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List of works by Joy D Van Nostrand

A Slow-Release Substrate Stimulates Groundwater Microbial Communities for Long-Term in Situ Cr(VI) Reduction.

scientific article published on 2 April 2015

A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom

scientific article published on 05 October 2016

Annual Removal of Aboveground Plant Biomass Alters Soil Microbial Responses to Warming

scientific article

Applications of functional gene microarrays for profiling microbial communities

scientific article published on 04 January 2012

Assessing the microbial community and functional genes in a vertical soil profile with long-term arsenic contamination

scientific article

Author Correction: Continental scale structuring of forest and soil diversity via functional traits

scientific article published on 01 November 2019

Author Correction: Global diversity and biogeography of bacterial communities in wastewater treatment plants

scientific article published on 01 December 2019

Biogeographic patterns of soil diazotrophic communities across six forests in the North America.

scientific article

Black truffle-associated bacterial communities during the development and maturation of Tuber melanosporum ascocarps and putative functional roles.

scientific article

Cas9-based tools for targeted genome editing and transcriptional control.

scientific article published on 03 January 2014

Climate warming accelerates temporal scaling of grassland soil microbial biodiversity

scientific article published on 25 March 2019

Comparative metagenomics reveals impact of contaminants on groundwater microbiomes

scientific article published on 31 October 2015

Continental scale structuring of forest and soil diversity via functional traits

scientific article published on 19 August 2019

Correction to GeoChip-Based Analysis of Microbial Functional Gene Diversity in a Landfill Leachate-Contaminated Aquifer

scientific article published on 5 February 2013

Correlation of genomic and physiological traits of thermoanaerobacter species with biofuel yields

scientific article (publication date: November 2011)

Correspondence: Reply to 'Analytical flaws in a continental-scale forest soil microbial diversity study'

scientific article

Deep-sea oil plume enriches indigenous oil-degrading bacteria

scientific article

Design and analysis of mismatch probes for long oligonucleotide microarrays

scientific article

Development and applications of functional gene microarrays in the analysis of the functional diversity, composition, and structure of microbial communities

article

Development of HuMiChip for functional profiling of human microbiomes

scientific article

Distinct responses of soil microbial communities to elevated CO2 and O3 in a soybean agro-ecosystem

scientific article (publication date: March 2014)

Divergent taxonomic and functional responses of microbial communities to field simulation of aeolian soil erosion and deposition.

scientific article

Dramatic Increases of Soil Microbial Functional Gene Diversity at the Treeline Ecotone of Changbai Mountain

scientific article

Dynamic Succession of Groundwater Functional Microbial Communities in Response to Emulsified Vegetable Oil Amendment during Sustained In Situ U(VI) Reduction.

scientific article published on 10 April 2015

Dynamic Succession of Groundwater Sulfate-Reducing Communities during Prolonged Reduction of Uranium in a Contaminated Aquifer.

scientific article

Dynamics of Microbial Community Composition and Function duringIn SituBioremediation of a Uranium-Contaminated Aquifer

article

Dynamics of microbial community composition and function during in situ bioremediation of a uranium-contaminated aquifer

scientific article

Effects of nitrate on the stability of uranium in a bioreduced region of the subsurface

scientific article

Efficient Genome Editing in Clostridium cellulolyticum via CRISPR-Cas9 Nickase

scientific article published on 24 April 2015

Elevated CO2 shifts the functional structure and metabolic potentials of soil microbial communities in a C4 agroecosystem.

scientific article

Elevated CO₂ influences microbial carbon and nitrogen cycling

scientific article (publication date: 29 May 2013)

Elevated carbon dioxide alters the structure of soil microbial communities

scientific article

Experimental evolution reveals nitrate tolerance mechanisms in Desulfovibrio vulgaris

scientific article published on 15 September 2020

Field and laboratory studies on the bioconversion of coal to methane in the San Juan Basin

scientific article published on 11 January 2012

First investigation of the microbiology of the deepest layer of ocean crust

scientific article published in 2010

From lithotroph- to organotroph-dominant: directional shift of microbial community in sulphidic tailings during phytostabilization

scientific article published on 13 August 2015

Functional Gene Array-Based Analysis of Microbial Community Structure in Groundwaters with a Gradient of Contaminant Levels

article

Functional Gene Array-Based Ultrasensitive and Quantitative Detection of Microbial Populations in Complex Communities.

scientific article published on 18 June 2019

Functional activity and functional gene diversity of a Cu-contaminated soil remediated by aided phytostabilization using compost, dolomitic limestone and a mixed tree stand

article

Functional biogeography as evidence of gene transfer in hypersaline microbial communities

scientific article

Functional ecology of an Antarctic Dry Valley

scientific article (publication date: 28 May 2013)

Functional gene array-based analysis of microbial communities in heavy metals-contaminated lake sediments

article

Functional gene arrays-based analysis of fecal microbiomes in patients with liver cirrhosis.

scientific article

Functional gene differences in soil microbial communities from conventional, low-input, and organic farmlands

scientific article

Functional gene diversity of oolitic sands from Great Bahama Bank.

scientific article

Functional gene diversity of soil microbial communities from five oil-contaminated fields in China.

scientific article

Gene-informed decomposition model predicts lower soil carbon loss due to persistent microbial adaptation to warming

scientific article published on 29 September 2020

GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity

scientific article

GeoChip 3.0: A High Throughput Tool for Analyzing Microbial Community, Composition, Structure, and Functional Activity

article

GeoChip 4: a functional gene-array-based high-throughput environmental technology for microbial community analysis

scientific article

GeoChip profiling of microbial community in response to global changes simulated by soil transplant and cropping.

scientific article

GeoChip-Based Analysis of Microbial Functional Gene Diversity in a Landfill Leachate-Contaminated Aquifer

scientific article published on 23 May 2012

GeoChip-based analysis of functional microbial communities during the reoxidation of a bioreduced uranium-contaminated aquifer

scientific article published on 14 July 2009

GeoChip-based analysis of metabolic diversity of microbial communities at the Juan de Fuca Ridge hydrothermal vent

scientific article

GeoChip-based analysis of the functional gene diversity and metabolic potential of microbial communities in acid mine drainage.

scientific article

GeoChip-based analysis of the functional gene diversity and metabolic potential of soil microbial communities of mangroves

scientific article published on 8 November 2012

Geochip-based functional gene analysis of anodophilic communities in microbial electrolysis cells under different operational modes

scientific article

Global diversity and biogeography of bacterial communities in wastewater treatment plants

scientific article published on 13 May 2019

Hexavalent chromium reduction under fermentative conditions with lactate stimulated native microbial communities

scientific article

High spatiotemporal variability of bacterial diversity over short time scales with unique hydrochemical associations within a shallow aquifer

scientific article published on 26 July 2019

How sulphate-reducing microorganisms cope with stress: lessons from systems biology

scientific article

Huanglongbing alters the structure and functional diversity of microbial communities associated with citrus rhizosphere.

scientific article

Illumina sequencing-based analysis of free-living bacterial community dynamics during an Akashiwo sanguine bloom in Xiamen sea, China.

scientific article

Impacts of the Three Gorges Dam on microbial structure and potential function

scientific article

In situ bioreduction of uranium (VI) to submicromolar levels and reoxidation by dissolved oxygen

scientific article published in August 2007

Integrated metagenomics and network analysis of soil microbial community of the forest timberline.

scientific article

Isolation and characterization of four gram-positive nickel-tolerant microorganisms from contaminated sediments

scientific article published on 03 April 2007

Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community

scientific article

Long-Term Warming in Alaska Enlarges the Diazotrophic Community in Deep Soils

article

Long-term cultivation of a stable Methylocystis-dominated methanotrophic enrichment enabling tailored production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate).

scientific article published on 3 October 2015

Management with willow short rotation coppice increase the functional gene diversity and functional activity of a heavy metal polluted soil.

scientific article

Mechanisms of pollution induced community tolerance in a soil microbial community exposed to Cu.

scientific article published on 29 March 2014

Metagenomic analysis reveals a marked divergence in the structure of belowground microbial communities at elevated CO2.

scientific article published on 23 March 2010

Microarray-based analysis of microbial functional diversity along an oil contamination gradient in oil field

scientific article published on 28 August 2009

Microbial Community Dynamics and Activity Link to Indigo Production from Indole in Bioaugmented Activated Sludge Systems

scientific article published on 15 September 2015

Microbial Functional Gene Diversity Predicts Groundwater Contamination and Ecosystem Functioning.

scientific article published on 20 February 2018

Microbial Functional Responses Explain Alpine Soil Carbon Fluxes under Future Climate Scenarios

scientific article published in 2021

Microbial communities and functional genes associated with soil arsenic contamination and the rhizosphere of the arsenic-hyperaccumulating plant Pteris vittata L

scientific article

Microbial community analysis of a coastal salt marsh affected by the Deepwater Horizon oil spill

scientific article

Microbial community structure and function of nitrobenzene reduction biocathode in response to carbon source switchover

scientific article published on 5 February 2014

Microbial functional diversity covaries with permafrost thaw-induced environmental heterogeneity in tundra soil

scientific article

Microbial functional gene diversity with a shift of subsurface redox conditions during In Situ uranium reduction

scientific article

Microbial functional genes commonly respond to elevated carbon dioxide

scientific article published on 29 August 2020

Microbial functional structure of Montastraea faveolata, an important Caribbean reef-building coral, differs between healthy and yellow-band diseased colonies

scientific article published on 02 December 2009

Microbial functional traits are sensitive indicators of mild disturbance by lamb grazing

scientific article published on 30 January 2019

Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

scientific article

Ocean Acidification Regulates the Activity, Community Structure, and Functional Potential of Heterotrophic Bacterioplankton in an Oligotrophic Gyre

scientific article published in 2019

Over 150 years of long-term fertilization alters spatial scaling of microbial biodiversity

scientific article published on 7 April 2015

Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis.

scientific article published on 19 June 2015

Phylogenetic and functional diversity of microbial communities associated with subsurface sediments of the Sonora Margin, Guaymas Basin.

scientific article

Preliminary analysis of salivary microbiome and their potential roles in oral lichen planus

scientific article

Production of Nitrous Oxide from Nitrite in Stable Type II Methanotrophic Enrichments.

scientific article published on 24 August 2015

Prokaryotic diversity, distribution, and insights into their role in biogeochemical cycling in marine basalts

scientific article

Reduction of nickel and uranium toxicity and enhanced trichloroethylene degradation to Burkholderia vietnamiensis PR1301 with hydroxyapatite amendment

scientific article published in March 2007

Responses of microbial communities to single-walled carbon nanotubes in phenol wastewater treatment systems

scientific article published on 13 March 2015

Responses of microbial community functional structures to pilot-scale uranium in situ bioremediation

scientific article published on 18 March 2010

Responses of the functional structure of soil microbial community to livestock grazing in the Tibetan alpine grassland

scientific article published on 27 November 2012

Saliva microbiota carry caries-specific functional gene signatures

scientific article

Salivary mycobiome dysbiosis and its potential impact on bacteriome shifts and host immunity in oral lichen planus

scientific article published on 02 July 2019

Scale-dependent effects of climate and geographic distance on bacterial diversity patterns across northern China's grasslands.

scientific article published on 29 October 2015

Sequencing of multiple clostridial genomes related to biomass conversion and biofuel production

scientific article

Soil organic matter quantity and quality shape microbial community compositions of subtropical broadleaved forests.

scientific article published on 12 September 2015

Stochasticity, succession, and environmental perturbations in a fluidic ecosystem

scientific article

StressChip as a high-throughput tool for assessing microbial community responses to environmental stresses

scientific article

Taxonomic and Functional Responses of Soil Microbial Communities to Annual Removal of Aboveground Plant Biomass.

scientific article

Taxonomic and functional shifts in the beech rhizosphere microbiome across a natural soil toposequence

scientific article published on 29 August 2017

Temperature mediates continental-scale diversity of microbes in forest soils.

scientific article

The PathoChip, a functional gene array for assessing pathogenic properties of diverse microbial communities

scientific article published on 13 June 2013

The effects of silver nanoparticles on intact wastewater biofilms

scientific article published on 6 July 2015

The functional gene composition and metabolic potential of coral-associated microbial communities

scientific article

The interactive effects of soil transplant into colder regions and cropping on soil microbiology and biogeochemistry

scientific article

The polycyclic aromatic hydrocarbon degradation potential of Gulf of Mexico native coastal microbial communities after the Deepwater Horizon oil spill

scientific article

Use of functional gene arrays for elucidating in situ biodegradation.

scientific article

Warming Alters Expressions of Microbial Functional Genes Important to Ecosystem Functioning

scientific article

Warming enhances old organic carbon decomposition through altering functional microbial communities

scientific article

Warming-induced permafrost thaw exacerbates tundra soil carbon decomposition mediated by microbial community

scientific article published on 17 January 2020

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