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List of works by Hiroyuki Ohta

12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis.

scientific article published on 28 October 2005

12-oxo-phytodienoic acid, a plant-derived oxylipin, attenuates lipopolysaccharide-induced inflammation in microglia

scientific article published on 14 April 2016

A Lipoxygenase Pathway Is Activated in Rice after Infection with the Rice Blast Fungus Magnaporthe grisea

scientific article published in September 1991

A PixD--PapB chimeric protein reveals the function of the BLUF domain C-terminal α-helices for light signal transduction

scientific article published on 30 July 2012

A chloroplastic UDP-glucose pyrophosphorylase from Arabidopsis is the committed enzyme for the first step of sulfolipid biosynthesis

scientific article published on 13 March 2009

A highly sensitive quantification method for the accumulation of alarmone ppGpp in Arabidopsis thaliana using UPLC-ESI-qMS/MS

scientific article published on 10 March 2015

A monogalactosyldiacylglycerol synthase found in the green sulfur bacterium Chlorobaculum tepidum reveals important roles for galactolipids in photosynthesis

scientific article published on 15 July 2011

A novel biclustering approach with iterative optimization to analyze gene expression data

scientific article

A novel phosphatidylcholine-hydrolyzing phospholipase C induced by phosphate starvation in Arabidopsis

scientific article

A predicted structure for the PixD-PixE complex determined by homology modeling, docking simulations, and a mutagenesis study.

scientific article published on 7 February 2013

A putative transcription factor binding to the upstream region of the puf operon in Rhodobacter sphaeroides

scientific article published in August 1993

ALCOdb: Gene Coexpression Database for Microalgae

scientific article published on 7 December 2015

ARC3, a chloroplast division factor, is a chimera of prokaryotic FtsZ and part of eukaryotic phosphatidylinositol-4-phosphate 5-kinase

scientific article

ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis

scientific article published on 27 November 2006

Accumulation of plant galactolipid affects cell morphology of Escherichia coli

scientific article published on 01 August 2001

Activation of galactolipid biosynthesis in development of pistils and pollen tubes

scientific article published on 9 January 2009

Activation of the chloroplast monogalactosyldiacylglycerol synthase MGD1 by phosphatidic acid and phosphatidylglycerol.

scientific article published on 20 December 2009

An engineered lipid remodeling system using a galactolipid synthase promoter during phosphate starvation enhances oil accumulation in plants.

scientific article published on 31 August 2015

Analysis of the complete plastid genome of the unicellular red alga Porphyridium purpureum.

scientific article

Appearance of new lipoxygenases in soybean cotyledons after germination and evidence for expression of a major new lipoxygenase gene

scientific article published on 01 January 1992

Arabidopsis lipins mediate eukaryotic pathway of lipid metabolism and cope critically with phosphate starvation.

scientific article

Arabidopsis mutants affecting oxylipin signaling in photo-oxidative stress responses

scientific article published in December 2013

Arabidopsis type B monogalactosyldiacylglycerol synthase genes are expressed during pollen tube growth and induced by phosphate starvation

scientific article published on 15 January 2004

Basic helix-loop-helix transcription factors JASMONATE-ASSOCIATED MYC2-LIKE1 (JAM1), JAM2, and JAM3 are negative regulators of jasmonate responses in Arabidopsis

scientific article

Betaine Lipid Is Crucial for Adapting to Low Temperature and Phosphate Deficiency in Nannochloropsis

scientific article published on 19 March 2018

Biochemical and physiological characterization of a BLUF protein-EAL protein complex involved in blue light-dependent degradation of cyclic diguanylate in the purple bacterium Rhodopseudomonas palustris.

scientific article published on 23 November 2010

Biochemical characterization of allene oxide synthases from the liverwort Marchantia polymorpha and green microalgae Klebsormidium flaccidum provides insight into the evolutionary divergence of the plant CYP74 family

scientific article published on 24 June 2015

Chlorophyllase as a serine hydrolase: identification of a putative catalytic triad

scientific article (publication date: 2003)

Cloning, subcellular localization and expression of CHL1, a subunit of magnesium-chelatase in soybean.

scientific article published on October 1995

Comparative genomic analysis revealed a gene for monoglucosyldiacylglycerol synthase, an enzyme for photosynthetic membrane lipid synthesis in cyanobacteria

scientific article published on 19 May 2006

Coordinated activation of metabolic pathways for antioxidants and defence compounds by jasmonates and their roles in stress tolerance in Arabidopsis

scientific article published in November 2005

Critical regulation of galactolipid synthesis controls membrane differentiation and remodeling in distinct plant organs and following environmental changes

scientific article published on 21 March 2011

Crucial role in light signal transduction for the conserved Met93 of the BLUF protein PixD/Slr1694.

scientific article

Cyanobacterial monogalactosyldiacylglycerol-synthesis pathway is involved in normal unsaturation of galactolipids and low-temperature adaptation of Synechocystis sp. PCC 6803.

scientific article published on 24 December 2013

Cytoprotective effects of 12-oxo phytodienoic acid, a plant-derived oxylipin jasmonate, on oxidative stress-induced toxicity in human neuroblastoma SH-SY5Y cells

scientific article

Degradation pathway(s) of chlorophyll: what has gene cloning revealed?

scientific article

Differential regulation of two types of monogalactosyldiacylglycerol synthase in membrane lipid remodeling under phosphate-limited conditions in sesame plants

scientific article published on 19 November 2013

Digalactosyldiacylglycerol is a major glycolipid in floral organs of Petunia hybrida.

scientific article published in October 2003

Distinctive features of plant organs characterized by global analysis of gene expression in Arabidopsis

scientific article

Domain-level identification and quantification of relative prokaryotic cell abundance in microbial communities by Micro-FTIR spectroscopy.

scientific article published on 25 August 2011

Enhancement of extraplastidic oil synthesis in Chlamydomonas reinhardtii using a type-2 diacylglycerol acyltransferase with a phosphorus starvation-inducible promoter.

scientific article published on 9 June 2014

Eukaryotic Components Remodeled Chloroplast Nucleoid Organization during the Green Plant Evolution

scientific article

Expression profiling of four RelA/SpoT-like proteins, homologues of bacterial stringent factors, in Arabidopsis thaliana

scientific article published on 6 June 2008

Gene expression analysis of wounding-induced root-to-shoot communication in Arabidopsis thaliana

scientific article published on 15 March 2011

Gene expression profiling of the tetrapyrrole metabolic pathway in Arabidopsis with a mini-array system

scientific article published in August 2004

Genome-wide expression-monitoring of jasmonate-responsive genes of Arabidopsis using cDNA arrays

scientific article published in 2000

Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S.

scientific article published on 29 July 2011

Identification and light-induced expression of a novel gene of NADPH-protochlorophyllide oxidoreductase isoform in Arabidopsis thaliana

scientific article published in June 2000

Identification of a novel cis-element exhibiting cytokinin-dependent protein binding in vitro in the 5'-region of NADPH-protochlorophyllide oxidoreductase gene in cucumber

scientific article published on 01 November 2005

Identification of two differentially regulated isoforms of protochlorophyllide oxidoreductase (POR) from tobacco revealed a wide variety of light- and development-dependent regulations of POR gene expression among angiosperms

scientific article published in January 2002

Impact of the plastidial stringent response in plant growth and stress responses.

scientific article

In vitro reconstitution of monogalactosyldiacylglycerol (MGDG) synthase regulation by thioredoxin.

scientific article

Induction of isoforms of tetrapyrrole biosynthetic enzymes, AtHEMA2 and AtFC1, under stress conditions and their physiological functions in Arabidopsis

scientific article published on 06 April 2007

Inhibition of arabidopsis hypocotyl elongation by jasmonates is enhanced under red light in phytochrome B dependent manner

scientific article published on 25 July 2012

Involvement of auxin signaling mediated by IAA14 and ARF7/19 in membrane lipid remodeling during phosphate starvation

scientific article published on 31 December 2009

Isolation of the protease component of maize cysteine protease-cystatin complex: release of cystatin is not crucial for the activation of the cysteine protease

scientific article published in July 2001

KaPPA-view: a web-based analysis tool for integration of transcript and metabolite data on plant metabolic pathway maps

scientific article

Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation

scientific article

Light and cytokinin play a co-operative role in MGDG synthesis in greening cucumber cotyledons.

scientific article published in August 2003

Light-enhanced gene expression of NADPH-protochlorophyllide oxidoreductase in cucumber.

scientific article published on May 1995

Magnesium insertion by magnesium chelatase in the biosynthesis of zinc bacteriochlorophyll a in an aerobic acidophilic bacterium Acidiphilium rubrum

scientific article published in November 1999

Manipulation of oil synthesis in Nannochloropsis strain NIES-2145 with a phosphorus starvation-inducible promoter from Chlamydomonas reinhardtii

scientific article

Mechanisms of induction of the stress-responsive transcription factors HsfA2 and DREB2A by 12-oxo-phytodienoic acid in Arabidopsis thaliana

scientific article published on 29 April 2014

Membrane lipid alteration during phosphate starvation is regulated by phosphate signaling and auxin/cytokinin cross-talk

scientific article published on 07 June 2006

Micro-FTIR spectroscopic signatures of Bacterial lipids in Proterozoic microfossils

Molecular and physiological analysis of Al³⁺ and H⁺ rhizotoxicities at moderately acidic conditions

scientific article

Monogalactosyldiacylglycerol synthesis in the outer envelope membrane of chloroplasts is required for enhanced growth under sucrose supplementation

scientific article published on 23 June 2014

NADPH-protochlorophyllide oxidoreductase in cucumber is encoded by a single gene and its expression is transcriptionally enhanced by illumination

scientific article published on 01 January 2000

Oxygenic photosynthesis without galactolipids.

scientific article

Phospholipase C5 (NPC5) is involved in galactolipid accumulation during phosphate limitation in leaves of Arabidopsis.

scientific article

Photosynthetic regulatory gene cluster in an aerobic photosynthetic bacterium, Roseobacter denitrificans

scientific article published on 01 June 1999

Phylogeny of galactolipid synthase homologs together with their enzymatic analyses revealed a possible origin and divergence time for photosynthetic membrane biogenesis.

scientific article published on 30 December 2011

Physcomitrella MADS-box genes regulate water supply and sperm movement for fertilization

scientific article published on 3 January 2018

Prediction of respective contribution of linear electron flow and PGR5-dependent cyclic electron flow to non-photochemical quenching induction

scientific article

Primitive Auxin Response without TIR1 and Aux/IAA in the Charophyte Alga Klebsormidium nitens.

scientific article

Prolamellar bodies formed by cyanobacterial protochlorophyllide oxidoreductase in Arabidopsis

scientific article published on 13 February 2009

Regulation of root greening by light and auxin/cytokinin signaling in Arabidopsis

article by Koichi Kobayashi et al published March 2012 in The Plant Cell

Role of galactolipid biosynthesis in coordinated development of photosynthetic complexes and thylakoid membranes during chloroplast biogenesis in Arabidopsis

scientific article published on 26 November 2012

TOR (target of rapamycin) is a key regulator of triacylglycerol accumulation in microalgae.

scientific article published on 8 February 2016

Target of rapamycin (TOR) plays a critical role in triacylglycerol accumulation in microalgae.

scientific article published on 8 September 2015

Temperature-dependent hyper-activation of monoglucosyldiacylglycerol synthase is post-translationally regulated in Synechocystis sp. PCC 6803.

scientific article

The KtrA and KtrE subunits are required for Na+-dependent K+ uptake by KtrB across the plasma membrane in Synechocystis sp. strain PCC 6803.

scientific article

The bacterial stringent response, conserved in chloroplasts, controls plant fertilization

scientific article published on 4 January 2008

The critical role of a hydrogen bond between Gln63 and Trp104 in the blue-light sensing BLUF domain that controls AppA activity

scientific article published on 6 March 2007

The diacylglycerol forming pathways differ among floral organs of Petunia hybrida

scientific article published on 05 November 2007

The jasmonate-responsive GTR1 transporter is required for gibberellin-mediated stamen development in Arabidopsis

scientific article

The multigenic family of monogalactosyl diacylglycerol synthases

scientific article published in December 2000

The significance of type II and PrxQ peroxiredoxins for antioxidative stress response in the purple bacterium Rhodobacter sphaeroides

scientific article published on 20 July 2007

Transcriptional regulation of thylakoid galactolipid biosynthesis coordinated with chlorophyll biosynthesis during the development of chloroplasts in Arabidopsis.

scientific article

Transcriptomic and lipidomic profiles of glycerolipids during Arabidopsis flower development

scientific article published on 28 March 2014

Two distinct isopentenyl diphosphate isomerases in cytosol and plastid are differentially induced by environmental stresses in tobacco.

scientific article

Two types of ferrochelatase in photosynthetic and nonphotosynthetic tissues of cucumber: their difference in phylogeny, gene expression, and localization

scientific article published on 23 October 2001

Type A and type B monogalactosyldiacylglycerol synthases are spatially and functionally separated in the plastids of higher plants

scientific article published on 27 December 2008

Type-B monogalactosyldiacylglycerol synthases are involved in phosphate starvation-induced lipid remodeling, and are crucial for low-phosphate adaptation.

scientific article published on 20 September 2008

Whole-Genome Sequence of the Purple Photosynthetic Bacterium Rhodovulum sulfidophilum Strain W4.

scientific article published on 8 August 2013

cDNA cloning of rice lipoxygenase L-2 and characterization using an active enzyme expressed from the cDNA in Escherichia coli

scientific article

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