List of works - Joy D. Van Nostrand

Deep-sea oil plume enriches indigenous oil-degrading bacteria

scientific article

Reproducibility and quantitation of amplicon sequencing-based detection

scientific article

Stochasticity, succession, and environmental perturbations in a fluidic ecosystem

scientific article

GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity

scientific article

Metagenomic analysis reveals a marked divergence in the structure of belowground microbial communities at elevated CO2.

scientific article published on 23 March 2010

Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

scientific article

Efficient Genome Editing in Clostridium cellulolyticum via CRISPR-Cas9 Nickase

scientific article published on 24 April 2015

Functional gene diversity of soil microbial communities from five oil-contaminated fields in China.

scientific article

Stochastic assembly leads to alternative communities with distinct functions in a bioreactor microbial community

scientific article

GeoChip-based analysis of metabolic diversity of microbial communities at the Juan de Fuca Ridge hydrothermal vent

scientific article

GeoChip 4: a functional gene-array-based high-throughput environmental technology for microbial community analysis

scientific article

Environmental filtering decreases with fish development for the assembly of gut microbiota

scientific article

Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis.

scientific article published on 19 June 2015

Microbial community analysis of a coastal salt marsh affected by the Deepwater Horizon oil spill

scientific article

Prokaryotic diversity, distribution, and insights into their role in biogeochemical cycling in marine basalts

scientific article

Temperature mediates continental-scale diversity of microbes in forest soils.

scientific article

Functional ecology of an Antarctic Dry Valley

scientific article (publication date: 28 May 2013)

How sulphate-reducing microorganisms cope with stress: lessons from systems biology

scientific article

Microbial functional structure of Montastraea faveolata, an important Caribbean reef-building coral, differs between healthy and yellow-band diseased colonies

scientific article published on 02 December 2009

First investigation of the microbiology of the deepest layer of ocean crust

scientific article published in 2010

In situ bioreduction of uranium (VI) to submicromolar levels and reoxidation by dissolved oxygen

scientific article published in August 2007

Responses of microbial community functional structures to pilot-scale uranium in situ bioremediation

scientific article published on 18 March 2010

Preliminary analysis of salivary microbiome and their potential roles in oral lichen planus

scientific article

Huanglongbing alters the structure and functional diversity of microbial communities associated with citrus rhizosphere.

scientific article

Sequencing of multiple clostridial genomes related to biomass conversion and biofuel production

scientific article

GeoChip-based analysis of functional microbial communities during the reoxidation of a bioreduced uranium-contaminated aquifer

scientific article published on 14 July 2009

Microbial communities and functional genes associated with soil arsenic contamination and the rhizosphere of the arsenic-hyperaccumulating plant Pteris vittata L

scientific article

Applications of functional gene microarrays for profiling microbial communities

scientific article published on 04 January 2012

Black truffle-associated bacterial communities during the development and maturation of Tuber melanosporum ascocarps and putative functional roles.

scientific article

Field and laboratory studies on the bioconversion of coal to methane in the San Juan Basin

scientific article published on 11 January 2012

GeoChip-based analysis of the functional gene diversity and metabolic potential of microbial communities in acid mine drainage.

scientific article

Functional Gene Array-Based Analysis of Microbial Community Structure in Groundwaters with a Gradient of Contaminant Levels

article

Illumina sequencing-based analysis of free-living bacterial community dynamics during an Akashiwo sanguine bloom in Xiamen sea, China.

scientific article

Microarray-based analysis of microbial functional diversity along an oil contamination gradient in oil field

scientific article published on 28 August 2009

Responses of the functional structure of soil microbial community to livestock grazing in the Tibetan alpine grassland

scientific article published on 27 November 2012

Functional biogeography as evidence of gene transfer in hypersaline microbial communities

scientific article

Impacts of the Three Gorges Dam on microbial structure and potential function

scientific article

Microbial community structure and function of nitrobenzene reduction biocathode in response to carbon source switchover

scientific article published on 5 February 2014

Cas9-based tools for targeted genome editing and transcriptional control.

scientific article published on 03 January 2014

Correlation of genomic and physiological traits of thermoanaerobacter species with biofuel yields

scientific article (publication date: November 2011)

Elevated carbon dioxide alters the structure of soil microbial communities

scientific article

GeoChip-based analysis of the functional gene diversity and metabolic potential of soil microbial communities of mangroves

scientific article published on 8 November 2012

Integrated metagenomics and network analysis of soil microbial community of the forest timberline.

scientific article

Comparative metagenomics reveals impact of contaminants on groundwater microbiomes

scientific article published on 31 October 2015

Effects of nitrate on the stability of uranium in a bioreduced region of the subsurface

scientific article

Microbial functional gene diversity with a shift of subsurface redox conditions during In Situ uranium reduction

scientific article

Dynamics of microbial community composition and function during in situ bioremediation of a uranium-contaminated aquifer

scientific article

Scale-dependent effects of climate and geographic distance on bacterial diversity patterns across northern China's grasslands.

scientific article published on 29 October 2015

The interactive effects of soil transplant into colder regions and cropping on soil microbiology and biogeochemistry

scientific article

Global diversity and biogeography of bacterial communities in wastewater treatment plants

scientific article published on 13 May 2019

List of works by Joy D. Van Nostrand

Deep-sea oil plume enriches indigenous oil-degrading bacteria

Reproducibility and quantitation of amplicon sequencing-based detection

Stochasticity, succession, and environmental perturbations in a fluidic ecosystem

GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity

Metagenomic analysis reveals a marked divergence in the structure of belowground microbial communities at elevated CO2.

Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

Efficient Genome Editing in Clostridium cellulolyticum via CRISPR-Cas9 Nickase

Functional gene diversity of soil microbial communities from five oil-contaminated fields in China.

Stochastic assembly leads to alternative communities with distinct functions in a bioreactor microbial community

GeoChip-based analysis of metabolic diversity of microbial communities at the Juan de Fuca Ridge hydrothermal vent

GeoChip 4: a functional gene-array-based high-throughput environmental technology for microbial community analysis

Environmental filtering decreases with fish development for the assembly of gut microbiota

Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis.

Microbial community analysis of a coastal salt marsh affected by the Deepwater Horizon oil spill

Prokaryotic diversity, distribution, and insights into their role in biogeochemical cycling in marine basalts

Temperature mediates continental-scale diversity of microbes in forest soils.

Functional ecology of an Antarctic Dry Valley

How sulphate-reducing microorganisms cope with stress: lessons from systems biology

Microbial functional structure of Montastraea faveolata, an important Caribbean reef-building coral, differs between healthy and yellow-band diseased colonies

First investigation of the microbiology of the deepest layer of ocean crust

In situ bioreduction of uranium (VI) to submicromolar levels and reoxidation by dissolved oxygen

Responses of microbial community functional structures to pilot-scale uranium in situ bioremediation

Preliminary analysis of salivary microbiome and their potential roles in oral lichen planus

Huanglongbing alters the structure and functional diversity of microbial communities associated with citrus rhizosphere.

Sequencing of multiple clostridial genomes related to biomass conversion and biofuel production

GeoChip-based analysis of functional microbial communities during the reoxidation of a bioreduced uranium-contaminated aquifer

Microbial communities and functional genes associated with soil arsenic contamination and the rhizosphere of the arsenic-hyperaccumulating plant Pteris vittata L

Applications of functional gene microarrays for profiling microbial communities

Black truffle-associated bacterial communities during the development and maturation of Tuber melanosporum ascocarps and putative functional roles.

Field and laboratory studies on the bioconversion of coal to methane in the San Juan Basin

GeoChip-based analysis of the functional gene diversity and metabolic potential of microbial communities in acid mine drainage.

Functional Gene Array-Based Analysis of Microbial Community Structure in Groundwaters with a Gradient of Contaminant Levels

Illumina sequencing-based analysis of free-living bacterial community dynamics during an Akashiwo sanguine bloom in Xiamen sea, China.

Microarray-based analysis of microbial functional diversity along an oil contamination gradient in oil field

Responses of the functional structure of soil microbial community to livestock grazing in the Tibetan alpine grassland

Functional biogeography as evidence of gene transfer in hypersaline microbial communities

Impacts of the Three Gorges Dam on microbial structure and potential function

Microbial community structure and function of nitrobenzene reduction biocathode in response to carbon source switchover

Cas9-based tools for targeted genome editing and transcriptional control.

Correlation of genomic and physiological traits of thermoanaerobacter species with biofuel yields

Elevated carbon dioxide alters the structure of soil microbial communities

GeoChip-based analysis of the functional gene diversity and metabolic potential of soil microbial communities of mangroves

Integrated metagenomics and network analysis of soil microbial community of the forest timberline.

Comparative metagenomics reveals impact of contaminants on groundwater microbiomes

Effects of nitrate on the stability of uranium in a bioreduced region of the subsurface

Microbial functional gene diversity with a shift of subsurface redox conditions during In Situ uranium reduction

Dynamics of microbial community composition and function during in situ bioremediation of a uranium-contaminated aquifer

Scale-dependent effects of climate and geographic distance on bacterial diversity patterns across northern China's grasslands.

The interactive effects of soil transplant into colder regions and cropping on soil microbiology and biogeochemistry

Global diversity and biogeography of bacterial communities in wastewater treatment plants