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List of works by Oliver Hofmann

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Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis

scientific article
A promoter-level mammalian expression atlas

scientific article
Genomic analyses identify molecular subtypes of pancreatic cancer

scientific article published on 24 February 2016
miR-24 Inhibits cell proliferation by targeting E2F2, MYC, and other cell-cycle genes via binding to "seedless" 3'UTR microRNA recognition elements

scientific article
An atlas of combinatorial transcriptional regulation in mouse and man

scientific article
Aberrant lipid metabolism disrupts calcium homeostasis causing liver endoplasmic reticulum stress in obesity

scientific article
Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls

scientific article
Toward interoperable bioscience data

scientific article (publication date: 27 January 2012)
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.

scientific article
Clonal dynamics of native haematopoiesis

scientific article published on 5 October 2014
Novel loci for adiponectin levels and their influence on type 2 diabetes and metabolic traits: a multi-ethnic meta-analysis of 45,891 individuals

scientific article
Genome-wide analysis of cancer/testis gene expression

scientific article
VarDict: a novel and versatile variant caller for next-generation sequencing in cancer research

scientific article published on 7 April 2016
ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level

scientific article (publication date: 15 September 2010)
Capture of microRNA-bound mRNAs identifies the tumor suppressor miR-34a as a regulator of growth factor signaling

scientific article
A genome-wide association search for type 2 diabetes genes in African Americans

scientific article published on 4 January 2012
Human Proteinpedia enables sharing of human protein data

scientific article
ASTD: The Alternative Splicing and Transcript Diversity database

scientific article
Mice and men: their promoter properties

scientific article published on 28 April 2006
BRENDA: a resource for enzyme data and metabolic information

scientific article
Cell-specific translational profiling in acute kidney injury

scientific article published on 24 February 2014
A functional genomic screen reveals novel host genes that mediate interferon-alpha's effects against hepatitis C virus

scientific article
Hypermutation In Pancreatic Cancer

scientific article
A network of epigenetic regulators guides developmental haematopoiesis in vivo

scientific article
Sequencing of captive target transcripts identifies the network of regulated genes and functions of primate-specific miR-522.

scientific article published on 14 August 2014
Stem cell-like gene expression in ovarian cancer predicts type II subtype and prognosis

scientific article
Computational selection and prioritization of candidate genes for fetal alcohol syndrome

scientific article
The LIFEdb database in 2006

scientific article
Prenatal lead levels, plasma amyloid β levels, and gene expression in young adulthood

scientific article
Chronic endotoxin exposure produces airflow obstruction and lung dendritic cell expansion

journal article published in 2012
The Stem Cell Discovery Engine: an integrated repository and analysis system for cancer stem cell comparisons

scientific article published on 24 November 2011
A quick guide to large-scale genomic data mining

scientific article
Comparison of illumina and 454 deep sequencing in participants failing raltegravir-based antiretroviral therapy

scientific article
Silencing of the Drosophila ortholog of SOX5 leads to abnormal neuronal development and behavioral impairment

scientific article published on 10 February 2017
Simplified ontologies allowing comparison of developmental mammalian gene expression

scientific article
An in-depth comparison of the male pediatric and adult urinary proteomes

scientific article published on 22 May 2013
An RNA-binding Protein, Lin28, Recognizes and Remodels G-quartets in the MicroRNAs (miRNAs) and mRNAs It Regulates

scientific journal article
Pathprinting: An integrative approach to understand the functional basis of disease

scientific article published on 26 July 2013
Concept-based annotation of enzyme classes

scientific article published on 20 January 2005
A comprehensive promoter landscape identifies a novel promoter for CD133 in restricted tissues, cancers, and stem cells.

scientific article published on 29 October 2013
Mycoplasma Infection Alters Cancer Stem Cell Properties in Vitro

scientific article published on 30 October 2015
Live coverage of scientific conferences using web technologies

scientific article
Population differences in transcript-regulator expression quantitative trait loci

scientific article (publication date: 2012)
Iterative sorting reveals CD133+ and CD133- melanoma cells as phenotypically distinct populations.

scientific article
CAGExploreR: an R package for the analysis and visualization of promoter dynamics across multiple experiments.

scientific article
Prioritizing genes of potential relevance to diseases affected by sex hormones: an example of myasthenia gravis

scientific article
The Stem Cell Commons: an exemplar for data integration in the biomedical domain driven by the ISA framework

scientific article
Live Coverage of Intelligent Systems for Molecular Biology/European Conference on computational biology (ISMB/ECCB) 2009

scientific article
Prioritisation of structural variant calls in cancer genomes

scientific article
Deep targeted sequencing of 12 breast cancer susceptibility regions in 4611 women across four different ethnicities

scientific article

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