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List of works by Takeshi Ara

A new mouse model for noninvasive fluorescence-based monitoring of mitochondrial UCP1 expression

scientific article published on 20 May 2019

ASTD: The Alternative Splicing and Transcript Diversity database

scientific article

An application of a relational database system for high-throughput prediction of elemental compositions from accurate mass values

scientific article

Apo-12'-lycopenal, a Lycopene Metabolite, Promotes Adipocyte Differentiation via Peroxisome Proliferator-Activated Receptor γ Activation

scientific article published on 04 December 2018

Beyond the 3' end: experimental validation of extended transcript isoforms

scientific article published on 4 March 2007

Complete genome sequence and comparative analysis of Shewanella violacea, a psychrophilic and piezophilic bacterium from deep sea floor sediments

scientific article published on 11 May 2010

Complete nucleotide sequence of plasmid Rts1: implications for evolution of large plasmid genomes

scientific article published on June 2002

Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research

scientific article (publication date: 2005)

Conservation of Translation Initiation Sites Based on Dinucleotide Frequency and Codon Usage in Escherichia coli K-12 (W3110): Non-random Distribution of A/T-rich Sequences Immediately Upstream of the Translation Initiation Codon

scientific article published on 01 February 2002

Conservation of alternative polyadenylation patterns in mammalian genes

scientific article

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

scientific article

Development of KaPPA-View4 for omics studies on Jatropha and a database system KaPPA-Loader for construction of local omics databases

article

Distribution of Repetitive Sequences on the Leading and Lagging Strands of the Escherichia coli Genome: Comparative Study of Long Direct Repeat (LDR) Sequences

scientific article published on 01 February 2002

Endoplasmic Reticulum Stress Impaired Uncoupling Protein 1 Expression via the Suppression of Peroxisome Proliferator-Activated Receptor γ Binding Activity in Mice Beige Adipocytes ⬇️

scientific article published on 11 January 2019

FlavonoidSearch: A system for comprehensive flavonoid annotation by mass spectrometry

scientific article

Genome-wide analysis of deoxyadenosine methyltransferase-mediated control of gene expression in Escherichia coli

scientific article

Improvement of the quantitative differential metabolome pipeline for gas chromatography-mass spectrometry data by automated reliable peak selection

KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and metabolite co-accumulation and omics data

scientific article

Large-scale identification of protein-protein interaction of Escherichia coli K-12

scientific article

MassBank: a public repository for sharing mass spectral data for life sciences

scientific article (publication date: 7 July 2010)

MatchedIonsFinder: A software tool for revising alignment matrices of spectrograms from liquid chromatography-mass spectrometry

article

Non-radioactive Adenosine 5′-Phosphosulfate Sulfotransferase Assay by Coupling with Sulfite Reductase andO-Acetylserine(thiol)lyase

scientific article published on 01 April 1997

Over-expression of PPARα in obese mice adipose tissue improves insulin sensitivity.

scientific article published on 15 September 2017

Pathway-specific metabolome analysis with 18O2-labeled Medicago truncatula via a mass spectrometry-based approach.

scientific article published on 11 May 2018

Purification and characterization of adenosine 5′-phosphosulfate sulfotransferase of radish seedlings

Soy hydrolysate enhances the isoproterenol-stimulated lipolytic pathway through an increase in β-adrenergic receptor expression in adipocytes

scientific article published on 02 May 2019

TOMATOMET: A metabolome database consists of 7118 accurate mass values detected in mature fruits of 25 tomato cultivars

scientific article published in 2021

The Mevalonate Pathway Is Indispensable for Adipocyte Survival

scientific article published on 21 October 2018

The dipeptidyl peptidase-4 (DPP-4) inhibitor teneligliptin enhances brown adipose tissue function, thereby preventing obesity in mice

scientific article published on 19 September 2018

The disparate nature of "intergenic" polyadenylation sites

scientific article

Tools and databases of the KOMICS web portal for preprocessing, mining, and dissemination of metabolomics data.

scientific article

Using Alu elements as polyadenylation sites: A case of retroposon exaptation.

scientific article

Wide-range screening of anti-inflammatory compounds in tomato using LC-MS and elucidating the mechanism of their functions.

scientific article published on 12 January 2018

β-adrenergic Receptor Stimulation Revealed a Novel Regulatory Pathway via Suppressing Histone Deacetylase 3 to Induce Uncoupling Protein 1 Expression in Mice Beige Adipocyte

scientific article published on 17 August 2018

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