific article

Implications of multiple freeze-thawing on respiratory samples for culture-independent analyses

scientific article

Improving Risk-Benefit in Faecal Transplantation through Microbiome Screening

scientific article published on 15 January 2020

Inbred Mouse Populations Exhibit Intergenerational Changes in Intestinal Microbiota Composition and Function Following Introduction to a Facility.

scientific article published on 11 April 2017

Inclusivity and equity in human microbiome research

scientific article published on 01 February 2019

Infection's Sweet Tooth: How Glycans Mediate Infection and Disease Susceptibility.

scientific article

Inflammasome signaling affects anxiety- and depressive-like behavior and gut microbiome composition

scientific article published on 19 April 2016

Inflammation, age and changing microbiology: the search for causation in the cystic fibrosis airways

scientific article published on 16 November 2017

Inflammatory phenotypes in patients with severe asthma are associated with distinct airway microbiology.

scientific article published on 4 May 2017

Interpreting infective microbiota: the importance of an ecological perspective.

scientific article

Intestinal Microbiota Composition in Sudden Infant Death Syndrome and Age-Matched Controls

scientific article

Intestinal microbiology and urinary tract infection associated risk in long-term aged care residents

scientific article published on 16 August 2024

Intestinal microbiology shapes population health impacts of diet and lifestyle risk exposures in Torres Strait Islander communities

scientific article published on 19 October 2020

Is it time to rethink syphilis control?

scientific article

Lean NAFLD: A Distinct Entity Shaped by Differential Metabolic Adaptation

scientific article published on 24 January 2020

Long-Term Azithromycin Reduces Haemophilus influenzae and Increases Antibiotic Resistance in Severe Asthma

scientific article published on 01 August 2019

Long-term cultivation-independent microbial diversity analysis demonstrates that bacterial communities infecting the adult cystic fibrosis lung show stability and resilience

scientific article

Low-Dose Nitric Oxide as Targeted Anti-biofilm Adjunctive Therapy to Treat Chronic Pseudomonas aeruginosa Infection in Cystic Fibrosis

scientific article

Lung function and microbiota diversity in cystic fibrosis

scientific article published on 02 April 2020

Lung infections in cystic fibrosis: deriving clinical insight from microbial complexity

scientific article published on March 2010

Macrolide Treatment Inhibits Pseudomonas aeruginosa Quorum Sensing in Non-Cystic Fibrosis Bronchiectasis. An Analysis from the Bronchiectasis and Low-Dose Erythromycin Study Trial.

scientific article published on 27 July 2016

Matrix metalloproteinases vary with airway microbiota composition and lung function in non-cystic fibrosis bronchiectasis

scientific article

Mice lacking Casp1, Ifngr and Nos2 genes exhibit altered depressive- and anxiety-like behaviour, and gut microbiome composition

article

Microbiology review series: CF microbiology - -Towards 2020 and beyond

scientific article published on 12 April 2015

Molecular detection of CF lung pathogens: current status and future potential

scientific article published on 10 February 2013

National Trends in Antibiotic Use in Australian Residential Aged Care Facilities, 2005-2016

scientific article published on 27 May 2020

Neuroimmunomodulation in Major Depressive Disorder: Focus on Caspase 1, Inducible Nitric Oxide Synthase, and Interferon-Gamma

scientific article published on 10 October 2018

New methods for detecting and identifying bacteria

scientific article published on 15 July 2015

Next-generation sequencing in the analysis of human microbiota: essential considerations for clinical application.

scientific article

Not Just Antibiotics: Is Cancer Chemotherapy Driving Antimicrobial Resistance?

scientific article published on 13 November 2017

Novel concepts in evaluating antimicrobial therapy for bacterial lung infections in patients with cystic fibrosis

scientific article published on 19 July 2011

Opportunistic bacteria confer the ability to ferment prebiotic starch in the adult cystic fibrosis gut

scientific article published on 25 October 2018

Optimisation of a propidium monoazide based method to determine the viability of microbes in faecal slurries for transplantation

scientific article published on 04 December 2018

PPARγ is reduced in the airways of non-CF bronchiectasis subjects and is inversely correlated with the presence of Pseudomonas aeruginosa

scientific article published in PLoS ONE

Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities

scientific article

Potentially pathogenic airway bacteria and neutrophilic inflammation in treatment resistant severe asthma

scientific article published on 23 June 2014

Precision respiratory medicine and the microbiome

scientific article published on 11 December 2015

Predominant pathogen competition and core microbiota divergence in chronic airway infection

scientific article

Protect commensal gut bacteria to improve antimicrobial stewardship

scientific article published on 28 March 2020

Reducing bias in bacterial community analysis of lower respiratory infections

scientific article published on 29 November 2012

Republished: Respiratory microbiota: addressing clinical questions, informing clinical practice

scientific article published in August 2015

Respiratory microbiota resistance and resilience to pulmonary exacerbation and subsequent antimicrobial intervention

scientific article published on 10 November 2015

Respiratory microbiota: addressing clinical questions, informing clinical practice

scientific article published on 17 July 2014

Revealing the dynamics of polymicrobial infections: implications for antibiotic therapy

scientific article

Role of Dietary Flavonoid Compounds in Driving Patterns of Microbial Community Assembly

scientific article published on 24 September 2019

Safety and Efficacy of Using Nuts to Improve Bowel Health in Hemodialysis Patients

scientific article published on 27 January 2020

Sample storage conditions significantly influence faecal microbiome profiles.

scientific article published on 17 November 2015

Siblings of patients with Crohn's disease exhibit a biologically relevant dysbiosis in mucosal microbial metacommunities

scientific article published on 8 April 2015

Soluble fibre supplementation with and without a probiotic in adults with asthma: A 7-day randomised, double blind, three way cross-over trial

scientific article published on 31 July 2019

Staphylococcus aureus small-colony variants are independently associated with worse lung disease in children with cystic fibrosis

scientific article published on 26 April 2013

Study protocol for a 9-month randomised controlled trial assessing the effects of almonds versus carbohydrate-rich snack foods on weight loss and weight maintenance

scientific article published on 19 July 2020

Studying bacteria in respiratory specimens by using conventional and molecular microbiological approaches

scientific article

Studying bacterial infections through culture-independent approaches.

scientific article published on 25 June 2009

The CF gastrointestinal microbiome: Structure and clinical impact

scientific article published on October 2016

The Capacity of the Fecal Microbiota From Malawian Infants to Ferment Resistant Starch

scientific article published on 26 June 2019

The Diverse Metabolic Roles of Peripheral Serotonin.

scientific article published on March 2017

The Influence of the Gut Microbiome on Host Metabolism Through the Regulation of Gut Hormone Release

scientific article published on 16 April 2019

The Microbiota-Inflammasome Hypothesis of Major Depression

The contribution of respiratory microbiome analysis to a treatable traits model of care

article

The cystic fibrosis gut as a potential source of multidrug resistant pathogens

scientific article published on 26 November 2020

The effect of long-term macrolide treatment on respiratory microbiota composition in non-cystic fibrosis bronchiectasis: an analysis from the randomised, double-blind, placebo-controlled BLESS trial.

scientific article

The exclusion of dead bacterial cells is essential for accurate molecular analysis of clinical samples

scientific article published in November 2010

The gut microbiome regulates host glucose homeostasis via peripheral serotonin

scientific article published on 16 September 2019

The human microbiome: opportunities and challenges for clinical care

scientific article

The impact of CFTR modulator therapies on CF airway microbiology

scientific article published on 12 August 2019

The microbiome of otitis media with effusion in Indigenous Australian children.

scientific article published on 17 July 2015

The nasopharyngeal microbiome and LRTIs in infants

scientific article published on 15 March 2019

The use of culture-independent tools to characterize bacteria in endo-tracheal aspirates from pre-term infants at risk of bronchopulmonary dysplasia

scientific article published in May 2010

Three clinically distinct chronic pediatric airway infections share a common core microbiota

scientific article

Time between collection and storage significantly influences bacterial sequence composition in sputum samples from cystic fibrosis respiratory infections

scientific article

Total bacterial load, inflammation, and structural lung disease in paediatric cystic fibrosis

scientific article published on 18 March 2020

Understanding the impact of antibiotic therapies on the respiratory tract resistome: a novel pooled-template metagenomic sequencing strategy

scientific article published on 09 August 2018

Use of 16S rRNA gene profiling by terminal restriction fragment length polymorphism analysis to compare bacterial communities in sputum and mouthwash samples from patients with cystic fibrosis.

scientific article published on July 2006

Using bacterial biomarkers to identify early indicators of cystic fibrosis pulmonary exacerbation onset

scientific article

characterization of bacterial community diversity in cystic fibrosis lung infections by use of 16s ribosomal DNA terminal restriction fragment length polymorphism profiling

scientific article

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