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Authors whose works are in public domain in at least one jurisdiction

List of works by Folker Meyer

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The RAST Server: rapid annotations using subsystems technology

scientific article
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

scientific article
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

scientific article
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

2012 scientific article
GenDB--an open source genome annotation system for prokaryote genomes

scientific article
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins

scientific article
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

scientific article
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

scientific article
Metagenomics - a guide from sampling to data analysis

scientific article
A Predator Unmasked: Life Cycle of Bdellovibrio bacteriovorus from a Genomic Perspective

scientific article
Insights into Genome Plasticity and Pathogenicity of the Plant Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria Revealed by the Complete Genome Sequence

scientific article
Complete genome sequence of the myxobacterium Sorangium cellulosum

scientific article
Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis

scientific article
Using the metagenomics RAST server (MG-RAST) for analyzing shotgun metagenomes

scientific article published in January 2010
Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter

scientific article published on December 2006
The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes

scientific article
Complete genome sequence and analysis of Wolinella succinogenes

scientific article
Unlocking the potential of metagenomics through replicated experimental design

scientific article published on 7 June 2012
Genome of the Epsilonproteobacterial Chemolithoautotroph Sulfurimonas denitrificans

scientific article
The Genomic Standards Consortium

scientific article (publication date: June 2011)
The Earth Microbiome Project: Meeting report of the "1 EMP meeting on sample selection and acquisition" at Argonne National Laboratory October 6 2010.

scientific article
KBase: The United States Department of Energy Systems Biology Knowledgebase

article
The genome of deep-sea vent chemolithoautotroph Thiomicrospira crunogena XCL-2

scientific article
The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools

scientific article
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora

scientific article
Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains

scientific article published in August 2014
Structure, fluctuation and magnitude of a natural grassland soil metagenome

scientific article
FIGfams: yet another set of protein families

scientific article published on 17 September 2009
MG-RAST, a Metagenomics Service for Analysis of Microbial Community Structure and Function

scientific article
Bacterial community structure and functional contributions to emergence of health or necrotizing enterocolitis in preterm infants

scientific article published on 10 July 2013
Intestinal tissues induce an SNP mutation in Pseudomonas aeruginosa that enhances its virulence: possible role in anastomotic leak

scientific article published in 2012
EMMA: a platform for consistent storage and efficient analysis of microarray data

scientific article
Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

scientific article
The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation

scientific article published on December 2006
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity

scientific article (publication date: March 2008)
Development of joint application strategies for two microbial gene finders

scientific article published on 26 February 2004
Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression

article
Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes

scientific article published on 25 August 2006
Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula

scientific article published in March 2004
Construction of a large signature-tagged mini-Tn5 transposon library and its application to mutagenesis of Sinorhizobium meliloti

scientific article published in June 2006
Hybrid pathogenicity island PAGI-5 contributes to the highly virulent phenotype of a Pseudomonas aeruginosa isolate in mammals

scientific article published on 29 August 2008
The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae

scientific article
Finding novel genes in bacterial communities isolated from the environment

article
Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes

scientific article published in August 2005
A platform-independent method for detecting errors in metagenomic sequencing data: DRISEE.

scientific article
From genomics to metagenomics

scientific article
The complete genome sequence for putative H₂- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome

scientific article
REGANOR

scientific article published on 01 January 2006
Annotation of bacterial and archaeal genomes: improving accuracy and consistency

scientific article published on 21 July 2007
Maternal activation of gap genes in the hover fly Episyrphus

scientific article published in May 2010

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