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List of works by John P. Ryan

A coastal ocean extreme bloom incubator

scholarly article

A comparison of global estimates of marine primary production from ocean color

article

A peak-capture algorithm used on an autonomous underwater vehicle in the 2010 Gulf of Mexico oil spill response scientific survey

A system of coordinated autonomous robots for Lagrangian studies of microbes in the oceanic deep chlorophyll maximum

scientific article

Acoustic signature reveals blue whales tune life‐history transitions to oceanographic conditions

scientific article published on 14 February 2022

Acoustic vector sensor analysis of the Monterey Bay region soundscape and the impact of COVID-19

scientific article published in April 2022

Animal-Borne Metrics Enable Acoustic Detection of Blue Whale Migration

scientific article published on 26 September 2020

Application of the Hyperspectral Imager for the Coastal Ocean to Phytoplankton Ecology Studies in Monterey Bay, CA, USA

scholarly article by John Ryan et al published 27 January 2014 in Remote Sensing

Association of whale sharks (Rhincodon typus) with thermo-biological frontal systems of the eastern tropical Pacific

scientific article published on 30 August 2017

Atmospheric correction for MASTER image data using localized modelled and observed meteorology and trace gases

scholarly article by Daniel S. Tkacik published in May 2012

Autonomous Four-Dimensional Mapping and Tracking of a Coastal Upwelling Front by an Autonomous Underwater Vehicle

Autonomous detection and sampling of water types and fronts in a coastal upwelling system by an autonomous underwater vehicle

scientific article published in 2012

Autonomous front tracking by a Wave Glider

Characterizing estuarine plume discharge into the coastal ocean using fatty acid biomarkers and pigment analysis

scientific article

Coastal Ocean Physics and Red Tides: An Example from Monterey Bay, California

article by John Ryan et al published 1 June 2005 in Oceanography

Coordinated sampling of dynamic oceanographic features with underwater vehicles and drifters

Correction: Ryan, J., et al. Application of the Hyperspectral Imager for the Coastal Ocean to Phytoplankton Ecology Studies in Monterey Bay, CA, USA. Remote Sens. 2014, 6, 1007–1025

scholarly article by Marcos Montes et al published 12 October 2015 in Remote Sensing

Data-driven robotic sampling for marine ecosystem monitoring

Design and Tests of an Adaptive Triggering Method for Capturing Peak Samples in a Thin Phytoplankton Layer by an Autonomous Underwater Vehicle

scholarly article by Yanwu Zhang et al published October 2010 in IEEE Journal of Oceanic Engineering

Development of an Active, Large Volume, Discrete Seawater Sampler for Autonomous Underwater Vehicles

article

Ecogenomic sensor reveals controls on N2-fixing microorganisms in the North Pacific Ocean

scientific article

Ecology of the Ocean Sunfish, Mola mola, in the southern California Current System

scientific article published in 2015

Enhanced chlorophyll associated with tropical instability waves in the equatorial Pacific

article

Evolution of a physical and biological front from upwelling to relaxation

Finding and Tracking a Phytoplankton Patch by a Long-Range Autonomous Underwater Vehicle

scientific article published in April 2022

Fine scale mapping of the structure and composition of the Elkhorn Slough (California, USA) tidal plume

article

Forage Species Swarm in Response to Coastal Upwelling

scientific article published on 4 February 2019

From anchovies to sardines and back: multidecadal change in the Pacific Ocean

scientific article (publication date: 10 January 2003)

Humpback whale song occurrence reflects ecosystem variability in feeding and migratory habitat of the northeast Pacific

scientific article published on 16 September 2019

Influence of atmospheric nutrients on primary productivity in a coastal upwelling region

scholarly article

Influences of upwelling and downwelling winds on red tide bloom dynamics in Monterey Bay, California

article by John P. Ryan et al published March 2009 in Continental Shelf Research

Interacting physical, chemical and biological forcing of phytoplankton thin-layer variability in Monterey Bay, California

scholarly article by John P. Ryan et al published January 2010 in Continental Shelf Research

Iron, nutrient and phytoplankton biomass relationships in upwelled waters of the California coastal system

scholarly article by Steve E. Fitzwater et al published October 2003 in Continental Shelf Research

Isotherm Tracking by an Autonomous Underwater Vehicle in Drift Mode

Layered organization in the coastal ocean: An introduction to planktonic thin layers and the LOCO project

scholarly article by James M. Sullivan published in January 2010

Linking the physiology and ecology of Cochlodinium to better understand harmful algal bloom events: A comparative approach

Mass stranding of marine birds caused by a surfactant-producing red tide

scientific article published in 2009

Metatranscriptomic analysis of autonomously collected and preserved marine bacterioplankton

scientific article

Nutrient Loading through Submarine Groundwater Discharge and Phytoplankton Growth in Monterey Bay, CA.

scientific article published on 19 May 2015

Oceanic and atmospheric anomalies of tropical instability waves

scholarly article

Oceanic giants dance to atmospheric rhythms: Ephemeral wind-driven resource tracking by blue whales

scientific article published in November 2022

Parasitism as a biological control agent of dinoflagellate blooms in the California Current System

Pattern and synchrony of gene expression among sympatric marine microbial populations.

scientific article

Phosphorus cycling in the red tide incubator region of monterey bay in response to upwelling

scientific article published on 7 February 2012

Preliminary Results for Model-Based Adaptive Control of an Autonomous Underwater Vehicle

Response of phytoplankton and bacterial biomass during a wastewater effluent diversion into nearshore coastal waters

scholarly article by David A. Caron et al published February 2017 in Estuarine, Coastal and Shelf Science

Robotic sampling, in situ monitoring and molecular detection of marine zooplankton

scientific article published in 2012

Simultaneous Tracking and Sampling of Dynamic Oceanographic Features with Autonomous Underwater Vehicles and Lagrangian Drifters

Single-taxon field measurements of bacterial gene regulation controlling DMSP fate.

scientific article published on 20 February 2015

Social exploitation of extensive, ephemeral, environmentally controlled prey patches by supergroups of rorqual whales

scientific article published in December 2021

Total and monomethyl mercury in fog water from the central California coast

scholarly article

Tracking a Marine Ecotourism Star: Movements of the Short Ocean SunfishMola ramsayiin Nusa Penida, Bali, Indonesia

scholarly article by Tierney Thys et al published 2016 in Journal of marine biology

Understanding harmful algae in stratified systems: Review of progress and future directions

article

Underwater application of quantitative PCR on an ocean mooring

scientific article

Unprecedented DMSP Concentrations in a Massive Dinoflagellate Bloom in Monterey Bay, CA

scientific article published on 14 November 2019

Unusual large-scale phytoplankton blooms in the equatorial Pacific

scholarly article by John P Ryan et al published November 2002 in Progress in Oceanography

Western Pacific modulation of large phytoplankton blooms in the central and eastern equatorial Pacific

scholarly article

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