Search filters

List of works by Matthias Futschik

A novel phosphatidylinositol 3-kinase (PI3K) inhibitor directs a potent FOXO-dependent, p53-independent cell cycle arrest phenotype characterized by the differential induction of a subset of FOXO-regulated genes

scientific article

Acclimation of Oxygenic Photosynthesis to Iron Starvation Is Controlled by the sRNA IsaR1.

scientific article

Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysis

scientific article published on 29 February 2008

Association of CDH1 haplotypes with susceptibility to sporadic diffuse gastric cancer

scientific article published in November 2002

ChIP-seq Experiment and Data Analysis in the Cyanobacterium <i>Synechocystis</i> sp. PCC 6803

publication published on 20 June 2018

Choreography of the transcriptome, photophysiology, and cell cycle of a minimal photoautotroph, prochlorococcus

scientific article

Comparison and consolidation of microarray data sets of human tissue expression

scientific article

Comparison of human protein-protein interaction maps.

scientific article

Correction: The Challenge of Regulation in a Minimal Photoautotroph: Non-Coding RNAs in Prochlorococcus

scientific article published on 8 November 2008

CyanoEXpress: A web database for exploration and visualisation of the integrated transcriptome of cyanobacterium Synechocystis sp. PCC6803.

scientific article published on 6 July 2012

DNA motifs and sequence periodicities.

scientific article published in January 2006

Depletion of the FtsH1/3 Proteolytic Complex Suppresses the Nutrient Stress Response in the Cyanobacterium Synechocystis sp strain PCC 6803

scientific article published on 15 October 2019

Differentially expressed microRNAs in maternal plasma for the noninvasive prenatal diagnosis of Down syndrome (trisomy 21).

scientific article

Dynamic circadian protein-protein interaction networks predict temporal organization of cellular functions

scientific article

Evolving connectionist systems for knowledge discovery from gene expression data of cancer tissue

scientific article

Exogenous WNT5A and WNT11 proteins rescue CITED2 dysfunction in mouse embryonic stem cells and zebrafish morphants

scientific article published on 05 August 2019

Extracellular Proteins: Novel Key Components of Metal Resistance in Cyanobacteria?

scientific article published on 07 June 2016

FoxN1-dependent thymic epithelial cells promote T-cell leukemia development

scientific article published on 01 December 2018

Genome-wide analysis of light sensing in Prochlorococcus

scientific article published on 15 September 2006

Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution

scientific article

Glycerol positive promoters for tailored metabolic engineering of the yeast Saccharomyces cerevisiae

scientific article published on 01 May 2018

Graph-theoretical comparison reveals structural divergence of human protein interaction networks

scientific article published on 01 January 2007

HDNetDB: A Molecular Interaction Database for Network-Oriented Investigations into Huntington's Disease.

scientific article published on 12 July 2017

Huntington's disease and its therapeutic target genes: a global functional profile based on the HD Research Crossroads database

scientific article

Identification of Sc-type ILV6 as a target to reduce diacetyl formation in lager brewers' yeast

scientific article published on 3 August 2011

Identification of novel biomarkers in chronic immune thrombocytopenia (ITP) by microarray-based serum protein profiling

scientific article

Identification of the direct regulon of NtcA during early acclimation to nitrogen starvation in the cyanobacterium Synechocystis sp. PCC 6803.

scientific article published on 3 October 2017

Inferring modules from human protein interactome classes

scientific article

Integration and Comparison of Transcriptomic and Proteomic Data for Meningioma

scientific article published on 05 November 2020

Interleukin 32 promotes hematopoietic progenitor expansion and attenuates bone marrow cytotoxicity

scientific article published on 13 May 2011

Iron deprivation in Synechocystis: inference of pathways, non-coding RNAs, and regulatory elements from comprehensive expression profiling

scientific article published on December 2012

Membrane-enriched proteome changes and prion protein expression during neural differentiation and in neuroblastoma cells.

scientific article

Model selection and efficiency testing for normalization of cDNA microarray data

scientific article

Noise-robust soft clustering of gene expression time-course data

scientific article

Novel Human Embryonic Stem Cell Regulators Identified by Conserved and Distinct CpG Island Methylation State

scientific article published on 7 July 2015

OLIN: optimized normalization, visualization and quality testing of two-channel microarray data

scientific article

Parallel Genome-wide Profiling of Coding and Non-coding RNAs to Identify Novel Regulatory Elements in Embryonic and Maturated Heart.

scientific article

Prediction of clinical behaviour and treatment for cancers.

scientific article published in January 2003

Proteomic analysis discovers the differential expression of novel proteins and phosphoproteins in meningioma including NEK9, HK2 and SET and deregulation of RNA metabolism

scientific article published on 26 December 2018

Short RNA half-lives in the slow-growing marine cyanobacterium Prochlorococcus.

scientific article published on 19 May 2010

StemCellNet: an interactive platform for network-oriented investigations in stem cell biology.

scientific article published on 22 May 2014

StemChecker: a web-based tool to discover and explore stemness signatures in gene sets.

scientific article

StemMapper: a curated gene expression database for stem cell lineage analysis.

scientific article published on 17 October 2017

Systematic functional assessment of human protein-protein interaction maps.

scientific article published on January 2006

Systematic interaction network filtering identifies CRMP1 as a novel suppressor of huntingtin misfolding and neurotoxicity

scientific article published on May 2015

TRIB2 as a biomarker for diagnosis and progression of melanoma.

scientific article published on 13 January 2015

Targeting molecular networks for drug research

scientific article

The Transcriptional Landscape of the Photosynthetic Model Cyanobacterium Synechocystis sp. PCC6803.

scientific article published on 29 February 2016

The challenge of regulation in a minimal photoautotroph: non-coding RNAs in Prochlorococcus

scientific article

The integration and annotation of the human interactome in the UniHI Database

scientific article published in January 2012

The unfolded protein response and its potential role in Huntington's disease elucidated by a systems biology approach.

scientific article published on May 2015

Tight regulation of unstructured proteins: from transcript synthesis to protein degradation

scientific article

Toward a systems-level understanding of gene regulatory, protein interaction, and metabolic networks in cyanobacteria

scientific article

Transcriptional profiling of the hematopoietic support of interleukin-stimulated human umbilical vein endothelial cells (HUVECs).

scientific article published on 7 June 2011

Transcriptome dynamics of a broad host-range cyanophage and its hosts.

scientific article

UniHI 4: new tools for query, analysis and visualization of the human protein-protein interactome

scientific article published on 4 November 2008

UniHI 7: an enhanced database for retrieval and interactive analysis of human molecular interaction networks

scientific article

UniHI: an entry gate to the human protein interactome

scientific article

Paulina is supported by:

About Paulina

Help