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List of works by Dmitri Svergun

"4D Biology for health and disease" workshop report

scientific article published on 15 October 2010

19 A solution structure of the filarial nematode immunomodulatory protein, ES-62.

scientific article published on January 2003

2017 publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution: an update

scientific article published on 18 August 2017

3- Instead of 4-helix formation in a de novo designed protein in solution revealed by small-angle X-ray scattering

scientific article

3D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources

scientific article published in 2022

A General Small-Angle X-ray Scattering-Based Screening Protocol Validated for Protein-RNA Interactions

scientific article published on 19 March 2018

A Map of Protein-rRNA Distribution in the 70 SEscherichia coliRibosome

scientific article published in Journal of Biological Chemistry

A Molecular Envelope of the Ligand-Binding Domain of a Glutamate Receptor in the Presence and Absence of Agonist†

scientific article published in 1999

A Spring-Loaded Mechanism Governs the Clamp-like Dynamics of the Skp Chaperone

scientific article published on 10 June 2017

A common structural basis for pH- and calmodulin-mediated regulation in plant glutamate decarboxylase

scientific article

A conformational switch in collybistin determines the differentiation of inhibitory postsynapses

scientific article

A crescent-shaped ALIX dimer targets ESCRT-III CHMP4 filaments.

scientific article published on June 2009

A different conformation for EGC stator subcomplex in solution and in the assembled yeast V-ATPase: possible implications for regulatory disassembly

scientific article published on December 2008

A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding

scientific article published on 8 November 2011

A flexible multidomain structure drives the function of the urokinase-type plasminogen activator receptor (uPAR)

scientific article

A helical structural nucleus is the primary elongating unit of insulin amyloid fibrils

scientific article (publication date: May 2007)

A key structural role for active site type 3 copper ions in human ceruloplasmin

scientific article published on 12 August 2002

A macrocyclic HCV NS3/4A protease inhibitor interacts with protease and helicase residues in the complex with its full-length target

scientific article

A mechanism for histone chaperoning activity of nucleoplasmin: thermodynamic and structural models

scientific article published on 13 August 2009

A model of the quaternary structure of the Escherichia coli F1 ATPase from X-ray solution scattering and evidence for structural changes in the delta subunit during ATP hydrolysis

scientific article published on November 1998

A regular pattern of Ig super-motifs defines segmental flexibility as the elastic mechanism of the titin chain

scientific article

A structural basis for Staphylococcal complement subversion: X-ray structure of the complement-binding domain of Staphylococcus aureus protein Sbi in complex with ligand C3d

scientific article

A structural model of PpoA derived from SAXS-analysis-implications for substrate conversion

scientific article

A structure refinement protocol combining NMR residual dipolar couplings and small angle scattering restraints

scientific article published in August 2008

A study of the ultrastructure of fragile-X-related proteins

scientific article published on April 2009

A synchrotron radiation X-ray scattering study of aqueous solutions of native DNA

A weighted rotation function

scientific article published on 01 November 1997

ATSAS 2.8: a comprehensive data analysis suite for small-angle scattering from macromolecular solutions

scientific article published on 26 June 2017

Absence of equilibrium cluster phase in concentrated lysozyme solutions

scholarly article

Addition of missing loops and domains to protein models by x-ray solution scattering

scientific article published on December 2002

Advances in structure analysis using small-angle scattering in solution

scientific article

Allosteric competitive inactivation of hematopoietic CSF-1 signaling by the viral decoy receptor BARF1

scientific article

Analysis of X-ray and neutron scattering from biomacromolecular solutions

scientific article published on 21 August 2007

Analysis of intrinsically disordered proteins by small-angle X-ray scattering.

scientific article published in January 2012

Analysis of self-assembly of S-layer protein slp-B53 from Lysinibacillus sphaericus

scientific article

Anisotropic lanthanide-based nano-clusters for imaging applications

scientific article published on 18 July 2016

Applications of small-angle X-ray scattering to biomacromolecular solutions ⬇️

scientific article published on November 9, 2012

Atomic Structures of Two Novel Immunoglobulin-like Domain Pairs in the Actin Cross-linking Protein Filamin

scientific article

Biochemical and structural characterization of recombinant copper-metallothionein from Saccharomyces cerevisiae

scientific article published on 01 June 1999

Biophysical characterization of the unstructured cytoplasmic domain of the human neuronal adhesion protein neuroligin 3.

scientific article

Block and Gradient Copoly(2-oxazoline) Micelles: Strikingly Different on the Inside.

scientific article published on 31 July 2017

Btk SH2-kinase interface is critical for allosteric kinase activation and its targeting inhibits B-cell neoplasms

scientific article published on 08 May 2020

CHROMIXS: automatic and interactive analysis of chromatography-coupled small angle X-ray scattering data

scientific article published on 28 December 2017

Calcium-Driven Folding of RTX Domain β-Rolls Ratchets Translocation of RTX Proteins through Type I Secretion Ducts

scientific article

Casitas B-lineage lymphoma linker helix mutations found in myeloproliferative neoplasms affect conformation

scientific article

Ceruloplasmin: Macromolecular Assemblies with Iron-Containing Acute Phase Proteins

scientific article

Chaperoning of the histone octamer by the acidic domain of DNA repair factor APLF

Characterization of Der p 21, a new important allergen derived from the gut of house dust mites.

scientific article

Characterization of a fluorophore binding RNA aptamer by fluorescence correlation spectroscopy and small angle X-ray scattering

scientific article

Characterization of mAb dimers reveals predominant dimer forms common in therapeutic mAbs

scientific article

Combining NMR and small angle X-ray scattering for the study of biomolecular structure and dynamics.

scientific article published on 10 May 2017

Comment on “Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water”

scientific article published in Science

Common architecture of nuclear receptor heterodimers on DNA direct repeat elements with different spacings

scientific article

Communication between the nucleotide site and the main molecular hinge of 3-phosphoglycerate kinase

scientific article

Conformation of Polypyrimidine Tract Binding Protein in Solution

scientific article published on 01 June 2006

Conformation of full-length Bruton tyrosine kinase (Btk) from synchrotron X-ray solution scattering.

scientific article published in September 2003

Conformation of the Drosophila motor protein non-claret disjunctional in solution from X-ray and neutron scattering.

scientific article published on 2 May 2001

Conformational States of ABC Transporter MsbA in a Lipid Environment Investigated by Small-Angle Scattering Using Stealth Carrier Nanodiscs

scientific article published on 21 June 2018

Conformational Variability of Nucleo-cytoplasmic Transport Factors

scientific article published in Journal of Biological Chemistry

Conformational analysis of a genetically encoded FRET biosensor by SAXS.

scientific article

Conformational characterization of full-length X-chromosome-linked inhibitor of apoptosis protein (XIAP) through an integrated approach

scientific article published on 23 August 2019

Conformational plasticity of RepB, the replication initiator protein of promiscuous streptococcal plasmid pMV158.

scientific article published on 15 February 2016

Conformational plasticity of the essential membrane-associated mannosyltransferase PimA from mycobacteria.

scientific article published on 20 August 2013

Conformational space of flexible biological macromolecules from average data

scientific article

Consensus Bayesian assessment of protein molecular mass from solution X-ray scattering data

scientific article published on 8 May 2018

Crystal Structure of the CTP1L Endolysin Reveals How Its Activity Is Regulated by a Secondary Translation Product.

scientific article

Crystal structure and activity of Kunjin virus NS3 helicase; protease and helicase domain assembly in the full length NS3 protein

scientific article

Crystal structure of Pseudomonas aeruginosa Tsi2 reveals a stably folded superhelical antitoxin

scientific article

Crystal structure of hexokinase KlHxk1 of Kluyveromyces lactis: a molecular basis for understanding the control of yeast hexokinase functions via covalent modification and oligomerization

scientific article

Crystal structure of human filamin C domain 23 and small angle scattering model for filamin C 23-24 dimer

scientific article

Crystal structures of substrate-bound chitinase from the psychrophilic bacterium Moritella marina and its structure in solution

scientific article

CrystalVersusSolution Structures of Thiamine Diphosphate-dependent Enzymes

scientific article published in Journal of Biological Chemistry

Death-Associated Protein Kinase Activity Is Regulated by Coupled Calcium/Calmodulin Binding to Two Distinct Sites

scientific article published on 20 April 2016

Deciphering conformational transitions of proteins by small angle X-ray scattering and normal mode analysis

scientific article published on 27 November 2015

Decoupling of size and shape fluctuations in heteropolymeric sequences reconciles discrepancies in SAXS vs. FRET measurements

scientific article

Designing a multimer allergen for diagnosis and immunotherapy of dog allergic patients

scientific article

Determination of domain structure of proteins from X-ray solution scattering

scientific article

Dimerisation and an increase in active site aromatic groups as adaptations to high temperatures: X-ray solution scattering and substrate-bound crystal structures of Rhodothermus marinus endoglucanase Cel12A.

scientific article

Direct intracellular selection and biochemical characterization of a recombinant anti-proNGF single chain antibody fragment

scientific article

Direct shape determination of intermediates in evolving macromolecular solutions from small-angle scattering data

scholarly article by Petr V Konarev & Dmitri Svergun published 1 July 2018 in IUCrJ

Disease Variants of FGFR3 Reveal Molecular Basis for the Recognition and Additional Roles for Cdc37 in Hsp90 Chaperone System ⬇️

scientific article published on 16 February 2018

Dissecting NGF interactions with TrkA and p75 receptors by structural and functional studies of an anti-NGF neutralizing antibody

scientific article

Domain conformation of tau protein studied by solution small-angle X-ray scattering

scientific article published on 5 September 2008

Dynamics in a pure encounter complex of two proteins studied by solution scattering and paramagnetic NMR spectroscopy

scientific article

Engineered synthetic virus-like particles and their use in vaccine delivery

scientific article published in January 2011

Engineering the NK1 fragment of hepatocyte growth factor/scatter factor as a MET receptor antagonist

scientific article

Epsin and Sla2 form assemblies through phospholipid interfaces

scientific article published on 23 January 2018

Escherichia coli SecA shape and dimensions

scientific article published on 01 October 1998

Essential role of the metal-ion in the IPM-assisted domain closure of 3-isopropylmalate dehydrogenase

scientific article

Evidence for a dimeric assembly of two titin/telethonin complexes induced by the telethonin C-terminus

scientific article (publication date: August 2006)

Evidence for a major structural change in Escherichia coli chorismate synthase induced by flavin and substrate binding

scientific article

Evidence for an elongated dimeric structure of heparin-binding hemagglutinin from Mycobacterium tuberculosis

scientific journal article

Evidence for major structural changes in the Manduca sexta midgut V1 ATPase due to redox modulation. A small angle X-ray scattering study

scientific article published on September 2000

Evidence of reciprocal reorientation of the catalytic and hemopexin-like domains of full-length MMP-12

scientific article

Examination of matrix metalloproteinase-1 in solution: a preference for the pre-collagenolysis state.

scientific article published on 11 September 2013

Exploring RNA oligomerization and ligand binding by fluorescence correlation spectroscopy and small angle X-ray scattering

scientific article published in January 2014

Extension of the sasCIF format and its applications for data processing and deposition

scientific article

Extensive small-angle X-ray scattering studies of blood coagulation factor VIIa reveal interdomain flexibility

scientific article published on 20 October 2010

Extracellular complexes of the hematopoietic human and mouse CSF-1 receptor are driven by common assembly principles

scientific article published on December 2011

Fab MOR03268 triggers absorption shift of a diagnostic dye via packaging in a solvent-shielded Fab dimer interface

scientific article

Ferredoxin competes with bacterial frataxin in binding to the desulfurase IscS.

scientific article

Fine-tuning of intrinsic N-Oct-3 POU domain allostery by regulatory DNA targets

scientific article published on 18 June 2007

Flexibility of the linker between the domains of DNA methyltransferase SsoII revealed by small-angle X-ray scattering: implications for transcription regulation in SsoII restriction-modification system.

scientific article

Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins

scientific article

Formation of a Secretion-Competent Protein Complex by a Dynamic Wrap-around Binding Mechanism

scientific article published on 02 August 2018

Four distinct structural domains in Clostridium difficile toxin B visualized using SAXS.

scientific article

Functional interaction of low-homology FRPs from different cyanobacteria with Synechocystis OCP

Functional interaction of low-homology FRPs from different cyanobacteria with Synechocystis OCP.

scientific article published on 7 March 2018

Functional polymer colloids with ordered interior

scientific article

Global rigid body modeling of macromolecular complexes against small-angle scattering data

scientific article

High concentration formulation studies of an IgG2 antibody using small angle X-ray scattering

scientific article published on 3 April 2012

Highly selective tungstate transporter protein TupA from Desulfovibrio alaskensis G20.

scientific article

Human IL-34 and CSF-1 establish structurally similar extracellular assemblies with their common hematopoietic receptor

scientific article

Human MICAL1: activation by the small GTPase Rab8 and small-angle X-ray scattering studies on the oligomerization state of MICAL1 and its complex with Rab8

scientific article published on 31 October 2018

Human platelet 12-lipoxygenase, new findings about its activity, membrane binding and low-resolution structure

scientific article published on 4 December 2007

Hydrolytically degradable polymer micelles for drug delivery: a SAXS/SANS kinetic study

scientific article published on 25 October 2013

Hydrophilic Monodisperse Magnetic Nanoparticles Protected by an Amphiphilic Alternating Copolymer

scientific article published on January 2008

Hydrophilization of Magnetic Nanoparticles with Modified Alternating Copolymers. Part 1: The Influence of the Grafting

scientific article published on December 2010

Hydrophilization of Magnetic Nanoparticles with Modified Alternating Copolymers. Part 2: Behavior in solution

scientific article published on December 2010

Immunosuppressive Yersinia Effector YopM Binds DEAD Box Helicase DDX3 to Control Ribosomal S6 Kinase in the Nucleus of Host Cells

scientific article

Impact and progress in small and wide angle X-ray scattering (SAXS and WAXS) ⬇️

scientific article published on 05 July 2013

Influenza virus Matrix Protein M1 preserves its conformation with pH, changing multimerization state at the priming stage due to electrostatics.

scientific article published in December 2017

Inhibition of master transcription factors in pluripotent cells induces early stage differentiation

scientific article published on 16 January 2014

Insights into complement convertase formation based on the structure of the factor B-cobra venom factor complex

scientific article

Insights into signal transduction revealed by the low resolution structure of the FixJ response regulator

scientific article

Insights into the molecular activation mechanism of the RhoA-specific guanine nucleotide exchange factor, PDZRhoGEF.

scientific article

Integrated beamline control and data acquisition for small-angle X-ray scattering at the P12 BioSAXS beamline at PETRAIII storage ring DESY.

scientific article

Interaction between the C-terminal region of human myelin basic protein and calmodulin: analysis of complex formation and solution structure

scientific article

Interaction of human 3-phosphoglycerate kinase with L-ADP, the mirror image of D-ADP.

scientific article

Interaction of human complement with Sbi, a staphylococcal immunoglobulin-binding protein: indications of a novel mechanism of complement evasion by Staphylococcus aureus

scientific article

Interactions of ataxin-3 with its molecular partners in the protein machinery that sorts protein aggregates to the aggresome

scientific article published on 28 March 2014

Interdomain flexibility in full-length matrix metalloproteinase-1 (MMP-1).

scientific article published on 12 March 2009

Intrinsic structural disorder of mouse proNGF.

scientific article published in June 2009

Isolation and oligomeric composition of cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens

article

Joint use of small-angle X-ray and neutron scattering to study biological macromolecules in solution

scientific article published on 25 April 2006

Kinetic and mechanistic characterization of Mycobacterium tuberculosis glutamyl-tRNA synthetase and determination of its oligomeric structure in solution

scientific article published in March 2009

LabDisk for SAXS: a centrifugal microfluidic sample preparation platform for small-angle X-ray scattering.

scientific article

Large differences are observed between the crystal and solution quaternary structures of allosteric aspartate transcarbamylase in the R state

scientific article published on 01 January 1997

Large-scale movement of functional domains facilitates aminoacylation by human mitochondrial phenylalanyl-tRNA synthetase

scientific article published on 6 September 2009

Ligand-Binding Properties and Conformational Dynamics of Autolysin Repeat Domains in Staphylococcal Cell Wall Recognition

scientific article

Ligand-induced formation of transient dimers of mammalian 12/15-lipoxygenase: a key to allosteric behavior of this class of enzymes?

scientific article published on 21 December 2011

Looking behind the Beamstop: X-Ray Solution Scattering Studies of Structure and Conformational Changes of Biological Macromolecules

scientific article published on 01 January 2003

Low Resolution Structure of the ς54 Transcription Factor Revealed by X-ray Solution Scattering

scientific article published in Journal of Biological Chemistry

Low resolution structural models of the basic helix-loop-helix leucine zipper domain of upstream stimulatory factor 1 and its complexes with DNA from small angle X-ray scattering data

scientific article

Low resolution structure determination shows procollagen C-proteinase enhancer to be an elongated multidomain glycoprotein.

scientific article

Low-Resolution Structure of the Proteolytic Fragments of the Rapana venosa Hemocyanin in Solution

scientific article published in 2000

Low-resolution structure of a vesicle disrupting α-synuclein oligomer that accumulates during fibrillation

scientific article

Low-resolution structures of transient protein-protein complexes using small-angle X-ray scattering.

scientific article published in April 2009

Machine Learning Methods for X-Ray Scattering Data Analysis from Biomacromolecular Solutions

scientific article published on 01 June 2018

Macromolecular HPMA-based nanoparticles with cholesterol for solid-tumor targeting: detailed study of the inner structure of a highly efficient drug delivery system

scientific article published in August 2012

Macromolecular pHPMA-Based Nanoparticles with Cholesterol for Solid Tumor Targeting: Behavior in HSA Protein Environment

scientific article

Matrix proteins of enveloped viruses: a case study of Influenza A virus M1 protein.

scientific article published in February 2018

MaxOcc: a web portal for maximum occurrence analysis

scientific article published on 26 May 2012

Metal-mediated self-assembly of a beta-sandwich protein

scientific article

Metalated Diblock and Triblock Poly(ethylene oxide)-block-poly(4-vinylpyridine) Copolymers: Understanding of Micelle and Bulk Structure

scientific article published on 01 October 2005

Mixed Co/Fe Oxide Nanoparticles in Block Copolymer Micelles

scientific article published on 02 October 2008

Molecular analysis and solution structure from small-angle X-ray scattering of the human natural killer inhibitory receptor IRp60 (CD300a).

scientific article

Molecular basis of the C-terminal tail-to-tail assembly of the sarcomeric filament protein myomesin

scientific article

Molecular insights into the self-assembly mechanism of dystrophia myotonica kinase

scientific article published on June 2006

Molecular shape and prominent role of beta-strand swapping in organization of dUTPase oligomers

scientific article

Monitoring intermediate filament assembly by small-angle x-ray scattering reveals the molecular architecture of assembly intermediates

scientific article

Multi-channel in situ dynamic light scattering instrumentation enhancing biological small-angle X-ray scattering experiments at the PETRA III beamline P12.

scientific article published on 13 February 2018

Multicore Iron Oxide Mesocrystals Stabilized by a Poly(phenylenepyridyl) Dendron and Dendrimer: Role of the Dendron/Dendrimer Self-Assembly

article

Multiple Assembly States of Lumazine Synthase: A Model Relating Catalytic Function and Molecular Assembly

article

Nonaggregating mutant of recombinant human hexokinase I exhibits wild-type kinetics and rod-like conformations in solution

scientific article

Nonstructural Proteins 7 and 8 of Feline Coronavirus Form a 2:1 Heterotrimer That Exhibits Primer-Independent RNA Polymerase Activity

scientific article

Oligomerization Propensity and Flexibility of Yeast Frataxin Studied by X-ray Crystallography and Small-Angle X-ray Scattering

scientific article

Optical and Structural Characterization of a Chronic Myeloid Leukemia DNA Biosensor

scientific article published on 21 March 2018

Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop

scientific article published on 18 June 2015

Plant Transformation by Agrobacterium tumefaciens: MODULATION OF SINGLE-STRANDED DNA-VirE2 COMPLEX ASSEMBLY BY VirE1

scientific article published in Journal of Biological Chemistry

Platinum nanoparticles generated in functionality-enhanced reaction media based on polyoctadecylsiloxane with long-chain functional modifiers

scientific article published in May 2004

Poly-Ig tandems from I-band titin share extended domain arrangements irrespective of the distinct features of their modular constituents

scientific article

Potent and selective bivalent inhibitors of BET bromodomains.

scientific article

Preparing monodisperse macromolecular samples for successful biological small-angle X-ray and neutron-scattering experiments.

scientific article

Probing Dimerization and Structural Flexibility of Mammalian Lipoxygenases by Small-Angle X-ray Scattering

scientific article published on 20 April 2011

Probing the Architecture of a Multi-PDZ Domain Protein: Structure of PDZK1 in Solution

scientific article published on 13 September 2018

Progress in small-angle scattering from biological solutions at high-brilliance synchrotrons

scientific article published on 8 August 2017

Protein hydration in solution: Experimental observation by x-ray and neutron scattering ⬇️

scientific article published on March 3, 1998

Proteins involved in sleep homeostasis: Biophysical characterization of INC and its partners.

scientific article published on 24 September 2016

Prp19/Pso4 Is an Autoinhibited Ubiquitin Ligase Activated by Stepwise Assembly of Three Splicing Factors

scientific article published in March 2018

Publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution ⬇️

scientific article published on May 17, 2012

Quantitative 3D determination of self-assembled structures on nanoparticles using small angle neutron scattering

scientific article published on 9 April 2018

Quaternary structure of Azospirillum brasilense NADPH-dependent glutamate synthase in solution as revealed by synchrotron radiation x-ray scattering

scientific article published on 30 May 2003

Quaternary structure of V1 and F1 ATPase: significance of structural homologies and diversities

scientific article published on December 1998

Quaternary structure of flavorubredoxin as revealed by synchrotron radiation small-angle X-ray scattering.

scientific article published in September 2008

Quaternary structure of human, Drosophila melanogaster and Caenorhabditis elegans MFE-2 in solution from synchrotron small-angle X-ray scattering.

scientific article published on 8 January 2013

Quaternary structure of the human Cdt1-Geminin complex regulates DNA replication licensing

scientific article

Quaternary structure of the yeast Arc1p-aminoacyl-tRNA synthetase complex in solution and its compaction upon binding of tRNAs

scientific article

Quaternary structures of tumor suppressor p53 and a specific p53 DNA complex

scientific article

Rapid automated superposition of shapes and macromolecular models using spherical harmonics

scientific article

Rapid screening of in cellulo grown protein crystals via a small-angle X-ray scattering/X-ray powder diffraction synergistic approach

scientific article published on 25 September 2020

Recombinant production of A1S_0222 from Acinetobacter baumannii ATCC 17978 and confirmation of its DNA-(adenine N6)-methyltransferase activity

scientific article published on 22 June 2018

Reconstruction of quaternary structure from X-ray scattering by equilibrium mixtures of biological macromolecules

scientific article published on 19 September 2013

Release Factors 2 from Escherichia coli and Thermus thermophilus: structural, spectroscopic and microcalorimetric studies

scientific article

Report of the wwPDB Small-Angle Scattering Task Force: data requirements for biomolecular modeling and the PDB.

scientific article

Resolution of ab initio shapes determined from small-angle scattering

scientific article published on 27 October 2016

Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing

scientific article

Rigidity, conformation, and solvation of native and oxidized tannin macromolecules in water-ethanol solution.

scientific article published in June 2009

Role of side-chains in the operation of the main molecular hinge of 3-phosphoglycerate kinase

scientific article

SASBDB, a repository for biological small-angle scattering data.

scientific article

SASBDB: Towards an automatically curated and validated repository for biological scattering data

scientific article published on 11 October 2019

SASpy: a PyMOL plugin for manipulation and refinement of hybrid models against small angle X-ray scattering data

scientific article

Saposin Lipid Nanoparticles: A Highly Versatile and Modular Tool for Membrane Protein Research

scientific article published in February 2018

Selection, biophysical and structural analysis of synthetic nanobodies that effectively neutralize SARS-CoV-2

scientific article published on 04 November 2020

Selective deuteration of tryptophan and methionine residues in maltose binding protein: a model system for neutron scattering

scientific article

Self-Assembly and Conformational Heterogeneity of the AXH Domain of Ataxin-1: An Unusual Example of a Chameleon Fold

scientific article

Self-assembly and regulation of protein cages from pre-organised coiled-coil modules

scientific article published on 11 February 2021

Signaling ammonium across membranes through an ammonium sensor histidine kinase

scientific article published on 11 January 2018

Simulation of small-angle X-ray scattering data of biological macromolecules in solution

scientific article published on 18 February 2020

Small angle X-ray studies reveal that Aspergillus niger glucoamylase has a defined extended conformation and can form dimers in solution

scientific article

Small-Angle X-ray Solution-Scattering Studies on Ligand-Induced Subunit Interactions of the Thiamine Diphosphate Dependent Enzyme Pyruvate Decarboxylase from Different Organisms ⬇️

scientific article published on April 14, 1998

Small-angle X-ray Scattering Study of a Rex Family Repressor: Conformational Response to NADH and NAD+ Binding in Solution

article

Small-angle X-ray and neutron scattering as a tool for structural systems biology

scientific article published on July 2010

Small-angle X-ray scattering on biological macromolecules and nanocomposites in solution

scientific article published on 03 December 2012

Small-angle scattering: a view on the properties, structures and structural changes of biological macromolecules in solution

scientific article

Smaller capillaries improve the small-angle X-ray scattering signal and sample consumption for biomacromolecular solutions

Solution Behavior of the Intrinsically Disordered N-Terminal Domain of Retinoid X Receptor α in the Context of the Full-Length Protein

scientific article published on 03 March 2016

Solution Structure and Conformational Changes of theStreptomycesChitin-Binding Protein (CHB1)†

scientific article published on 01 September 2000

Solution Structure of CCP Modules 10–12 Illuminates Functional Architecture of the Complement Regulator, Factor H

scientific article

Solution Structures of PPARγ2/RXRα Complexes

scientific article published on 18 December 2012

Solution X-ray scattering evidence for agonist- and antagonist-induced modulation of cleft closure in a glutamate receptor ligand-binding domain

scientific article

Solution model of the intrinsically disordered polyglutamine tract-binding protein-1.

scientific article published on 3 April 2012

Solution scattering structural analysis of the 70 S Escherichia coli ribosome by contrast variation. I. Invariants and validation of electron microscopy models.

scientific article

Solution scattering structural analysis of the 70 S Escherichia coli ribosome by contrast variation. II. A model of the ribosome and its RNA at 3.5 nm resolution.

scientific article

Solution scattering suggests cross-linking function of telethonin in the complex with titin

scientific article (publication date: 24 January 2003)

Solution structure and flexibility of the condensin HEAT-repeat subunit Ycg1

scientific article published on 26 July 2019

Solution structure of human Pex5.Pex14.PTS1 protein complexes obtained by small angle X-ray scattering

scientific article

Solution structure of poly(ethylene) glycol-conjugated hemoglobin revealed by small-angle X-ray scattering: implications for a new oxygen therapeutic

scientific article

Solution structure of the soluble receptor for advanced glycation end products (sRAGE).

scientific article published on 23 August 2011

Solution structure of the ternary complex between aminoacyl-tRNA, elongation factor Tu, and guanosine triphosphate.

scientific article

Staphylococcus aureus thiaminase II: oligomerization warrants proteolytic protection against serine proteases

scientific article published on 19 November 2013

Structural Basis for Draxin-Modulated Axon Guidance and Fasciculation by Netrin-1 through DCC.

scientific article published in March 2018

Structural Basis of Dcp2 Recognition and Activation by Dcp1

scientific article

Structural Characterization of the Ribosomal P1A−P2B Protein Dimer by Small-Angle X-ray Scattering and NMR Spectroscopy†

scientific article published on 30 January 2007

Structural Insight into How Streptomyces coelicolor Maltosyl Transferase GlgE Binds α-Maltose 1-Phosphate and Forms a Maltosyl-enzyme Intermediate

scientific article

Structural Insights into the A1ATPase from the Archaeon,Methanosarcina mazeiGö1†

scientific article published on 01 February 2001

Structural Insights into the Polyphyletic Origins of Glycyl tRNA Synthetases

scientific article published on 23 May 2016

Structural Properties of AMP-activated Protein Kinase

scientific article published in Journal of Biological Chemistry

Structural Relationships Among the Ribosomal Stalk Proteins from the Three Domains of Life

scientific article published on 09 July 2008

Structural analysis of influenza A virus matrix protein M1 and its self-assemblies at low pH.

scientific article

Structural analysis of intrinsically disordered proteins by small-angle X-ray scattering

scientific article published on 22 September 2011

Structural analysis of monomeric retroviral reverse transcriptase in complex with an RNA/DNA hybrid

scientific article

Structural analysis of the C-terminal region (modules 18-20) of complement regulator factor H (FH)

scientific article published in 2012

Structural analysis of the SRP Alu domain from Plasmodium falciparum reveals a non-canonical open conformation

scientific article published in 2021

Structural analysis of the stalk subunit Vma5p of the yeast V-ATPase in solution.

scientific article

Structural and Functional Insights into Peptidoglycan Access for the Lytic Amidase LytA of Streptococcus pneumoniae

scientific article

Structural and Functional Integration of the PLCγ Interaction Domains Critical for Regulatory Mechanisms and Signaling Deregulation

scientific article

Structural and Mutational Analysis of Substrate Complexation by Anthranilate Phosphoribosyltransferase from Sulfolobus solfataricus

scientific article published in Journal of Biological Chemistry

Structural and biophysical characterization of the proteins interacting with the herpes simplex virus 1 origin of replication

scientific article published on 27 March 2009

Structural and functional characterization of soluble endoglin receptor

scientific article published on 5 March 2009

Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase

scientific article published on 13 December 2017

Structural and functional insights into a dodecameric molecular machine - the RuvBL1/RuvBL2 complex

scientific article

Structural and functional properties of mouse proNGF.

scientific article

Structural bases for the interaction of frataxin with the central components of iron-sulphur cluster assembly

scientific article published on 19 October 2010

Structural basis for autoinhibition of ESCRT-III CHMP3

scientific article

Structural basis for engagement by complement factor H of C3b on a self surface

scientific article

Structural basis for sugar recognition, including the Tn carcinoma antigen, by the lectin SNA-II from Sambucus nigra

scientific article

Structural basis of hepatocyte growth factor/scatter factor and MET signalling

scholarly article

Structural basis of the interaction between the putative adhesion-involved and iron-regulated FrpD and FrpC proteins of Neisseria meningitidis

scientific article published on 13 January 2017

Structural characterization of T-protein of the Escherichia coli glycine cleavage system by X-ray small angle scattering

scientific article published in January 2003

Structural characterization of beta-sheeted oligomers formed on the pathway of oxidative prion protein aggregation in vitro

scientific article published on 21 July 2006

Structural characterization of gephyrin by AFM and SAXS reveals a mixture of compact and extended states

scientific article

Structural characterization of protein-protein complexes by integrating computational docking with small-angle scattering data

scientific article

Structural characterization of proteins and complexes using small-angle X-ray solution scattering.

scientific article published on 15 June 2010

Structural characterization of the active and inactive states of Src kinase in solution by small-angle X-ray scattering.

scientific article published on 28 November 2007

Structural characterization of the multidomain regulatory protein Rv1364c from Mycobacterium tuberculosis

scientific article published on January 2011

Structural characterization of the nonameric assembly of an Archaeal alpha-L-fucosidase by synchrotron small angle X-ray scattering

scientific article published in July 2004

Structural characterization of unphosphorylated STAT5a oligomerization equilibrium in solution by small-angle X-ray scattering.

scientific article published on April 2009

Structural complexity of the co-chaperone SGTA: a conserved C-terminal region is implicated in dimerization and substrate quality control.

scientific article published on 11 July 2018

Structural data on the periplasmic aldehyde oxidoreductase PaoABC from Escherichia coli: SAXS and preliminary X-ray crystallography analysis ⬇️

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Structural determinants and mechanism of mammalian CRM1 allostery

scientific article published on 11 July 2013

Structural features of the single-stranded DNA-binding protein of Epstein-Barr virus

scientific article published in November 2007

Structural flexibility of RNA as molecular basis for Hfq chaperone function

scientific article published on 19 June 2012

Structural insights into eRF3 and stop codon recognition by eRF1

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Structural insights into the extracellular assembly of the hematopoietic Flt3 signaling complex

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Structural insights into the mechanism of phosphoregulation of the retinoblastoma protein

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Structural insights into the molecular organization of the S-layer from Clostridium difficile

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Structural insights into the regulatory mechanism of the response regulator RocR from Pseudomonas aeruginosa in cyclic Di-GMP signaling

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Structural insights of RmXyn10A - A prebiotic-producing GH10 xylanase with a non-conserved aglycone binding region

scientific article published on 14 November 2017

Structural memory of natively unfolded tau protein detected by small-angle X-ray scattering

scientific article published on 10 May 2011

Structural model of human dUTPase in complex with a novel proteinaceous inhibitor.

scientific article published on 12 March 2018

Structural model of the 50S subunit of E. coli ribosomes from solution scattering

article

Structural reorganization of the chromatin remodeling enzyme Chd1 upon engagement with nucleosomes.

scientific article published on 23 March 2017

Structural role of essential light chains in the apicomplexan glideosome

scientific article published on 13 October 2020

Structural studies on the enzyme complex isopropylmalate isomerase (LeuCD) from Mycobacterium tuberculosis

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Structural variations in the catalytic and ubiquitin-associated domains of microtubule-associated protein/microtubule affinity regulating kinase (MARK) 1 and MARK2.

scientific article published on 27 June 2006

Structuralization of magnetic nanoparticles in 5CB liquid crystals

scientific article published on 12 October 2017

Structure and Dynamics of Ribosomal Protein L12: An Ensemble Model Based on SAXS and NMR Relaxation

scientific article published on May 2010

Structure and RNA Interactions of the N-Terminal RRM Domains of PTB

scientific article published on 01 September 2004

Structure and target interaction of a G-quadruplex RNA-aptamer

scientific article published on 29 July 2016

Structure of ThiM from Vitamin B1 biosynthetic pathway of Staphylococcus aureus - Insights into a novel pro-drug approach addressing MRSA infections

scientific article

Structure of a Beheaded 30S Ribosomal Subunit from Thermus thermophilus

Structure of free Thermus flavus 5 S rRNA at 1.3 nm resolution from synchrotron X-ray solution scattering

scientific article published in October 2000

Structure of the C. elegans ZYG-1 Cryptic Polo Box Suggests a Conserved Mechanism for Centriolar Docking of Plk4 Kinases

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Structure of the Lassa virus nucleoprotein revealed by X-ray crystallography, small-angle X-ray scattering, and electron microscopy

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Structure of the mycobacterial ESX-5 type VII secretion system membrane complex by single-particle analysis.

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Structure validation of the Josephin domain of ataxin-3: conclusive evidence for an open conformation

scientific article published on 10 November 2006

Structure-specific recognition protein-1 (SSRP1) is an elongated homodimer that binds histones.

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Studies on structure-function relationships of indolepyruvate decarboxylase from Enterobacter cloacae, a key enzyme of the indole acetic acid pathway

scientific article published in May 2003

Studies on the conformational changes in the bacterial cell wall biosynthetic enzyme UDP-N-acetylglucosamine enolpyruvyltransferase (MurA).

scientific article published on April 1998

Substrate-induced double sided H-bond network as a means of domain closure in 3-phosphoglycerate kinase

scientific article published on 21 April 2006

Superhelical architecture of the myosin filament-linking protein myomesin with unusual elastic properties

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Synergistic use of synchrotron radiation techniques for biological samples in solution: a case study on protein-ligand recognition by the peroxisomal import receptor Pex5p.

scientific article published on 22 October 2004

Tetrameric Structures of Inorganic CBS-Pyrophosphatases from Various Bacterial Species Revealed by Small-Angle X-ray Scattering in Solution

scientific article published on 07 April 2020

The 11th International Conference on Biology and Synchrotron Radiation

scientific article published on 3 December 2013

The BR domain of PsrP interacts with extracellular DNA to promote bacterial aggregation; structural insights into pneumococcal biofilm formation

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The C-terminal domain of the transcriptional corepressor CtBP is intrinsically unstructured

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The C-terminal random coil region tunes the Ca²⁺-binding affinity of S100A4 through conformational activation

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The CD27L and CTP1L Endolysins Targeting Clostridia Contain a Built-in Trigger and Release Factor

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The Dimer Interface of the Membrane Type 1 Matrix Metalloproteinase Hemopexin Domain: CRYSTAL STRUCTURE AND BIOLOGICAL FUNCTIONS

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The HC fragment of tetanus toxin forms stable, concentration-dependent dimers via an intermolecular disulphide bond

scientific article published on 23 September 2006

The Ig doublet Z1Z2: a model system for the hybrid analysis of conformational dynamics in Ig tandems from titin

scientific article published on September 2006

The Molecular Bases of the Dual Regulation of Bacterial Iron Sulfur Cluster Biogenesis by CyaY and IscX.

scientific article published in January 2017

The Molecular Basis of Iron-induced Oligomerization of Frataxin and the Role of the Ferroxidation Reaction in Oligomerization

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The PHD and chromo domains regulate the ATPase activity of the human chromatin remodeler CHD4

scientific article published on 7 May 2012

The SAXS solution structure of RF1 differs from its crystal structure and is similar to its ribosome bound cryo-EM structure

scientific article published on December 2005

The SH2 domain of Abl kinases regulates kinase autophosphorylation by controlling activation loop accessibility

scientific article published on 17 November 2014

The Shigella Virulence Factor IcsA Relieves N-WASP Autoinhibition by Displacing the Verprolin Homology/Cofilin/Acidic (VCA) Domain

scientific article published on 23 November 2016

The Vibrio cholerae Colonization Factor GbpA Possesses a Modular Structure that Governs Binding to Different Host Surfaces

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The active conformation of glutamate synthase and its binding to ferredoxin

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The asymmetric binding of PGC-1α to the ERRα and ERRγ nuclear receptor homodimers involves a similar recognition mechanism

scientific article published on 09 July 2013

The basic keratin 10-binding domain of the virulence-associated pneumococcal serine-rich protein PsrP adopts a novel MSCRAMM fold

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The catalytic core of an archaeal 2-oxoacid dehydrogenase multienzyme complex is a 42-mer protein assembly

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The central portion of factor H (modules 10-15) is compact and contains a structurally deviant CCP module

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The crystal and solution structure of a putative transcriptional antiterminator from Mycobacterium tuberculosis

scientific journal article

The crystal and solution structures of glyceraldehyde-3-phosphate dehydrogenase reveal different quaternary structures

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The crystal and solution studies of glucosamine-6-phosphate synthase from Candida albicans

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The crystal structure of netrin-1 in complex with DCC reveals the bifunctionality of netrin-1 as a guidance cue.

scientific article

The dimeric ectodomain of the alkali-sensing insulin receptor-related receptor (ectoIRR) has a droplike shape

scientific article published on 15 October 2019

The flexibility of a homeodomain transcription factor heterodimer and its allosteric regulation by DNA binding

scientific article published on 8 July 2016

The histone chaperones Vps75 and Nap1 form ring-like, tetrameric structures in solution.

scientific article

The impact of protein characterization in structural proteomics.

scientific article

The overall conformation of conventional kinesins studied by small angle X-ray and neutron scattering

scientific article published in January 2001

The quaternary structure of amalgam, a Drosophila neuronal adhesion protein, explains its dual adhesion properties

scientific article published on October 2009

The role of hydration in protein stability: comparison of the cold and heat unfolded states of Yfh1.

scientific article

The solution structure and dynamics of the DH-PH module of PDZRhoGEF in isolation and in complex with nucleotide-free RhoA.

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The structural basis of signal transduction for the response regulator PrrA from Mycobacterium tuberculosis

scientific journal article

The structure and binding behavior of the bacterial cell surface layer protein SbsC

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The structure of a full-length response regulator from Mycobacterium tuberculosis in a stabilized three-dimensional domain-swapped, activated state

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The structure of the FnIII Tandem A77-A78 points to a periodically conserved architecture in the myosin-binding region of titin

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The structure of the unliganded extracellular domain of the interleukin-6 signal transducer gp130 in solution

scientific article published on 30 October 2010

The subnanometer resolution structure of the glutamate synthase 1.2-MDa hexamer by cryoelectron microscopy and its oligomerization behavior in solution: functional implications

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The switch that does not flip: the blue-light receptor YtvA from Bacillus subtilis adopts an elongated dimer conformation independent of the activation state as revealed by a combined AUC and SAXS study

scientific article published on 25 August 2010

The three-dimensional structure of diaminopimelate decarboxylase from Mycobacterium tuberculosis reveals a tetrameric enzyme organisation

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Using stable MutS dimers and tetramers to quantitatively analyze DNA mismatch recognition and sliding clamp formation

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Utilisation of staphylococcal immune evasion protein Sbi as a novel vaccine adjuvant

Virus Matryoshka: A Bacteriophage Particle-Guided Molecular Assembly Approach to a Monodisperse Model of the Immature Human Immunodeficiency Virus.

scientific article published on 16 September 2016

Weak protein-ligand interactions studied by small-angle X-ray scattering

scientific article published on 19 March 2014

Why are the 2-oxoacid dehydrogenase complexes so large? Generation of an active trimeric complex

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X-Ray Solution Scattering Study of Four Escherichia coli Enzymes Involved in Stationary-Phase Metabolism

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X-ray and neutron small-angle scattering analysis of the complex formed by the Met receptor and the Listeria monocytogenes invasion protein InlB.

scientific article published on 16 January 2008

X-ray snapshots of peptide processing in mutants of tricorn-interacting factor F1 from Thermoplasma acidophilum

scientific article published in July 2005

pE-DB: a database of structural ensembles of intrinsically disordered and of unfolded proteins

scientific article

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