List of works - John-Sebastian Eden

A Divergent Articulavirus in an Australian Gecko Identified Using Meta-Transcriptomics and Protein Structure Comparisons

scientific article published on 04 June 2020

A Divergent Hepatitis D-Like Agent in Birds

scientific article published on 17 December 2018

A Multi-Site Study of Norovirus Molecular Epidemiology in Australia and New Zealand, 2013-2014.

scientific article

A Survey of a Mixed Species Aviary Provides New Insights into the Pathogenicity, Diversity, Evolution, Host Range, and Distribution of Psittacine and Passerine Adenoviruses

scientific article published on 19 July 2019

A complex mosaic of enteroviruses shapes community-acquired hand, foot and mouth disease transmission and evolution within a single hospital

article

A divergent hepatitis D-like agent in birds

scientific article published on 23 September 2018

A fluorescence-based high-throughput screen to identify small compound inhibitors of the genotype 3a hepatitis C virus RNA polymerase

scientific article published on 24 May 2013

Adaptive evolution of bat dipeptidyl peptidase 4 (dpp4): implications for the origin and emergence of Middle East respiratory syndrome coronavirus

scientific article published in 2013

Amplification of Near Full-length HIV-1 Proviruses for Next-Generation Sequencing

article

An emergent clade of SARS-CoV-2 linked to returned travellers from Iran

scientific article (preprint)

Author Correction: The evolutionary history of vertebrate RNA viruses

scientific article published in Nature

Benign Rabbit Caliciviruses Exhibit Evolutionary Dynamics Similar to Those of Their Virulent Relatives

scientific article published on 10 August 2016

Comparative Phylodynamics of Rabbit Hemorrhagic Disease Virus in Australia and New Zealand

scientific article

Complete genome of the human norovirus GIV.1 strain Lake Macquarie virus

scientific article published on September 2012

Contribution of intra- and interhost dynamics to norovirus evolution

scientific article published on 28 December 2011

Cross-validation to select Bayesian hierarchical models in phylogenetics

scientific article published on 26 May 2016

Diversity and Evolution of Novel Invertebrate DNA Viruses Revealed by Meta-Transcriptomics

scientific article published on 25 November 2019

Emergence and Adaptation of a Novel Highly Pathogenic H7N9 Influenza Virus in Birds and Humans from a 2013 Human-Infecting Low-Pathogenic Ancestor

scientific article published on 25 October 2017

Emergent multisystemic Enterococcus infection threatens endangered Christmas Island reptile populations

scientific article published on 20 July 2017

Emerging recombinant noroviruses identified by clinical and waste water screening.

scientific article published on 29 March 2018

Evolution of Human Respiratory Syncytial Virus (RSV) over Multiple Seasons in New South Wales, Australia

article

Extensive Diversity of RNA Viruses in Australian Ticks

scientific article published on 7 August 2018

Extensive Diversity of RNA Viruses in Australian Ticks

scholarly article by Erin Harvey et al published 7 November 2018 in Journal of Virology

Francisella tularensis ssp. holarctica in Ringtail Possums, Australia

scientific article

Genetic diversity of SARS-CoV-2 and clinical, epidemiological characteristics of COVID-19 patients in Hanoi, Vietnam

scientific article published on 17 November 2020

Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in Australia.

scientific article

Hepatitis C Virus Genotype 8 Infection-Successful Treatment With Sofosbuvir/Velpatasvir

scientific article published on 01 July 2019

High levels of antibiotic resistance gene expression among birds living in a wastewater treatment plant

scholarly article published 5 November 2018

High-Resolution Metatranscriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western Australia

scientific article published on 21 June 2017

Identification of Genetically Intact HIV-1 Proviruses in Specific CD4+ T Cells from Effectively Treated Participants.

scientific article published in October 2017

Identification of diverse arthropod associated viruses in native Australian fleas

scientific article published on 09 July 2019

Interpret with caution: An evaluation of the commercial AusDiagnostics versus in-house developed assays for the detection of SARS-CoV-2 virus

scientific article published on 20 April 2020

Longitudinal Sequence and Functional Evolution within Glycoprotein E2 in Hepatitis C Virus Genotype 3a Infection

scientific article published on 13 May 2015

Meta-Transcriptomic Comparison of the RNA Viromes of the Mosquito Vectors Culex pipiens and Culex torrentium in Northern Europe

scientific article published on 06 November 2019

Meta-Transcriptomic Discovery of a Divergent Circovirus and a Chaphamaparvovirus in Captive Reptiles with Proliferative Respiratory Syndrome

scientific article published on 25 September 2020

Meta-Transcriptomic Identification of Divergent Amnoonviridae in Fish

scientific article published on 04 November 2020

Meta-transcriptomic analysis of virus diversity in urban wild birds with paretic disease

scientific article published on 24 June 2020

Meta-transcriptomics reveals a diverse antibiotic resistance gene pool in avian microbiomes

article

Metagenomic discovery and co-infection of diverse wobbly possum disease viruses and a novel hepacivirus in Australian brushtail possums

scientific article published on 01 January 2019

Metatranscriptomics as a tool to identify fungal species and subspecies in mixed communities

New insights into Sauropsid Papillomaviridae evolution and epizootiology: discovery of two novel papillomaviruses in native and invasive Island geckos ⬇️

scientific article published on 01 July 2019

No detectable effect of Mel on the prevalence and abundance of the RNA virome of

scientific article published on 25 July 2018

Nonnucleoside inhibitors of norovirus RNA polymerase: scaffolds for rational drug design

scientific article

Norovirus GII.4 variant 2006b caused epidemics of acute gastroenteritis in Australia during 2007 and 2008.

scientific article published in December 2010

Norovirus RNA-dependent RNA polymerase is phosphorylated by an important survival kinase, Akt

scientific article published on 17 August 2011

Novel hepaci- and pegi-like viruses in native Australian wildlife and non-human primates

scientific article published on 01 July 2020

Novel hepatitis D-like agents in vertebrates and invertebrates

scientific article published on 15 July 2019

Opportunistic sampling of wild native and invasive birds reveals a rich diversity of adenoviruses in Australia ⬇️

scientific article published on 01 January 2020

Persistent infections in immunocompromised hosts are rarely sources of new pathogen variants

scientific article published on 28 July 2017

Plasma-Derived HIV-1 Virions Contain Considerable Levels of Defective Genomes

scientific article published in 2022

Proposal for a unified classification system and nomenclature of lagoviruses

scientific article

Punctuated evolution of myxoma virus: rapid and disjunct evolution of a recent viral lineage in Australia

article

Rapid evolution of pandemic noroviruses of the GII.4 lineage

scientific article published in March 2010

Recombination within the pandemic norovirus GII.4 lineage

scientific article published on 27 March 2013

Redefining the invertebrate RNA virosphere

scientific article published on 23 November 2016

Resolving the Origin of Rabbit Hemorrhagic Disease Virus: Insights from an Investigation of the Viral Stocks Released in Australia

scientific article published on 16 September 2015

Revealing COVID-19 Transmission by SARS-CoV-2 Genome Sequencing and Agent Based Modelling

scientific article published on 22 April 2020

Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling

scientific article published on 09 July 2020

Reverse engineering field isolates of myxoma virus demonstrates that some gene disruptions or loss of function do not explain virulence changes observed in the field

scientific article published on 2 August 2017

The emergence and evolution of the novel epidemic norovirus GII.4 variant Sydney 2012.

scientific article published on 25 December 2013

The evolutionary history of vertebrate RNA viruses.

scientific article published on 4 April 2018

The paradox of HBV evolution as revealed from a 16th century mummy.

scientific article published on 4 January 2018

The transmission dynamics and diversity of human metapneumovirus in Peru.

scientific article published on 29 December 2017

Viral Discovery in the Invasive Australian Cane Toad (Rhinella marina) Using Metatranscriptomic and Genomic Approaches ⬇️

scientific article published in September 2018

Virological Sampling of Inaccessible Wildlife with Drones

article published in 2018

Virological Sampling of Inaccessible Wildlife with Drones

Virus-virus interactions and host ecology are associated with RNA virome structure in wild birds

article by Michelle Wille et al published 29 October 2018 in Molecular Ecology

List of works by John-Sebastian Eden

A Divergent Articulavirus in an Australian Gecko Identified Using Meta-Transcriptomics and Protein Structure Comparisons

A Divergent Hepatitis D-Like Agent in Birds

A Multi-Site Study of Norovirus Molecular Epidemiology in Australia and New Zealand, 2013-2014.

A Survey of a Mixed Species Aviary Provides New Insights into the Pathogenicity, Diversity, Evolution, Host Range, and Distribution of Psittacine and Passerine Adenoviruses

A complex mosaic of enteroviruses shapes community-acquired hand, foot and mouth disease transmission and evolution within a single hospital

A divergent hepatitis D-like agent in birds

A fluorescence-based high-throughput screen to identify small compound inhibitors of the genotype 3a hepatitis C virus RNA polymerase

Adaptive evolution of bat dipeptidyl peptidase 4 (dpp4): implications for the origin and emergence of Middle East respiratory syndrome coronavirus

Amplification of Near Full-length HIV-1 Proviruses for Next-Generation Sequencing

An emergent clade of SARS-CoV-2 linked to returned travellers from Iran

Author Correction: The evolutionary history of vertebrate RNA viruses

Benign Rabbit Caliciviruses Exhibit Evolutionary Dynamics Similar to Those of Their Virulent Relatives

Comparative Phylodynamics of Rabbit Hemorrhagic Disease Virus in Australia and New Zealand

Complete genome of the human norovirus GIV.1 strain Lake Macquarie virus

Contribution of intra- and interhost dynamics to norovirus evolution

Cross-validation to select Bayesian hierarchical models in phylogenetics

Diversity and Evolution of Novel Invertebrate DNA Viruses Revealed by Meta-Transcriptomics

Emergence and Adaptation of a Novel Highly Pathogenic H7N9 Influenza Virus in Birds and Humans from a 2013 Human-Infecting Low-Pathogenic Ancestor

Emergent multisystemic Enterococcus infection threatens endangered Christmas Island reptile populations

Emerging recombinant noroviruses identified by clinical and waste water screening.

Evolution of Human Respiratory Syncytial Virus (RSV) over Multiple Seasons in New South Wales, Australia

Evolution of Human Respiratory Syncytial Virus (RSV) over Multiple Seasons in New South Wales, Australia

Extensive Diversity of RNA Viruses in Australian Ticks

Extensive Diversity of RNA Viruses in Australian Ticks

Francisella tularensis ssp. holarctica in Ringtail Possums, Australia

Genetic diversity of SARS-CoV-2 and clinical, epidemiological characteristics of COVID-19 patients in Hanoi, Vietnam

Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in Australia.

Hepatitis C Virus Genotype 8 Infection-Successful Treatment With Sofosbuvir/Velpatasvir

High levels of antibiotic resistance gene expression among birds living in a wastewater treatment plant

High-Resolution Metatranscriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western Australia

Identification of Genetically Intact HIV-1 Proviruses in Specific CD4+ T Cells from Effectively Treated Participants.

Identification of diverse arthropod associated viruses in native Australian fleas

Interpret with caution: An evaluation of the commercial AusDiagnostics versus in-house developed assays for the detection of SARS-CoV-2 virus

Longitudinal Sequence and Functional Evolution within Glycoprotein E2 in Hepatitis C Virus Genotype 3a Infection

Meta-Transcriptomic Comparison of the RNA Viromes of the Mosquito Vectors Culex pipiens and Culex torrentium in Northern Europe

Meta-Transcriptomic Discovery of a Divergent Circovirus and a Chaphamaparvovirus in Captive Reptiles with Proliferative Respiratory Syndrome

Meta-Transcriptomic Identification of Divergent Amnoonviridae in Fish

Meta-transcriptomic analysis of virus diversity in urban wild birds with paretic disease

Meta-transcriptomics reveals a diverse antibiotic resistance gene pool in avian microbiomes

Metagenomic discovery and co-infection of diverse wobbly possum disease viruses and a novel hepacivirus in Australian brushtail possums

Metatranscriptomics as a tool to identify fungal species and subspecies in mixed communities

New insights into Sauropsid Papillomaviridae evolution and epizootiology: discovery of two novel papillomaviruses in native and invasive Island geckos ⬇️

No detectable effect of Mel on the prevalence and abundance of the RNA virome of

Nonnucleoside inhibitors of norovirus RNA polymerase: scaffolds for rational drug design

Norovirus GII.4 variant 2006b caused epidemics of acute gastroenteritis in Australia during 2007 and 2008.

Norovirus RNA-dependent RNA polymerase is phosphorylated by an important survival kinase, Akt

Novel hepaci- and pegi-like viruses in native Australian wildlife and non-human primates

Novel hepatitis D-like agents in vertebrates and invertebrates

Novel hepatitis D-like agents in vertebrates and invertebrates

Opportunistic sampling of wild native and invasive birds reveals a rich diversity of adenoviruses in Australia ⬇️

Persistent infections in immunocompromised hosts are rarely sources of new pathogen variants

Plasma-Derived HIV-1 Virions Contain Considerable Levels of Defective Genomes

Proposal for a unified classification system and nomenclature of lagoviruses

Punctuated evolution of myxoma virus: rapid and disjunct evolution of a recent viral lineage in Australia

Rapid evolution of pandemic noroviruses of the GII.4 lineage

Recombination within the pandemic norovirus GII.4 lineage

Redefining the invertebrate RNA virosphere

Resolving the Origin of Rabbit Hemorrhagic Disease Virus: Insights from an Investigation of the Viral Stocks Released in Australia

Revealing COVID-19 Transmission by SARS-CoV-2 Genome Sequencing and Agent Based Modelling

Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling

Reverse engineering field isolates of myxoma virus demonstrates that some gene disruptions or loss of function do not explain virulence changes observed in the field

The emergence and evolution of the novel epidemic norovirus GII.4 variant Sydney 2012.

The evolutionary history of vertebrate RNA viruses.

The paradox of HBV evolution as revealed from a 16th century mummy.

The transmission dynamics and diversity of human metapneumovirus in Peru.

Viral Discovery in the Invasive Australian Cane Toad (Rhinella marina) Using Metatranscriptomic and Genomic Approaches ⬇️

Virological Sampling of Inaccessible Wildlife with Drones

Virological Sampling of Inaccessible Wildlife with Drones

Virological Sampling of Inaccessible Wildlife with Drones

Virus-virus interactions and host ecology are associated with RNA virome structure in wild birds