List of works - Carolyn A Young

A complex gene cluster for indole-diterpene biosynthesis in the grass endophyte Neotyphodium lolii

scientific article (publication date: October 2006)

A mutualistic endophyte alters the niche dimensions of its host plant

scientific article

A polyketide synthase gene required for biosynthesis of the aflatoxin-like toxin, dothistromin.

scientific article published in May 2006

Abundant degenerate miniature inverted-repeat transposable elements in genomes of epichloid fungal endophytes of grasses

scientific article published on 26 September 2011

Alkaloid variation among epichloid endophytes of sleepygrass (Achnatherum robustum) and consequences for resistance to insect herbivores

scientific article published on 11 December 2014

Characterization of Epichloë coenophiala within the US: are all tall fescue endophytes created equal?

scientific article

Chromosome-Level Reference Genome of Venturia effusa, Causative Agent of Pecan Scab

scientific article published on 02 December 2019

Correction: Krauss, J., et al. Epichloë Endophyte Infection Rates and Alkaloid Content in Commercially Available Grass Seed Mixtures in Europe. Microorganisms 2020, 8, 498

scientific article published on 21 October 2020

Cross-species transcriptomics identifies core regulatory changes differentiating the asymptomatic asexual and virulent sexual life cycles of grass-symbiotic <i>Epichloë</i> fungi

scientific article published in 2022

Deletion and gene expression analyses define the paxilline biosynthetic gene cluster in Penicillium paxilli

scientific article

Digital imaging to evaluate root system architectural changes associated with soil biotic factors

scholarly article published 23 December 2018

Disparate independent genetic events disrupt the secondary metabolism gene perA in certain symbiotic Epichloë species

scientific article

Disruption of calcineurin catalytic subunit (cnaA) in Epichloë festucae induces symbiotic defects and intrahyphal hyphae formation

scientific article

Effector genomics accelerates discovery and functional profiling of potato disease resistance and phytophthora infestans avirulence genes

scientific article

Effects of selected endophyte and tall fescue cultivar combinations on steer grazing performance, indicators of fescue toxicosis, feedlot performance, and carcass traits

scientific article published on 9 October 2012

Endophytic Epichloë species and their grass hosts: from evolution to applications

scientific article

Epichloe canadensis, a new interspecific epichloid hybrid symbiotic with Canada wildrye (Elymus canadensis).

scientific article

Epichloë Endophyte Infection rates and Alkaloid Content in Commercially Available Grass Seed Mixtures in Europe

scientific article published on 31 March 2020

Epichloë Endophytes: Models of an Ecological Strategy

Ether bridge formation in loline alkaloid biosynthesis.

scientific article published on 26 December 2013

Evidence for sexual reproduction: identification, frequency and spatial distribution of Venturia effusa (pecan scab) mating type idiomorphs

scientific article published on 30 January 2018

Fine-Scale Population Genetic Structure and Within-Tree Distribution of Mating Types of Venturia effusa, Cause of Pecan Scab in the United States

scientific article published on 24 September 2018

First description of the sexual stage of Venturia effusa, causal agent of pecan scab

scientific article published on 29 May 2020

Forages and pastures symposium: fungal endophytes of tall fescue and perennial ryegrass: pasture friend or foe?

scientific article

Genetic Manipulation of Clavicipitalean Endophytes

Genetics, genomics and evolution of ergot alkaloid diversity

scientific article

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

scientific article

Genotypic and chemotypic diversity of Neotyphodium endophytes in tall fescue from Greece.

scientific article

Highly Sensitive End-Point PCR and SYBR Green qPCR Detection of Phymatotrichopsis omnivora, Causal Fungus of Cotton Root Rot

scientific article published on 01 September 2014

In planta expression screens of Phytophthora infestans RXLR effectors reveal diverse phenotypes, including activation of the Solanum bulbocastanum disease resistance protein Rpi-blb2.

scientific article

Indole-diterpene biosynthetic capability of epichloë endophytes as predicted by ltm gene analysis ⬇️

scientific article

Infection Rates and Alkaloid Patterns of Different Grass Species with Systemic Epichloë Endophytes

scientific article published on 14 August 2019

Interspecific and intraspecific hybrid Epichloë species symbiotic with the North American native grass Poa alsodes.

scientific article published on 26 June 2017

Interspecific hybridization and bioactive alkaloid variation increases diversity in endophytic Epichloë species of Bromus laevipes

scientific article published on 26 August 2014

Long-term ungulate exclusion reduces fungal symbiont prevalence in native grasslands

scientific article published on 25 April 2016

Metabolism or behavior: explaining the performance of aphids on alkaloid-producing fungal endophytes in annual ryegrass (Lolium multiflorum).

scientific article

Molecular analysis of two cytochrome P450 monooxygenase genes required for paxilline biosynthesis in Penicillium paxilli, and effects of paxilline intermediates on mammalian maxi-K ion channels.

scientific article published on 18 July 2003

Molecular and Genetic Analysis of Lolitrem and Peramine Biosynthetic Pathways in Epkhloë Festucae

Molecular cloning and genetic analysis of a symbiosis-expressed gene cluster for lolitrem biosynthesis from a mutualistic endophyte of perennial ryegrass

scientific article published in July 2005

Molecular cloning and genetic analysis of an indole-diterpene gene cluster from Penicillium paxilli ⬇️

scientific article

Molecular identification and characterization of endophytes from uncultivated barley

scientific article published on 01 May 2018

Nucleotide sequence of Rhizobium loti nodI.

scientific article published on November 1990

Orthologous peramine and pyrrolopyrazine‐producing biosynthetic gene clusters in Metarhizium rileyi , Metarhizium majus and Cladonia grayi

article

Paxilline negative mutants of Penicillium paxilli generated by heterologous and homologous plasmid integration

1998 master's thesis by Carolyn Anne Young at Massey University

Paxilline-negative mutants of Penicillium paxilli generated by heterologous and homologous plasmid integration

scientific article

Phymatotrichum (cotton) root rot caused by Phymatotrichopsis omnivora: retrospects and prospects.

scientific article published on May 2010

Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the clavicipitaceae reveals dynamics of alkaloid loci

scientific article published in 2013

Population Genetic Structure of Venturia effusa, Cause of Pecan Scab, in the Southeastern United States

scientific article published on 21 March 2017

Prevalence of an intraspecific Neotyphodium hybrid in natural populations of stout wood reed (Cinna arundinacea L.) from eastern North America

scientific article published on 31 August 2010

Repeat elements organize 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae

article

Structural analysis of a peptide synthetase gene required for ergopeptine production in the endophytic fungus Neotyphodium lolii

scientific article

Supervised Classification of RGB Aerial Imagery to Evaluate the Impact of a Root Rot Disease

article by Chakradhar Mattupalli et al published 10 June 2018 in Remote Sensing

Telomere-to-Telomere Genome Sequences across a Single Genus Reveal Highly Variable Chromosome Rearrangement Rates but Absolute Stasis of Chromosome Number

The C-terminal half of Phytophthora infestans RXLR effector AVR3a is sufficient to trigger R3a-mediated hypersensitivity and suppress INF1-induced cell death in Nicotiana benthamiana.

scientific article published on 12 September 2006

The Effect of Endophytic Fungi on Nematode Populations in Summer-dormant and Summer-active Tall Fescue

scientific article published on June 2016

The genetic basis for indole-diterpene chemical diversity in filamentous fungi

scientific article published on 30 June 2007

The indole-diterpene gene cluster from the ryegrass endophyte, Neotyphodium lolii, is required for the biosynthesis of lolitrem B, a bioprotective alkaloid

2005 doctoral thesis by Carolyn Anne Young at Massey University

The malarial host-targeting signal is conserved in the Irish potato famine pathogen

scientific article

Toxin-producing Epichloë bromicola strains symbiotic with the forage grass Elymus dahuricus in China.

scientific article

Two distinct Epichloë species symbiotic with Achnatherum inebrians, drunken horse grass

scientific article

Variation Among Orchardgrass (Dactylis glomerata) Germplasm for Choke Prevalence Caused by Epichloë typhina

scientific article published on 04 December 2018

Variation in the Prevalence and Transmission of Heritable Symbionts Across Host Populations in Heterogeneous Environments

scientific article published on 17 March 2017

Vegetative hyphal fusion and subsequent nuclear behavior in Epichloë grass endophytes

scientific article published on 2 April 2015

List of works by Carolyn A Young

A complex gene cluster for indole-diterpene biosynthesis in the grass endophyte Neotyphodium lolii

A mutualistic endophyte alters the niche dimensions of its host plant

A polyketide synthase gene required for biosynthesis of the aflatoxin-like toxin, dothistromin.

Abundant degenerate miniature inverted-repeat transposable elements in genomes of epichloid fungal endophytes of grasses

Alkaloid variation among epichloid endophytes of sleepygrass (Achnatherum robustum) and consequences for resistance to insect herbivores

Characterization of Epichloë coenophiala within the US: are all tall fescue endophytes created equal?

Chromosome-Level Reference Genome of Venturia effusa, Causative Agent of Pecan Scab

Correction: Krauss, J., et al. Epichloë Endophyte Infection Rates and Alkaloid Content in Commercially Available Grass Seed Mixtures in Europe. Microorganisms 2020, 8, 498

Cross-species transcriptomics identifies core regulatory changes differentiating the asymptomatic asexual and virulent sexual life cycles of grass-symbiotic <i>Epichloë</i> fungi

Deletion and gene expression analyses define the paxilline biosynthetic gene cluster in Penicillium paxilli

Digital imaging to evaluate root system architectural changes associated with soil biotic factors

Disparate independent genetic events disrupt the secondary metabolism gene perA in certain symbiotic Epichloë species

Disruption of calcineurin catalytic subunit (cnaA) in Epichloë festucae induces symbiotic defects and intrahyphal hyphae formation

Effector genomics accelerates discovery and functional profiling of potato disease resistance and phytophthora infestans avirulence genes

Effects of selected endophyte and tall fescue cultivar combinations on steer grazing performance, indicators of fescue toxicosis, feedlot performance, and carcass traits

Endophytic Epichloë species and their grass hosts: from evolution to applications

Epichloe canadensis, a new interspecific epichloid hybrid symbiotic with Canada wildrye (Elymus canadensis).

Epichloë Endophyte Infection rates and Alkaloid Content in Commercially Available Grass Seed Mixtures in Europe

Epichloë Endophytes: Models of an Ecological Strategy

Ether bridge formation in loline alkaloid biosynthesis.

Evidence for sexual reproduction: identification, frequency and spatial distribution of Venturia effusa (pecan scab) mating type idiomorphs

Fine-Scale Population Genetic Structure and Within-Tree Distribution of Mating Types of Venturia effusa, Cause of Pecan Scab in the United States

First description of the sexual stage of Venturia effusa, causal agent of pecan scab

Forages and pastures symposium: fungal endophytes of tall fescue and perennial ryegrass: pasture friend or foe?

Genetic Manipulation of Clavicipitalean Endophytes

Genetics, genomics and evolution of ergot alkaloid diversity

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

Genotypic and chemotypic diversity of Neotyphodium endophytes in tall fescue from Greece.

Highly Sensitive End-Point PCR and SYBR Green qPCR Detection of Phymatotrichopsis omnivora, Causal Fungus of Cotton Root Rot

In planta expression screens of Phytophthora infestans RXLR effectors reveal diverse phenotypes, including activation of the Solanum bulbocastanum disease resistance protein Rpi-blb2.

Indole-diterpene biosynthetic capability of epichloë endophytes as predicted by ltm gene analysis ⬇️

Infection Rates and Alkaloid Patterns of Different Grass Species with Systemic Epichloë Endophytes

Interspecific and intraspecific hybrid Epichloë species symbiotic with the North American native grass Poa alsodes.

Interspecific hybridization and bioactive alkaloid variation increases diversity in endophytic Epichloë species of Bromus laevipes

Long-term ungulate exclusion reduces fungal symbiont prevalence in native grasslands

Metabolism or behavior: explaining the performance of aphids on alkaloid-producing fungal endophytes in annual ryegrass (Lolium multiflorum).

Molecular analysis of two cytochrome P450 monooxygenase genes required for paxilline biosynthesis in Penicillium paxilli, and effects of paxilline intermediates on mammalian maxi-K ion channels.

Molecular and Genetic Analysis of Lolitrem and Peramine Biosynthetic Pathways in Epkhloë Festucae

Molecular cloning and genetic analysis of a symbiosis-expressed gene cluster for lolitrem biosynthesis from a mutualistic endophyte of perennial ryegrass

Molecular cloning and genetic analysis of an indole-diterpene gene cluster from Penicillium paxilli ⬇️

Molecular identification and characterization of endophytes from uncultivated barley

Nucleotide sequence of Rhizobium loti nodI.

Orthologous peramine and pyrrolopyrazine‐producing biosynthetic gene clusters in Metarhizium rileyi , Metarhizium majus and Cladonia grayi

Paxilline negative mutants of Penicillium paxilli generated by heterologous and homologous plasmid integration

Paxilline-negative mutants of Penicillium paxilli generated by heterologous and homologous plasmid integration

Phymatotrichum (cotton) root rot caused by Phymatotrichopsis omnivora: retrospects and prospects.

Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the clavicipitaceae reveals dynamics of alkaloid loci

Population Genetic Structure of Venturia effusa, Cause of Pecan Scab, in the Southeastern United States

Prevalence of an intraspecific Neotyphodium hybrid in natural populations of stout wood reed (Cinna arundinacea L.) from eastern North America

Repeat elements organize 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae

Structural analysis of a peptide synthetase gene required for ergopeptine production in the endophytic fungus Neotyphodium lolii

Supervised Classification of RGB Aerial Imagery to Evaluate the Impact of a Root Rot Disease

Telomere-to-Telomere Genome Sequences across a Single Genus Reveal Highly Variable Chromosome Rearrangement Rates but Absolute Stasis of Chromosome Number

The C-terminal half of Phytophthora infestans RXLR effector AVR3a is sufficient to trigger R3a-mediated hypersensitivity and suppress INF1-induced cell death in Nicotiana benthamiana.

The Effect of Endophytic Fungi on Nematode Populations in Summer-dormant and Summer-active Tall Fescue

The genetic basis for indole-diterpene chemical diversity in filamentous fungi

The indole-diterpene gene cluster from the ryegrass endophyte, Neotyphodium lolii, is required for the biosynthesis of lolitrem B, a bioprotective alkaloid

The malarial host-targeting signal is conserved in the Irish potato famine pathogen

Toxin-producing Epichloë bromicola strains symbiotic with the forage grass Elymus dahuricus in China.

Two distinct Epichloë species symbiotic with Achnatherum inebrians, drunken horse grass

Variation Among Orchardgrass (Dactylis glomerata) Germplasm for Choke Prevalence Caused by Epichloë typhina

Variation in the Prevalence and Transmission of Heritable Symbionts Across Host Populations in Heterogeneous Environments

Vegetative hyphal fusion and subsequent nuclear behavior in Epichloë grass endophytes