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List of works by Ramón Díaz-Uriarte

A predictor based on the somatic genomic changes of the BRCA1/BRCA2 breast cancer tumors identifies the non-BRCA1/BRCA2 tumors with BRCA1 promoter hypermethylation

article

ADaCGH2: parallelized analysis of (big) CNA data.

scientific article

ADaCGH: A parallelized web-based application and R package for the analysis of aCGH data

scientific article

An approach to inferring transcriptional regulation among genes from large-scale expression data.

scientific article

An epistatic interaction between the PAX8 and STK17B genes in papillary thyroid cancer susceptibility.

scientific article

An optimized predictor panel for colorectal cancer diagnosis based on the combination of tumor-associated antigens obtained from protein and phage microarrays

scientific article

Asterias: a parallelized web-based suite for the analysis of expression and aCGH data

scientific article (publication date: 3 February 2007)

CNVassoc: Association analysis of CNV data using R ⬇️

scientific article published on May 24, 2011

Cancer Progression Models and Fitness Landscapes: a Many-to-Many Relationship

scientific article published on 18 October 2017

Conditional prediction of consecutive tumor evolution using cancer progression models: What genotype comes next?

scientific article published on 21 December 2021

DNMAD: web-based diagnosis and normalization for microarray data

scientific article published on 9 July 2004

Detection of recurrent copy number alterations in the genome: taking among-subject heterogeneity seriously

scientific article published on 23 September 2009

Differential gene expression profile in endometrioid and nonendometrioid endometrial carcinoma: STK15 is frequently overexpressed and amplified in nonendometrioid carcinomas.

scientific article published in September 2003

Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information

scientific article

E2F2 represses cell cycle regulators to maintain quiescence.

scientific article

Effects of branch length errors on the performance of phylogenetically independent contrasts

scientific article published on 01 December 1998

Every which way? On predicting tumor evolution using cancer progression models

scientific article published on 02 August 2019

Flexible and accurate detection of genomic copy-number changes from aCGH.

scientific article

GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data

scientific article

GEPAS: A web-based resource for microarray gene expression data analysis

scientific article

Gene expression analysis of chromosomal regions with gain or loss of genetic material detected by comparative genomic hybridization

article

Gene expression data preprocessing.

scientific article

Gene selection and classification of microarray data using random forest.

scientific article

GeneSrF and varSelRF: a web-based tool and R package for gene selection and classification using random forest

scientific article

Genome wide association study identifies a novel putative mammographic density locus at 1q12-q21.

scientific article

Genomic Profiling of Circulating Plasma RNA for the Analysis of Cancer

article

IDconverter and IDClight: conversion and annotation of gene and protein IDs.

scientific article

Identification of MST1/STK4 and SULF1 proteins as autoantibody targets for the diagnosis of colorectal cancer by using phage microarrays.

scientific article

Identification of tumor-associated autoantigens for the diagnosis of colorectal cancer in serum using high density protein microarrays.

scientific article published on 28 July 2009

Identifying restrictions in the order of accumulation of mutations during tumor progression: effects of passengers, evolutionary models, and sampling

scientific article published on 12 February 2015

Levels of active tyrosine kinase receptor determine the tumor response to Zalypsis

scientific article

Levels of p27(kip1) determine Aplidin sensitivity

scientific article published on April 2007

Mecp2-null mice provide new neuronal targets for Rett syndrome.

scientific article

Pomelo II: finding differentially expressed genes.

scientific article published on 12 May 2009

Ten quick tips for biomarker discovery and validation analyses using machine learning

scientific article published on 11 August 2022

Territorial intrusion risk and antipredator behaviour: a mathematical model

scientific article published in June 2001

Transcription initiation activity sets replication origin efficiency in mammalian cells

scientific article (publication date: April 2009)

miRNA expression in diffuse large B-cell lymphoma treated with chemoimmunotherapy

scientific article published in June 2011

waviCGH: a web application for the analysis and visualization of genomic copy number alterations

scientific article

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